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PDB: 163 results

3GWZ
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BU of 3gwz by Molmil
Structure of the Mitomycin 7-O-methyltransferase MmcR
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, MmcR, ...
Authors:Singh, S, Chang, A, Bingman, C.A, Phillips Jr, G.N, Thorson, J.S.
Deposit date:2009-04-01
Release date:2010-04-07
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural characterization of the mitomycin 7-O-methyltransferase.
Proteins, 79, 2011
5DU2
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BU of 5du2 by Molmil
Structural analysis of EspG2 glycosyltransferase
Descriptor: EspG2 glycosyltransferase
Authors:Michalska, K, Elshahawi, S.I, Bigelow, L, Babnigg, G, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-09-18
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analysis of EspG2 glycosyltransferase
To Be Published
1QZL
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BU of 1qzl by Molmil
GCATGCT + Cobalt
Descriptor: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', COBALT (II) ION
Authors:Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A.
Deposit date:2003-09-17
Release date:2003-10-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Metal Ion Distribution and Stabilisation of the DNA Quadruplex Structure Formed by d(GCATGCT)
To be published
3GXO
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BU of 3gxo by Molmil
Structure of the Mitomycin 7-O-methyltransferase MmcR with bound Mitomycin A
Descriptor: CALCIUM ION, MmcR, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Singh, S, Chang, A, Bingman, C.A, Phillips Jr, G.N, Thorson, J.S.
Deposit date:2009-04-02
Release date:2010-04-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of the mitomycin 7-O-methyltransferase.
Proteins, 79, 2011
1QYL
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BU of 1qyl by Molmil
GCATGCT + Vanadium
Descriptor: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', VANADIUM ION
Authors:Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A.
Deposit date:2003-09-11
Release date:2003-10-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1 Å)
Cite:Metal Ion Distribution and Stabilisation of the DNA Quadruplex Structure Formed by d(GCATGCT)
To be Published
1QYK
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BU of 1qyk by Molmil
GCATGCT + Barium
Descriptor: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', BARIUM ION
Authors:Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A.
Deposit date:2003-09-11
Release date:2003-10-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Metal Ion Distribution and Stabilization of the DNA Quadruplex Structure Formed by d(GCATGCT)
To be published
1R2O
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BU of 1r2o by Molmil
d(GCATGCT) + Ni2+
Descriptor: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', NICKEL (II) ION
Authors:Cardin, J.C, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A.
Deposit date:2003-09-29
Release date:2003-10-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Metal Ion Distribution and Stabilization of the DNA Quadruplex Structure Formed by d(GCATGCT)
To be published
2LUZ
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BU of 2luz by Molmil
Solution NMR Structure of CalU16 from Micromonospora echinospora, Northeast Structural Genomics Consortium (NESG) Target MiR12
Descriptor: CalU16
Authors:Ramelot, T.A, Yang, Y, Lee, H, Pederson, K, Lee, D, Kohan, E, Janjua, H, Xiao, R, Acton, T.B, Everett, J.K, Wrobel, R.L, Bingman, C.A, Singh, S, Thorson, J.S, Prestegard, J.H, Montelione, G.T, Phillips Jr, G.N, Kennedy, M.A, Enzyme Discovery for Natural Product Biosynthesis (NatPro), Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-06-22
Release date:2012-10-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure-Guided Functional Characterization of Enediyne Self-Sacrifice Resistance Proteins, CalU16 and CalU19.
Acs Chem.Biol., 9, 2014
3PKP
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BU of 3pkp by Molmil
Q83S Variant of S. Enterica RmlA with dATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Glucose-1-phosphate thymidylyltransferase, MAGNESIUM ION
Authors:Chang, A, Moretti, R, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-11-11
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Expanding the Nucleotide and Sugar 1-Phosphate Promiscuity of Nucleotidyltransferase RmlA via Directed Evolution.
J.Biol.Chem., 286, 2011
2HDL
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BU of 2hdl by Molmil
Solution structure of Brak/CXCL14
Descriptor: Small inducible cytokine B14
Authors:Peterson, F.C, Thorpe, J.A, Harder, A.G, Volkman, B.F, Schwarze, S.R.
Deposit date:2006-06-20
Release date:2006-10-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Determinants Involved in the Regulation of CXCL14/BRAK Expression by the 26 S Proteasome.
J.Mol.Biol., 363, 2006
4M60
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BU of 4m60 by Molmil
Crystal structure of macrolide glycosyltransferases OleD
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Oleandomycin glycosyltransferase, SODIUM ION
Authors:Olmos Jr, J.L, Martinez III, E, Wang, F, Helmich, K.E, Singh, S, Xu, W, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2013-08-08
Release date:2013-09-04
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of macrolide glycosyltransferases OleD
To be Published
4M7P
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BU of 4m7p by Molmil
Ensemble refinement of protein crystal structure of macrolide glycosyltransferases OleD
Descriptor: Oleandomycin glycosyltransferase, SODIUM ION
Authors:Wang, F, Helmich, K.E, Xu, W, Singh, S, Olmos Jr, J.L, Martinez iii, E, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2013-08-12
Release date:2013-09-11
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of macrolide glycosyltransferases OleD
To be Published
1NT8
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BU of 1nt8 by Molmil
Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 2.00 A
Descriptor: 5'-d(CpCpGpGpTpApCpCpGpG)-3', CALCIUM ION
Authors:Cardin, C.J, Gale, B.C, Thorpe, J.H, Texieira, S.C.M, Gan, Y, Moraes, M.I.A.A, Brogden, A.L.
