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PDB: 120 results

7ZOA
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cryo-EM structure of CGT ABC transporter in presence of CBG substrate
Descriptor: Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, Cyclooctadecakis-(1-2)-(beta-D-glucopyranose)
Authors:Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
Deposit date:2022-04-24
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
1NX2
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BU of 1nx2 by Molmil
Calpain Domain VI
Descriptor: CALCIUM ION, Calcium-dependent protease, small subunit
Authors:Todd, B, Moore, D, Deivanayagam, C.C.S, Lin, G.-D, Chattopadhyay, D, Maki, M, Wang, K.K.W, Narayana, S.V.L.
Deposit date:2003-02-07
Release date:2003-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A structural model for the inhibition of calpain by calpastatin: crystal structures of the native domain VI of calpain and its complexes with calpastatin peptide and a small molecule inhibitor.
J.Mol.Biol., 328, 2003
5V8Y
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BU of 5v8y by Molmil
Mutant Structures of Streptococcus Agalactiae GBS Glyceraldehyde-3-Phosphate Dehydrogenase (GAPDH)
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, MAGNESIUM ION
Authors:Schormann, N, Ulett, G.C, Chattopadhyay, D.
Deposit date:2017-03-22
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mutant Structures of Streptococcus Agalactiae GBS Glyceraldehyde-3-Phosphate Dehydrogenase (GAPDH)
To Be Published
5JYF
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BU of 5jyf by Molmil
Structures of Streptococcus agalactiae GBS GAPDH in different enzymatic states
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2016-05-13
Release date:2016-12-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal Structures of Group B Streptococcus Glyceraldehyde-3-Phosphate Dehydrogenase: Apo-Form, Binary and Ternary Complexes.
PLoS ONE, 11, 2016
2V54
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BU of 2v54 by Molmil
Crystal structure of vaccinia virus thymidylate kinase bound to TDP
Descriptor: MAGNESIUM ION, PYROPHOSPHATE 2-, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Caillat, C, Topalis, D, Agrofoglio, L.A, Pochet, S, Balzarini, J, Deville-Bonne, D, Meyer, P.
Deposit date:2008-10-01
Release date:2008-10-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Poxvirus Thymidylate Kinase: An Unexpected Dimerization Has Implications for Antiviral Therapy
Proc.Natl.Acad.Sci.USA, 105, 2008
1DOJ
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BU of 1doj by Molmil
Crystal structure of human alpha-thrombin*RWJ-51438 complex at 1.7 A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-THROMBIN, HIRUGEN, ...
Authors:Recacha, R, Costanzo, M.J, Maryanoff, B.E, Carson, M, DeLucas, L, Chattopadhyay, D.
Deposit date:1999-12-21
Release date:2000-11-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of human alpha-thrombin complexed with RWJ-51438 at 1.7 A: unusual perturbation of the 60A-60I insertion loop.
Acta Crystallogr.,Sect.D, 56, 2000
1NX3
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BU of 1nx3 by Molmil
Calpain Domain VI in Complex with the Inhibitor PD150606
Descriptor: 3-(4-IODO-PHENYL)-2-MERCAPTO-PROPIONIC ACID, CALCIUM ION, Calcium-dependent protease, ...
Authors:Todd, B, Moore, D, Deivanayagam, C.C.S, Lin, G.-D, Chattopadhyay, D, Maki, M, Wang, K.K.W, Narayana, S.V.L.
Deposit date:2003-02-07
Release date:2003-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A structural model for the inhibition of calpain by calpastatin: crystal structures of the native domain VI of calpain and its complexes with calpastatin peptide and a small molecule inhibitor.
J.Mol.Biol., 328, 2003
1ALV
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BU of 1alv by Molmil
CALCIUM BOUND DOMAIN VI OF PORCINE CALPAIN
Descriptor: CALCIUM ION, CALPAIN
Authors:Narayana, S.V.L, Lin, G, Chattopadhyay, D, Maki, M.
Deposit date:1997-06-03
Release date:1998-06-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of calcium bound domain VI of calpain at 1.9 A resolution and its role in enzyme assembly, regulation, and inhibitor binding.
