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PDB: 136 件

1C3A
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CRYSTAL STRUCTURE OF FLAVOCETIN-A FROM THE HABU SNAKE VENOM, A NOVEL CYCLIC TETRAMER OF C-TYPE LECTIN-LIKE HETERODIMERS
分子名称: FLAVOCETIN-A: ALPHA SUBUNIT, FLAVOCETIN-A: BETA SUBUNIT
著者Fukuda, K, Mizuno, H, Atoda, H, Morita, T.
登録日1999-07-27
公開日2000-03-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of flavocetin-A, a platelet glycoprotein Ib-binding protein, reveals a novel cyclic tetramer of C-type lectin-like heterodimers.
Biochemistry, 39, 2000
6JPP
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Solution structure of ELMO1 RBD
分子名称: Engulfment and cell motility protein 1
著者Tsuda, K, Kukimoto-Niino, M, Shirouzu, M.
登録日2019-03-27
公開日2020-04-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Targeting Ras-binding domain of ELMO1 by computational nanobody design.
Commun Biol, 6, 2023
1IJB
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The von Willebrand Factor mutant (I546V) A1 domain
分子名称: von Willebrand factor
著者Fukuda, K, Doggett, T.A, Bankston, L.A, Cruz, M.A, Diacovo, T.G, Liddington, R.C.
登録日2001-04-25
公開日2002-07-10
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of von Willebrand factor activation by the snake toxin botrocetin.
Structure, 10, 2002
1IJK
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The von Willebrand Factor mutant (I546V) A1 domain-botrocetin Complex
分子名称: Botrocetin, von Willebrand factor
著者Fukuda, K, Doggett, T.A, Bankston, L.A, Cruz, M.A, Diacovo, T.G, Liddington, R.C.
登録日2001-04-26
公開日2002-07-10
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of von Willebrand factor activation by the snake toxin botrocetin.
Structure, 10, 2002
8P4U
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Alpha-1-antitrypsin - Sydney variant (G192C)
分子名称: Alpha-1-antitrypsin
著者Kamuda, K, Lomas, D.A, Irving, J.A.
登録日2023-05-23
公開日2024-04-03
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A novel pathological mutant reveals the role of torsional flexibility in the serpin breach in adoption of an aggregation-prone intermediate.
Febs J., 291, 2024
8P4J
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Alpha-1-antitrypsin - Sydney variant (G192C)
分子名称: Alpha-1-antitrypsin
著者Kamuda, K, Lomas, D.A, Irving, J.A.
登録日2023-05-22
公開日2024-04-03
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献A novel pathological mutant reveals the role of torsional flexibility in the serpin breach in adoption of an aggregation-prone intermediate.
Febs J., 291, 2024
3KMW
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Crystal structure of the ILK/alpha-parvin core complex (MgATP)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Alpha-parvin, Integrin-linked kinase, ...
著者Fukuda, K, Qin, J.
登録日2009-11-11
公開日2009-12-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The pseudoactive site of ILK is essential for its binding to alpha-Parvin and localization to focal adhesions.
Mol.Cell, 36, 2009
3KMU
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Crystal structure of the ILK/alpha-parvin core complex (apo)
分子名称: Alpha-parvin, Integrin-linked kinase
著者Fukuda, K, Qin, J.
登録日2009-11-11
公開日2009-12-29
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The pseudoactive site of ILK is essential for its binding to alpha-Parvin and localization to focal adhesions.
Mol.Cell, 36, 2009
2GLT
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STRUCTURE OF ESCHERICHIA COLI GLUTATHIONE SYNTHETASE AT PH 6.0.
分子名称: GLUTATHIONE BIOSYNTHETIC LIGASE
著者Matsuda, K, Yamaguchi, H, Kato, H, Nishioka, T, Katsube, Y, Oda, J.
登録日1995-05-16
公開日1995-07-31
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins.
Protein Eng., 9, 1996
7Y4A
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Crystal structure of human ELMO1 RBD-RhoG complex
分子名称: Engulfment and cell motility protein 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Tsuda, K, Kukimoto-Niino, M, Shirouzu, M.
登録日2022-06-14
公開日2023-03-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Targeting Ras-binding domain of ELMO1 by computational nanobody design.
Commun Biol, 6, 2023
7LT9
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Crystal structure of Ras suppressor-1 in complex with PINCH-1 LIM4-5 domains
分子名称: LIM and senescent cell antigen-like-containing domain protein 1, Ras suppressor protein 1, ZINC ION
著者Fukuda, K, Qin, J.
登録日2021-02-19
公開日2021-04-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.050112 Å)
主引用文献Molecular basis for Ras suppressor-1 binding to PINCH-1 in focal adhesion assembly.
J.Biol.Chem., 296, 2021
7LT8
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Crystal structure of Ras suppressor-1
分子名称: Ras suppressor protein 1
著者Fukuda, K, Qin, J.
登録日2021-02-19
公開日2021-04-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.76000249 Å)
主引用文献Molecular basis for Ras suppressor-1 binding to PINCH-1 in focal adhesion assembly.
