4O6Q
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![BU of 4o6q by Molmil](/molmil-images/mine/4o6q) | 0.95A resolution structure of the hemophore HasA from Pseudomonas aeruginosa (Y75A mutant) | 分子名称: | FORMIC ACID, HasAp, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Lovell, S, Kumar, R, Battaile, K.P, Matsumura, H, Yao, H, Rodriguez, J.C, Moenne-Loccoz, P, Rivera, M. | 登録日 | 2013-12-23 | 公開日 | 2014-03-26 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (0.95 Å) | 主引用文献 | Replacing the Axial Ligand Tyrosine 75 or Its Hydrogen Bond Partner Histidine 83 Minimally Affects Hemin Acquisition by the Hemophore HasAp from Pseudomonas aeruginosa. Biochemistry, 53, 2014
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3A0V
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![BU of 3a0v by Molmil](/molmil-images/mine/3a0v) | PAS domain of histidine kinase ThkA (TM1359) (SeMet, F486M/F489M) | 分子名称: | ETHANOL, Sensor protein | 著者 | Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y. | 登録日 | 2009-03-24 | 公開日 | 2009-10-20 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structure of PAS-linked histidine kinase and the response regulator complex Structure, 17, 2009
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3A0Y
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![BU of 3a0y by Molmil](/molmil-images/mine/3a0y) | Catalytic domain of histidine kinase ThkA (TM1359) (nucleotide free form 3: 1,2-propanediol, orthorombic) | 分子名称: | Sensor protein | 著者 | Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y. | 登録日 | 2009-03-25 | 公開日 | 2009-10-20 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.57 Å) | 主引用文献 | Structure of PAS-linked histidine kinase and the response regulator complex Structure, 17, 2009
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5XVC
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![BU of 5xvc by Molmil](/molmil-images/mine/5xvc) | [NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in a ferricyanide-oxidized condition | 分子名称: | DI(HYDROXYETHYL)ETHER, FE3-S4 CLUSTER, FE4-S4-O CLUSTER, ... | 著者 | Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y. | 登録日 | 2017-06-27 | 公開日 | 2018-06-27 | 最終更新日 | 2019-07-10 | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | 主引用文献 | Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2. Chem.Commun.(Camb.), 54, 2018
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3WVM
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![BU of 3wvm by Molmil](/molmil-images/mine/3wvm) | The 0.88 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with stearic acid | 分子名称: | Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ... | 著者 | Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Matsumura, H, Murakami, S, Inoue, T, Murata, M. | 登録日 | 2014-05-25 | 公開日 | 2015-01-28 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (0.88 Å) | 主引用文献 | Water-mediated recognition of simple alkyl chains by heart-type fatty-acid-binding protein. Angew.Chem.Int.Ed.Engl., 54, 2015
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3WYQ
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![BU of 3wyq by Molmil](/molmil-images/mine/3wyq) | Crystal structure of the low-immunogenic core streptavidin mutant LISA-314 (Y22S/Y83S/R84K/E101D/R103K/E116N) at 1.0 A resolution | 分子名称: | BIOTIN, GLYCEROL, SULFATE ION, ... | 著者 | Kawato, T, Mizohata, E, Meshizuka, T, Doi, H, Kawamura, T, Matsumura, H, Yumura, K, Tsumoto, K, Kodama, T, Inoue, T, Sugiyama, A. | 登録日 | 2014-09-05 | 公開日 | 2014-12-24 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1 Å) | 主引用文献 | Crystal structure of streptavidin mutant with low immunogenicity. J.Biosci.Bioeng., 119, 2015
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3WYP
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![BU of 3wyp by Molmil](/molmil-images/mine/3wyp) | Crystal structure of wild-type core streptavidin in complex with D-biotin/biotin-D-sulfoxide at 1.3 A resolution | 分子名称: | BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ... | 著者 | Kawato, T, Mizohata, E, Meshizuka, T, Doi, H, Kawamura, T, Matsumura, H, Yumura, K, Tsumoto, K, Kodama, T, Inoue, T, Sugiyama, A. | 登録日 | 2014-09-05 | 公開日 | 2014-12-24 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Crystal structure of streptavidin mutant with low immunogenicity. J.Biosci.Bioeng., 119, 2015
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3A0X
