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PDB: 54 results

8BA1
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CTD12-CTD12 heterodimer from CPSF73 and CPSF100
Descriptor: Cleavage and polyadenylation specificity factor subunit 2, Cleavage and polyadenylation specificity factor subunit 3
Authors:Thore, S, Mackereth, C.
Deposit date:2022-10-10
Release date:2023-05-03
Last modified:2023-12-06
Method:SOLUTION NMR
Cite:Molecular details of the CPSF73-CPSF100 C-terminal heterodimer and interaction with Symplekin.
Open Biology, 13, 2023
8B7T
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CPSF73 CTD3
Descriptor: CPSF73
Authors:Thore, S, Mackereth, C.
Deposit date:2022-10-03
Release date:2023-05-03
Last modified:2023-12-06
Method:SOLUTION NMR
Cite:Molecular details of the CPSF73-CPSF100 C-terminal heterodimer and interaction with Symplekin.
Open Biology, 13, 2023
1UOC
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BU of 1uoc by Molmil
X-ray structure of the RNase domain of the yeast Pop2 protein
Descriptor: CALCIUM ION, POP2, XENON
Authors:Thore, S, Mauxion, F, Seraphin, B, Suck, D.
Deposit date:2003-09-16
Release date:2003-11-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-Ray Structure and Activity of the Yeast Pop2 Protein: A Nuclease Subunit of the Mrna Deadenylase Complex
Embo Rep., 4, 2003
2CKY
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Structure of the Arabidopsis thaliana thiamine pyrophosphate riboswitch with its regulatory ligand
Descriptor: MAGNESIUM ION, NUCLEIC ACID, OSMIUM ION, ...
Authors:Thore, S, Leibundgut, M, Ban, N.
Deposit date:2006-04-24
Release date:2006-05-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Eukaryotic Thiamine Pyrophosphate Riboswitch with its Regulatory Ligand.
Science, 312, 2006
5NLG
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RRP5 C-terminal domain
Descriptor: rRNA biogenesis protein RRP5
Authors:Thore, S, Fribourg, S.
Deposit date:2017-04-04
Release date:2018-08-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and interaction analysis of the Rrp5 C-terminal region.
FEBS Open Bio, 8, 2018
1M8V
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Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer
Descriptor: 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3', CALCIUM ION, PUTATIVE SNRNP SM-LIKE PROTEIN, ...
Authors:Thore, S, Mayer, C, Sauter, C, Weeks, S, Suck, D.
Deposit date:2002-07-26
Release date:2003-02-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Pyrococcus abyssii Sm core and its Complex with RNA: Common Features of RNA-binding in Archaea and Eukarya
J.Biol.Chem., 278, 2003
5HZD
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RNA Editing TUTase 1 from Trypanosoma brucei
Descriptor: 3' terminal uridylyl transferase, CHLORIDE ION, SULFATE ION, ...
Authors:Thore, S, Rajappa, L.T.
Deposit date:2016-02-02
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:RNA Editing TUTase 1: structural foundation of substrate recognition, complex interactions and drug targeting.
Nucleic Acids Res., 44, 2016
5IDO
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RNA Editing TUTase 1 from Trypanosoma brucei in complex with UTP
Descriptor: 3' terminal uridylyl transferase, MAGNESIUM ION, URIDINE 5'-TRIPHOSPHATE, ...
Authors:Thore, S, Rajappa, L.T.
Deposit date:2016-02-24
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:RNA Editing TUTase 1: structural foundation of substrate recognition, complex interactions and drug targeting.
Nucleic Acids Res., 44, 2016
5I49
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RNA Editing TUTase 1 from Trypanosoma brucei in complex with UTP analog UMPNPP
Descriptor: 3' terminal uridylyl transferase, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, MAGNESIUM ION, ...
Authors:Thore, S, Rajappa, L.T.
Deposit date:2016-02-11
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:RNA Editing TUTase 1: structural foundation of substrate recognition, complex interactions and drug targeting.
Nucleic Acids Res., 44, 2016
2JJ6
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Crystal structure of the putative carbohydrate recognition domain of the human galectin-related protein
Descriptor: GALECTIN-RELATED PROTEIN
Authors:Thore, S, Walti, M.A, Kunzler, M, Aebi, M.
Deposit date:2008-03-18
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Putative Carbohydrate Recognition Domain of Human Galectin-Related Protein
Proteins: Struct., Funct., Bioinf., 72, 2008
3D2V
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Structure of the eukaryotic TPP-specific riboswitch bound to the antibacterial compound pyrithiamine pyrophosphate
Descriptor: 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-2-METHYLPYRIDINIUM, MAGNESIUM ION, TPP-specific riboswitch
Authors:Thore, S, Frick, C, Ban, N.
Deposit date:2008-05-09
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
J.Am.Chem.Soc., 130, 2008
3D2X
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Structure of the thiamine pyrophosphate-specific riboswitch bound to oxythiamine pyrophosphate
Descriptor: 3-[(4-hydroxy-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, MAGNESIUM ION, TPP-specific riboswitch
Authors:Thore, S, Frick, C, Ban, N.
Deposit date:2008-05-09
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
J.Am.Chem.Soc., 130, 2008
3D2G
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Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
Descriptor: MAGNESIUM ION, THIAMINE DIPHOSPHATE, TPP-specific riboswitch
Authors:Thore, S.