J.Biol.Chem., 296, 2021
5ZQT
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Crystal structure of Oryza sativa hexokinase 6
分子名称: Hexokinase-6, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Matsudaira, K, Mochizuki, S, Yoshida, H, Kamitori, S, Akimitsu, K.
登録日2018-04-20
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Crystal structure of Oryza sativa hexokinase 6
To Be Published
6MIB
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Crystal structure of the ILK ATP-binding deficient mutant (L207W)/alpha-parvin core complex
分子名称: Alpha-parvin, Integrin-linked protein kinase
著者Fukuda, K, Qin, J.
登録日2018-09-19
公開日2018-11-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Non-catalytic signaling by pseudokinase ILK for regulating cell adhesion.
Nat Commun, 9, 2018
2MSU
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NMR structure of Kindlin-2 F2 339-358
分子名称: Fermitin family homolog 2
著者Fukuda, K, Bledzka, K, Yang, J, Perera, H.D.
登録日2014-08-05
公開日2014-08-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Molecular Basis of Kindlin-2 Binding to Integrin-linked Kinase Pseudokinase for Regulating Cell Adhesion.
J.Biol.Chem., 289, 2014
2RRA
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Solution structure of RNA binding domain in human Tra2 beta protein in complex with RNA (GAAGAA)
分子名称: 5'-R(*GP*AP*AP*GP*AP*A)-3', cDNA FLJ40872 fis, clone TUTER2000283, ...
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Sugano, S, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-06-17
公開日2011-04-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for the dual RNA-recognition modes of human Tra2-beta RRM.
Nucleic Acids Res., 39, 2011
2RQ4
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Refinement of RNA binding domain 3 in CUG triplet repeat RNA-binding protein 1
分子名称: CUG-BP- and ETR-3-like factor 1
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Terada, T, Kobayashi, N, Shirouzu, M, Kigawa, T, Guntert, P, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-01-19
公開日2009-08-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3
Nucleic Acids Res., 2009
2RQC
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Solution Structure of RNA-binding domain 3 of CUGBP1 in complex with RNA (UG)3
分子名称: 5'-R(*UP*GP*UP*GP*UP*G)-3', CUG-BP- and ETR-3-like factor 1
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-04-09
公開日2009-08-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3
Nucleic Acids Res., 37, 2009
2RRB
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Refinement of RNA binding domain in human Tra2 beta protein
分子名称: cDNA FLJ40872 fis, clone TUTER2000283, highly similar to Homo sapiens transformer-2-beta (SFRS10) gene
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Sugano, S, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-06-17
公開日2011-04-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for the dual RNA-recognition modes of human Tra2-beta RRM.
Nucleic Acids Res., 39, 2011
2RUG
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Refined solution structure of the first RNA recognition motif domain in CPEB3
分子名称: Cytoplasmic polyadenylation element-binding protein 3
著者Tsuda, K, Kuwasako, K, Nagata, T, Takahashi, M, Kigawa, T, Kobayashi, N, Guntert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2014-04-15
公開日2014-09-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Novel RNA recognition motif domain in the cytoplasmic polyadenylation element binding protein 3.
Proteins, 82, 2014
7DRU
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Crystal Structure of the Dog Lipocalin Allergen Can f 1
分子名称: Major allergen Can f 1
著者Suda, K, Muroya, H, Nishimura, S, Inui, T.
登録日2020-12-29
公開日2021-11-10
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-based prediction of the IgE epitopes of the major dog allergen Can f 1.
Febs J., 289, 2022
1PZL
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Crystal structure of HNF4a LBD in complex with the ligand and the coactivator SRC-1 peptide
分子名称: Hepatocyte nuclear factor 4-alpha, MYRISTIC ACID, steroid receptor coactivator-1
著者Duda, K, Chi, Y.-I, Dhe-paganon, S, Shoelson, S.
登録日2003-07-11
公開日2004-06-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for HNF-4alpha Activation by Ligand and Coactivator Binding
J.Biol.Chem., 279, 2004
1WG1
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Solution structure of RNA binding domain in BAB13405(homolog EXC-7)
分子名称: KIAA1579 protein
著者Tsuda, K, Muto, Y, Nagata, T, Suzuki, S, Someya, T, Kigawa, T, Terada, T, Shirouzu, M, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-27
公開日2004-11-27
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Solution structure of RNA binding domain in BAB13405(homolog EXC-7)
To be Published
1GSH
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STRUCTURE OF ESCHERICHIA COLI GLUTATHIONE SYNTHETASE AT PH 7.5
分子名称: GLUTATHIONE BIOSYNTHETIC LIGASE
著者Matsuda, K, Kato, H, Yamaguchi, H, Nishioka, T, Katsube, Y, Oda, J.
登録日1995-05-16
公開日1996-07-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins.
Protein Eng., 9, 1996
3REP
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BU of 3rep by Molmil
Crystal structure of the ILK/alpha-parvin core complex (MnATP)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Alpha-parvin, Integrin-linked kinase, ...
著者Fukuda, K, Qin, J.
登録日2011-04-04
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the ILK/alpha-parvin core complex (MnATP)
To be Published

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