Nat.Struct.Biol., 4, 1997
1VSU
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BU of 1vsu by Molmil
Crystal Structure of Apo-glyceraldehyde 3-phosphate dehydrogenase from Cryptosporidium parvum
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Cook, W.J, Senkovich, O, Chattopadhyay, D.
Deposit date:2008-03-10
Release date:2009-03-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An unexpected phosphate binding site in Glyceraldehyde 3-Phosphate Dehydrogenase: Crystal structures of apo, holo and ternary complex of Cryptosporidium parvum enzyme
BMC STRUCT.BIOL., 9, 2009
1QCP
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BU of 1qcp by Molmil
CRYSTAL STRUCTURE OF THE RWJ-51084 BOVINE PANCREATIC BETA-TRYPSIN AT 1.8 A
Descriptor: CALCIUM ION, CYCLOPENTANECARBOXYLIC ACID [1-(BENZOTHIAZOLE-2-CARBONYL)-4-GUANIDINO-BUTYL]-AMIDE, PROTEIN (BETA-TRYPSIN PROTEIN)
Authors:Recacha, R, Carson, M, Costanzo, M.J, Maryanoff, B, Chattopadhyay, D.
Deposit date:1999-05-10
Release date:1999-05-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the RWJ-51084-bovine pancreatic beta-trypsin complex at 1.8 A.
Acta Crystallogr.,Sect.D, 55, 1999
6X2E
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BU of 6x2e by Molmil
Crystal Structure of Chlamydia trachomatis mixed (apo/holo) Glyceraldehyde 3-phosphate dehydrogenase
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2020-05-20
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Chlamydia trachomatis glyceraldehyde 3-phosphate dehydrogenase: Enzyme kinetics, high-resolution crystal structure, and plasminogen binding.
Protein Sci., 29, 2020
5UTM
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BU of 5utm by Molmil
Mutant Structures of Streptococcus Agalactiae GBS Glyceraldehyde-3-Phosphate Dehydrogenase (GAPDH)
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Schormann, N, Ulett, G.C, Chattopadhyay, D.
Deposit date:2017-02-15
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Mutant Structures of Streptococcus agalactiae GAPDH
To Be Published
4QCA
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BU of 4qca by Molmil
Crystal structure of Vaccinia virus uracil-DNA glycosylase mutant R167AD4
Descriptor: CHLORIDE ION, GLYCEROL, POTASSIUM ION, ...
Authors:Sartmatova, D, Nash, T, Schormann, N, Nuth, M, Ricciardi, R, Banerjee, S, Chattopadhyay, D.
Deposit date:2014-05-09
Release date:2015-05-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallization and preliminary X-ray diffraction analysis of three recombinant mutants of Vaccinia virus uracil DNA glycosylase.
Acta Crystallogr.,Sect.F, 69, 2013
6WYC
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BU of 6wyc by Molmil
Crystal Structure of Chlamydia trachomatis Glyceraldehyde 3-phosphate dehydrogenase
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2020-05-12
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Chlamydia trachomatis glyceraldehyde 3-phosphate dehydrogenase: Enzyme kinetics, high-resolution crystal structure, and plasminogen binding.
Protein Sci., 29, 2020
5UTL
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BU of 5utl by Molmil
Mutant Structures of Streptococcus Agalactiae GBS Glyceraldehyde-3-Phosphate Dehydrogenase (GAPDH)
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Schormann, N, Ulett, G.C, Chattopadhyay, D.
Deposit date:2017-02-15
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Mutant Structures of Streptococcus agalactiae GAPDH
To Be Published
5V8X
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BU of 5v8x by Molmil
Mutant Structures of Streptococcus Agalactiae GBS Glyceraldehyde-3-Phosphate Dehydrogenase (GAPDH)
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Schormann, N, Ulett, G.C, Chattopadhyay, D.
Deposit date:2017-03-22
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Mutant Structures of Streptococcus Agalactiae GBS Glyceraldehyde-3-Phosphate Dehydrogenase (GAPDH)
To Be Published
1MXH
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BU of 1mxh by Molmil
Crystal Structure of Substrate Complex of Putative Pteridine Reductase 2 (PTR2) from Trypanosoma cruzi
Descriptor: DIHYDROFOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PTERIDINE REDUCTASE 2
Authors:Schormann, N, Pal, B, Senkovich, O, Carson, M, Howard, A, Smith, C, Delucas, L, Chattopadhyay, D.