Deposit date:2008-05-08
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
J.Am.Chem.Soc., 130, 2008
1L6W
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BU of 1l6w by Molmil
Fructose-6-phosphate aldolase
Descriptor: Fructose-6-phosphate aldolase 1, GLYCEROL
Authors:Thorell, S, Schuermann, M, Sprenger, G.A, Schneider, G.
Deposit date:2002-03-14
Release date:2002-06-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of decameric fructose-6-phosphate aldolase from Escherichia coli reveals inter-subunit helix swapping as a structural basis for assembly differences in the transaldolase family.
J.Mol.Biol., 319, 2002
1I2Q
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI TRANSALDOLASE B MUTANT T156A
Descriptor: TRANSALDOLASE B
Authors:Thorell, S, Jia, J, Schneider, G.
Deposit date:2001-02-12
Release date:2001-05-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Identification of catalytically important residues in the active site of Escherichia coli transaldolase.
Eur.J.Biochem., 268, 2001
1I2O
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI TRANSALDOLASE B MUTANT E96A
Descriptor: TRANSALDOLASE B
Authors:Thorell, S, Jia, J, Schneider, G.
Deposit date:2001-02-12
Release date:2001-05-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Identification of catalytically important residues in the active site of Escherichia coli transaldolase.
Eur.J.Biochem., 268, 2001
1I2N
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI TRANSALDOLASE B MUTANT N35A
Descriptor: TRANSALDOLASE B
Authors:Thorell, S, Jia, J, Schneider, G.
Deposit date:2001-02-12
Release date:2001-05-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Identification of catalytically important residues in the active site of Escherichia coli transaldolase.
Eur.J.Biochem., 268, 2001
1I2R
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI TRANSALDOLASE B MUTANT S176A
Descriptor: TRANSALDOLASE B
Authors:Thorell, S, Jia, J, Schneider, G.
Deposit date:2001-02-12
Release date:2001-05-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of catalytically important residues in the active site of Escherichia coli transaldolase.
Eur.J.Biochem., 268, 2001
1I2P
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BU of 1i2p by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI TRANSALDOLASE B MUTANT D17A
Descriptor: TRANSALDOLASE B
Authors:Thorell, S, Jia, J, Schneider, G.
Deposit date:2001-02-12
Release date:2001-05-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Identification of catalytically important residues in the active site of Escherichia coli transaldolase.
Eur.J.Biochem., 268, 2001
6GIQ
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BU of 6giq by Molmil
Saccharomyces cerevisiae respiratory supercomplex III2IV
Descriptor: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate, (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate, ...
Authors:Rathore, S, Berndtsson, J, Conrad, J, Ott, M.
Deposit date:2018-05-15
Release date:2019-01-02
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Cryo-EM structure of the yeast respiratory supercomplex.
Nat. Struct. Mol. Biol., 26, 2019
4WN4
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BU of 4wn4 by Molmil
Crystal structure of designed cPPR-polyA protein
Descriptor: Pentatricopeptide repeat protein
Authors:Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O.
Deposit date:2014-10-10
Release date:2014-12-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
4WSL
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BU of 4wsl by Molmil
Crystal structure of designed cPPR-polyC protein
Descriptor: Pentatricopeptide repeat protein
Authors:Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O.
Deposit date:2014-10-28
Release date:2014-12-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:An artificial PPR scaffold for programmable RNA recognition.
Nat Commun, 5, 2014
3VEM
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BU of 3vem by Molmil
Structural basis of transcriptional gene silencing mediated by Arabidopsis MOM1
Descriptor: Helicase protein MOM1
Authors:Nishikura, T, Petty, T.J, Halazonetis, T, Paszkowski, J, Thore, S.
Deposit date:2012-01-09
Release date:2012-03-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis of Transcriptional Gene Silencing Mediated by Arabidopsis MOM1.
PLOS GENET., 8, 2012
4R7N
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BU of 4r7n by Molmil
Fab C2E3
Descriptor: Fab C2E3 Heavy chain, Fab C2E3 Light chain
Authors:Loyau, J, Didelot, G, Malinge, P, Ravn, U, Magistrelli, G, Depoisier, J.F, Kosco-Vilbois, M, Fischer, N, Thore, S, Rousseau, F.
Deposit date:2014-08-28
Release date:2015-07-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Robust Antibody-Antigen Complexes Prediction Generated by Combining Sequence Analyses, Mutagenesis, In Vitro Evolution, X-ray Crystallography and In Silico Docking.
J.Mol.Biol., 427, 2015
4R7D
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Fab Hu 15C1
Descriptor: Fab Hu 15C1 Heavy chain, Fab Hu 15C1 Light chain
Authors:Loyau, J, Didelot, G, Malinge, P, Ravn, U, Magistrelli, G, Depoisier, J.F, Kosco-Vilbois, M, Fischer, N, Thore, S, Rousseau, F.
Deposit date:2014-08-27
Release date:2015-07-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.753 Å)
Cite:Robust Antibody-Antigen Complexes Prediction Generated by Combining Sequence Analyses, Mutagenesis, In Vitro Evolution, X-ray Crystallography and In Silico Docking.
J.Mol.Biol., 427, 2015

 

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