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PDB: 162 results

6EHB
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OmpU, an outer membrane protein, of Vibrio cholerae
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein U
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
4RL8
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Crystal structure of the COG4313 outer membrane channel from Pseudomonas putida F1
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, PHOSPHATE ION, Protein involved in meta-pathway of phenol degradation-like protein
Authors:van den Berg, B.
Deposit date:2014-10-16
Release date:2015-07-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a COG4313 outer membrane channel.
Sci Rep, 5, 2015
6EHC
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OmpUdeltaN (N-terminus deletion mutant of OmpU), outer membrane protein of Vibrio cholerae
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein U
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
6EHF
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BU of 6ehf by Molmil
OmpT (in-vitro folded), an outer membrane protein Vibrio cholerae (trimer form)
Descriptor: CALCIUM ION, OmpT protein
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
6EHD
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BU of 6ehd by Molmil
OmpT (in-vitro folded), an outer membrane protein of Vibrio cholerae
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, OmpT protein
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
6ENE
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BU of 6ene by Molmil
OmpF orthologue from Enterobacter cloacae (OmpE35)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein (Porin), SULFATE ION, ...
Authors:van den Berg, B, Abellon-Ruiz, J, Basle, A.
Deposit date:2017-10-04
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins.
Acs Infect Dis., 4, 2018
6EJ6
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BU of 6ej6 by Molmil
Crystal structure of the N240A mutant of Candida albicans Mep2
Descriptor: Ammonium transporter
Authors:van den Berg, B.
Deposit date:2017-09-20
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the N240A mutant of Candida albicans Mep2
To Be Published
6EHE
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BU of 6ehe by Molmil
OmpTdeltaL8 (loop L8 deletion mutant of OmpT), an outer membrane protein of Vibrio cholerae
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ACETATE ION, MAGNESIUM ION, ...
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.312 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
3SYB
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BU of 3syb by Molmil
Crystal structure of Pseudomonas aeruginosa OccD3 (OpdP)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Glycine-glutamate dipeptide porin OpdP, SULFATE ION
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-16
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3T24
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Crystal structure of Pseudomonas aeruginosa OpdQ
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, porin
Authors:van den Berg, B, Eren, E.
Deposit date:2011-07-22
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
4GEY
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BU of 4gey by Molmil
High pH structure of Pseudomonas putida OprB
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, DECYL-BETA-D-MALTOPYRANOSIDE, PHOSPHATE ION, ...
Authors:van den Berg, B.
Deposit date:2012-08-02
Release date:2012-10-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for outer membrane sugar uptake in pseudomonads.
J.Biol.Chem., 287, 2012
4FMS
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BU of 4fms by Molmil
Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF) in complex with glucuronate
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Probable porin, ...
Authors:van den Berg, B, Eren, E.
Deposit date:2012-06-18
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Toward Understanding the Outer Membrane Uptake of Small Molecules by Pseudomonas aeruginosa.
J.Biol.Chem., 288, 2013
4GF4
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BU of 4gf4 by Molmil
Low pH structure of Pseudomonas putida OprB
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Porin B
Authors:van den Berg, B.
Deposit date:2012-08-02
Release date:2012-10-24
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for outer membrane sugar uptake in pseudomonads.
J.Biol.Chem., 287, 2012
1SFV
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BU of 1sfv by Molmil
PORCINE PANCREAS PHOSPHOLIPASE A2, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Van Den Berg, B, Tessari, M, Boelens, R, Dijkman, R, Kaptein, R, De Haas, G.H, Verheij, H.M.
Deposit date:1996-02-20
Release date:1996-07-11
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of porcine pancreatic phospholipase A2 complexed with micelles and a competitive inhibitor.
J.Biomol.NMR, 5, 1995
1SFW
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BU of 1sfw by Molmil
PORCINE PANCREAS PHOSPHOLIPASE A2, NMR, 18 STRUCTURES
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Van Den Berg, B, Tessari, M, Boelens, R, Dijkman, R, Kaptein, R, De Haas, G.H, Verheij, H.M.