Deposit date:2002-10-02
Release date:2003-10-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Trypanosoma cruzi pteridine reductase 2 in complex with a substrate and an inhibitor.
J.Struct.Biol., 152, 2005
4DRS
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BU of 4drs by Molmil
Crystal structure of Cryptosporidium parvum pyruvate kinase
Descriptor: ACETATE ION, GLYCEROL, Pyruvate kinase, ...
Authors:Cook, W.J, Chattopadhyay, D.
Deposit date:2012-02-17
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Cryptosporidium parvum pyruvate kinase.
Plos One, 7, 2012
4DOG
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BU of 4dog by Molmil
Structures of Vaccinia Virus Uracil-DNA Glycosylase in New Crystal Forms
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Uracil-DNA glycosylase
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2012-02-09
Release date:2013-02-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Analysis of the Dimer Interface in Crystal Structures of Vaccinia Virus Uracil DNA Glycosylase
To be Published
1MXF
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BU of 1mxf by Molmil
Crystal Structure of Inhibitor Complex of Putative Pteridine Reductase 2 (PTR2) from Trypanosoma cruzi
Descriptor: METHOTREXATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PTERIDINE REDUCTASE 2
Authors:Schormann, N, Pal, B, Senkovich, O, Carson, M, Howard, A, Smith, C, Delucas, L, Chattopadhyay, D.
Deposit date:2002-10-02
Release date:2003-10-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Trypanosoma cruzi pteridine reductase 2 in complex with a substrate and an inhibitor.
J.Struct.Biol., 152, 2005
4QX6
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BU of 4qx6 by Molmil
CRYSTAL STRUCTURE OF GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM STREPTOCOCCUS AGALACTIAE NEM316 at 2.46 ANGSTROM RESOLUTION
Descriptor: 1,2-ETHANEDIOL, Glyceraldehyde 3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Ayres, C.A, Schormann, N, Banerjee, S, Chattopadhyay, D.
Deposit date:2014-07-18
Release date:2014-10-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure of Streptococcus agalactiae glyceraldehyde-3-phosphate dehydrogenase holoenzyme reveals a novel surface.
Acta Crystallogr F Struct Biol Commun, 70, 2014
5MGM
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BU of 5mgm by Molmil
Crystal Structure of BAZ2A bromodomain in complex with acetophenone derivative 4
Descriptor: 1-(3-pyrimidin-2-yloxyphenyl)ethanone, Bromodomain adjacent to zinc finger domain protein 2A
Authors:Lolli, G, Spiliotopoulos, D, Caflisch, A.
Deposit date:2016-11-21
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of BAZ2A bromodomain ligands.
Eur J Med Chem, 139, 2017
4QCB
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BU of 4qcb by Molmil
Protein-DNA complex of Vaccinia virus D4 with double-stranded non-specific DNA
Descriptor: 5'-D(*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*C)-3', GLYCEROL, Uracil-DNA glycosylase
Authors:Schormann, N, Banerjee, S, Ricciardi, R, Chattopadhyay, D.
Deposit date:2014-05-09
Release date:2015-06-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Binding of undamaged double stranded DNA to vaccinia virus uracil-DNA Glycosylase.
BMC Struct. Biol., 15, 2015
4QC9
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Crystal structure of Vaccinia virus uracil-DNA glycosylase mutant 3GD4
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Uracil-DNA glycosylase
Authors:Sartmatova, D, Nash, T, Schormann, N, Nuth, M, Ricciardi, R, Banerjee, S, Chattopadhyay, D.
Deposit date:2014-05-09
Release date:2015-05-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.259 Å)
Cite:Crystal structure of Vaccinia virus uracil-DNA glycosylase mutant 3GD4
To be Published
4LZB
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BU of 4lzb by Molmil
Uracil binding pocket in Vaccinia virus uracil DNA glycosylase
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2013-07-31
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structure of the uracil complex of Vaccinia virus uracil DNA glycosylase.
Acta Crystallogr.,Sect.F, 69, 2013

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