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![BU of 3a0x by Molmil](/molmil-images/mine/3a0x) | Catalytic domain of histidine kinase ThkA (TM1359) (nucleotide free form 1: ammomium phosphate, monoclinic) | 分子名称: | Sensor protein | 著者 | Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y. | 登録日 | 2009-03-25 | 公開日 | 2009-10-20 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.89 Å) | 主引用文献 | Structure of PAS-linked histidine kinase and the response regulator complex Structure, 17, 2009
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3A0T
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![BU of 3a0t by Molmil](/molmil-images/mine/3a0t) | Catalytic domain of histidine kinase ThkA (TM1359) in complex with ADP and Mg ion (trigonal) | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Sensor protein | 著者 | Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y. | 登録日 | 2009-03-24 | 公開日 | 2009-10-20 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.91 Å) | 主引用文献 | Structure of PAS-linked histidine kinase and the response regulator complex Structure, 17, 2009
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3A0Z
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![BU of 3a0z by Molmil](/molmil-images/mine/3a0z) | Catalytic domain of histidine kinase ThkA (TM1359) (nucleotide free form 4: isopropanol, orthorombic) | 分子名称: | Sensor protein | 著者 | Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y. | 登録日 | 2009-03-25 | 公開日 | 2009-10-20 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Structure of PAS-linked histidine kinase and the response regulator complex Structure, 17, 2009
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1IWO
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![BU of 1iwo by Molmil](/molmil-images/mine/1iwo) | |
3A0U
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![BU of 3a0u by Molmil](/molmil-images/mine/3a0u) | Crystal structure of response regulator protein TrrA (TM1360) from Thermotoga maritima in complex with Mg(2+)-BeF (wild type) | 分子名称: | BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Response regulator, ... | 著者 | Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y. | 登録日 | 2009-03-24 | 公開日 | 2009-10-20 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.66 Å) | 主引用文献 | Structure of PAS-linked histidine kinase and the response regulator complex Structure, 17, 2009
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3A10
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![BU of 3a10 by Molmil](/molmil-images/mine/3a10) | Crystal structure of response regulator protein TrrA (TM1360) from Thermotoga maritima in complex with Mg(2+)-BeF (SeMet, L89M) | 分子名称: | BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Response regulator, ... | 著者 | Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y. | 登録日 | 2009-03-25 | 公開日 | 2009-10-20 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (1.63 Å) | 主引用文献 | Structure of PAS-linked histidine kinase and the response regulator complex Structure, 17, 2009
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1IWA
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![BU of 1iwa by Molmil](/molmil-images/mine/1iwa) | RUBISCO FROM GALDIERIA PARTITA | 分子名称: | SULFATE ION, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit | 著者 | Okano, Y, Mizohata, E, Xie, Y, Matsumura, H, Sugawara, H, Inoue, T, Yokota, A, Kai, Y. | 登録日 | 2002-04-30 | 公開日 | 2003-04-30 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | X-Ray Structure of Galdieria Rubisco Complexed with one sulfate ion per active site FEBS LETT., 527, 2002
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1IR1
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![BU of 1ir1 by Molmil](/molmil-images/mine/1ir1) | Crystal Structure of Spinach Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase (Rubisco) Complexed with CO2, Mg2+ and 2-Carboxyarabinitol-1,5-Bisphosphate | 分子名称: | 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Large subunit of Rubisco, MAGNESIUM ION, ... | 著者 | Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y. | 登録日 | 2001-08-31 | 公開日 | 2002-03-13 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate. J.Mol.Biol., 316, 2002
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1HR6