Deposit date:1996-02-23
Release date:1996-07-11
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of porcine pancreatic phospholipase A2 complexed with micelles and a competitive inhibitor.
J.Biomol.NMR, 5, 1995
1T1L
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BU of 1t1l by Molmil
Crystal structure of the long-chain fatty acid transporter FadL
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein
Authors:van den Berg, B, Black, P.N, Clemons Jr, W.M, Rapoport, T.A.
Deposit date:2004-04-16
Release date:2004-06-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the long-chain fatty acid transporter FadL.
Science, 304, 2004
1T16
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BU of 1t16 by Molmil
Crystal structure of the bacterial fatty acid transporter FadL from Escherichia coli
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COPPER (II) ION, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:van den Berg, B, Black, P.N, Clemons Jr, W.M, Rapoport, T.A.
Deposit date:2004-04-15
Release date:2004-06-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the long-chain fatty acid transporter FadL.
Science, 304, 2004
1RH5
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BU of 1rh5 by Molmil
The structure of a protein conducting channel
Descriptor: Preprotein translocase secE subunit, Preprotein translocase secY subunit, SecBeta
Authors:van den Berg, B, Clemons Jr, W.M, Collinson, I, Modis, Y, Hartmann, E, Harrison, S.C, Rapoport, T.A.
Deposit date:2003-11-13
Release date:2004-01-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:X-ray structure of a protein-conducting channel
Nature, 427, 2004
5O79
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BU of 5o79 by Molmil
Klebsiella pneumoniae OmpK36
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MAGNESIUM ION, OmpK36
Authors:van den berg, B, Pathania, M.
Deposit date:2017-06-08
Release date:2018-06-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins.
Acs Infect Dis., 4, 2018
1RHZ
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BU of 1rhz by Molmil
The structure of a protein conducting channel
Descriptor: Preprotein translocase secE subunit, Preprotein translocase secY subunit, SecBeta
Authors:van den Berg, B, Clemons Jr, W.M, Collinson, I, Modis, Y, Hartmann, E, Harrison, S.C, Rapoport, T.A.
Deposit date:2003-11-15
Release date:2004-01-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:X-ray structure of a protein-conducting channel.
Nature, 427, 2004
5OYK
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BU of 5oyk by Molmil
Outer-membrane expressed OmpT of Vibrio cholerae
Descriptor: Gram-negative porin family protein
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-11
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
2F1T
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BU of 2f1t by Molmil
Outer membrane protein OmpW
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, GLYCEROL, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:van den Berg, B.
Deposit date:2005-11-15
Release date:2006-01-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:The outer membrane protein OmpW forms an eight-stranded beta-barrel with a hydrophobic channel.
J.Biol.Chem., 281, 2006
1PIS
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BU of 1pis by Molmil
SOLUTION STRUCTURE OF PORCINE PANCREATIC PHOSPHOLIPASE A2
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Van Den Berg, B.D, Tessari, M, De Haas, G.H, Verheij, H.M, Boelens, R, Kaptein, R.
Deposit date:1994-12-22
Release date:1995-06-03
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of porcine pancreatic phospholipase A2.
EMBO J., 14, 1995
1PIR
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BU of 1pir by Molmil
SOLUTION STRUCTURE OF PORCINE PANCREATIC PHOSPHOLIPASE A2
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Van Den Berg, B.D, Tessari, M, De Haas, G.H, Verheij, H.M, Boelens, R, Kaptein, R.
Deposit date:1994-12-22
Release date:1995-06-03
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of porcine pancreatic phospholipase A2.
EMBO J., 14, 1995
4D5D
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BU of 4d5d by Molmil
Crystal structure of CymA from Klebsiella oxytoca
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CYMA, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), ...
Authors:van den Berg, B, Bhamidimarri, S.P, Kleinekathoefer, U, Winterhalter, M.
Deposit date:2014-11-03
Release date:2015-06-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015

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