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![BU of 1hr6 by Molmil](/molmil-images/mine/1hr6) | Yeast Mitochondrial Processing Peptidase | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT, MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT, ... | 著者 | Taylor, A.B, Smith, B.S, Kitada, S, Kojima, K, Miyaura, H, Otwinowski, Z, Ito, A, Deisenhofer, J. | 登録日 | 2000-12-21 | 公開日 | 2001-07-11 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structures of mitochondrial processing peptidase reveal the mode for specific cleavage of import signal sequences. Structure, 9, 2001
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1X1P
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![BU of 1x1p by Molmil](/molmil-images/mine/1x1p) | Crystal structure of Tk-RNase HII(1-197)-A(28-42) | 分子名称: | Ribonuclease HII | 著者 | Takano, K, Endo, S, Mukaiyama, A, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | 登録日 | 2005-04-11 | 公開日 | 2006-01-17 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Structure of amyloid beta fragments in aqueous environments Febs J., 273, 2006
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1WSE
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![BU of 1wse by Molmil](/molmil-images/mine/1wse) | Co-crystal structure of E.coli RNase HI active site mutant (E48A*) with Mn2+ | 分子名称: | MANGANESE (II) ION, Ribonuclease HI | 著者 | Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S. | 登録日 | 2004-11-05 | 公開日 | 2005-02-08 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Identification of Single Mn(2+) Binding Sites Required for Activation of the Mutant Proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray Crystallography J.Mol.Biol., 345, 2005
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1X0M
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![BU of 1x0m by Molmil](/molmil-images/mine/1x0m) | a Human Kynurenine Aminotransferase II Homologue from Pyrococcus horikoshii OT3 | 分子名称: | Aminotransferase II Homologue | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2005-03-24 | 公開日 | 2005-04-12 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of a human kynurenine aminotransferase II homologue from Pyrococcus horikoshii OT3 at 2.20 A resolution Proteins, 61, 2005
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1WSI
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1WSH
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![BU of 1wsh by Molmil](/molmil-images/mine/1wsh) | |
1WSJ
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3VHK
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![BU of 3vhk by Molmil](/molmil-images/mine/3vhk) | Crystal structure of the VEGFR2 kinase domain in complex with a back pocket binder | 分子名称: | 1,2-ETHANEDIOL, Vascular endothelial growth factor receptor 2, {3-[(5-methyl-2-phenyl-1,3-oxazol-4-yl)methoxy]phenyl}methanol | 著者 | Iwata, H, Oki, H, Okada, K, Takagi, T, Tawada, M, Miyazaki, Y, Imamura, S, Hori, A, Hixon, M.S, Kimura, H, Miki, H. | 登録日 | 2011-08-25 | 公開日 | 2012-09-05 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.49 Å) | 主引用文献 | A Back-to-Front Fragment-Based Drug Design Search Strategy Targeting the DFG-Out Pocket of Protein Tyrosine Kinases. ACS MED.CHEM.LETT., 3, 2012
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3VID
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![BU of 3vid by Molmil](/molmil-images/mine/3vid) | Crystal structure of human VEGFR2 kinase domain with Compound A. | 分子名称: | 4,5,6,11-tetrahydro-1H-pyrazolo[4',3':6,7]cyclohepta[1,2-b]indole, Vascular endothelial growth factor receptor 2 | 著者 | Iwata, H, Oki, H, Okada, K, Takagi, T, Tawada, M, Miyazaki, Y, Imamura, S, Hori, A, Hixon, M.S, Kimura, H, Miki, H. | 登録日 | 2011-09-29 | 公開日 | 2012-08-15 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | A Back-to-Front Fragment-Based Drug Design Search Strategy Targeting the DFG-Out Pocket of Protein Tyrosine Kinases. ACS MED.CHEM.LETT., 3, 2012
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3JSV
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![BU of 3jsv by Molmil](/molmil-images/mine/3jsv) | Crystal structure of mouse NEMO CoZi in complex with Lys63-linked di-ubiquitin | 分子名称: | NF-kappa-B essential modulator, Ubiquitin | 著者 | Yoshikawa, A, Sato, Y, Mimura, H, Yamashita, M, Yamagata, A, Fukai, S. | 登録日 | 2009-09-11 | 公開日 | 2009-10-27 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of the NEMO ubiquitin-binding domain in complex with Lys 63-linked di-ubiquitin Febs Lett., 583, 2009
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