Deposit date:2003-01-29
Release date:2003-02-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Analysis of two Holliday Junctions formed by the sequences TCGGTACCGA and CCGGTACCGG
To be Published
1NVN
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BU of 1nvn by Molmil
Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 1.8 A
Descriptor: 5'-D(CpCpGpGpTpApCpCpGpG)-3', CALCIUM ION
Authors:Cardin, C.J, Gale, B.C, Thorpe, J.H, Teixeira, S.C.M, Gan, Y, Moraes, M.I.A.A, Brogden, A.L.
Deposit date:2003-02-04
Release date:2003-02-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of two Holliday junctions formed by the sequences TCGGTACCGA and CCGGTACCGG
To be Published
4LY7
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BU of 4ly7 by Molmil
Ancestral RNase H
Descriptor: Ribonuclease H, SULFATE ION
Authors:Hart, K.M, Harms, M.J, Schmidt, B.H, Elya, C, Thornton, J.W, Marqusee, S.
Deposit date:2013-07-30
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Thermodynamic system drift in protein evolution.
Plos Biol., 12, 2014
1NQS
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BU of 1nqs by Molmil
Structural Characterisation of the Holliday Junction formed by the sequence d(TCGGTACCGA) at 1.97 A
Descriptor: 5'-d(TpCpGpGpTpApCpCpGpA)-3', CALCIUM ION
Authors:Cardin, C.J, Gale, B.C, Thorpe, J.H, Texieira, S.C.M, Gan, Y, Moraes, M.I.A.A, Brogden, A.L.
Deposit date:2003-01-22
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural Analysis of two Holliday junctions formed by the sequences TCGGTACCGA and CCGGTACCGG
To be Published
1NVY
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BU of 1nvy by Molmil
Strontium bound to the Holliday junction sequence d(TCGGTACCGA)4
Descriptor: STRONTIUM ION, d(TCGGTACCGA)4
Authors:Cardin, C.J, Thorpe, J.H, Gale, B.C, Teixeira, S.C.M.
Deposit date:2003-02-05
Release date:2003-02-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Strontium, a MAD taerget for the DNA Holliday junction
To be published
1FPW
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BU of 1fpw by Molmil
STRUCTURE OF YEAST FREQUENIN
Descriptor: CALCIUM ION, CALCIUM-BINDING PROTEIN NCS-1
Authors:Ames, J.B, Hendricks, K.B, Strahl, T, Huttner, I.G, Thorner, J.
Deposit date:2000-08-31
Release date:2000-10-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and calcium-binding properties of Frq1, a novel calcium sensor in the yeast Saccharomyces cerevisiae.
Biochemistry, 39, 2000
4XR9
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BU of 4xr9 by Molmil
Crystal structure of CalS8 from Micromonospora echinospora cocrystallized with NAD and TDP-glucose
Descriptor: CalS8, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Michalska, K, Bigelow, L, Endres, M, Babnigg, G, Bingman, C.A, Yennamalli, R.M, Singh, S, Kharel, M.K, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-01-20
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of CalS8 from Micromonospora echinospora
To Be Published
3PKQ
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BU of 3pkq by Molmil
Q83D Variant of S. Enterica RmlA with dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, Glucose-1-phosphate thymidylyltransferase, ...
Authors:Chang, A, Moretti, R, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-11-11
Release date:2011-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Expanding the Nucleotide and Sugar 1-Phosphate Promiscuity of Nucleotidyltransferase RmlA via Directed Evolution.
J.Biol.Chem., 286, 2011
4PIW
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BU of 4piw by Molmil
Crystal structure of sugar aminotransferase WecE from Escherichia coli K-12
Descriptor: TDP-4-keto-6-deoxy-D-glucose transaminase family protein
Authors:Wang, F, Xu, W, Helmich, K.E, Singh, S, Yennamalli, R.M, Miller, M.D, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-05-09
Release date:2014-07-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of sugar aminotransferase WecE from Escherichia coli K-12
To Be Published
2L65
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BU of 2l65 by Molmil
HADDOCK calculated model of the complex of the resistance protein CalC and Calicheamicin-Gamma
Descriptor: 2,4-dideoxy-4-(ethylamino)-3-O-methyl-alpha-L-threo-pentopyranose-(1-2)-4-amino-4,6-dideoxy-beta-D-glucopyranose, 2,6-dideoxy-4-thio-beta-D-allopyranose, 3-O-methyl-alpha-L-rhamnopyranose, ...
Authors:Singh, S, Markley, J.L, Thorson, J.S, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-11-15
Release date:2011-03-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insight into the self-sacrifice mechanism of enediyne resistance.
Acs Chem.Biol., 1, 2006
4Q31
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BU of 4q31 by Molmil
The crystal structure of cystathione gamma lyase (CalE6) from Micromonospora echinospora
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, FORMIC ACID, ...
Authors:Tan, K, Bigelow, L, Jedrzejczak, R, Babnigg, G, Bingman, C.A, Yennamalli, R.M, Singh, S, Kharel, M.K, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-04-10
Release date:2014-05-07
Last modified:2017-03-08
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Structural dynamics of a methionine gamma-lyase for calicheamicin biosynthesis: Rotation of the conserved tyrosine stacking with pyridoxal phosphate.
Struct Dyn, 3, 2016
3OTI
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BU of 3oti by Molmil
Crystal Structure of CalG3, Calicheamicin Glycostyltransferase, TDP and calicheamicin T0 bound form
Descriptor: CHLORIDE ION, CalG3, Calicheamicin T0, ...
Authors:Chang, A, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2010-09-11
Release date:2010-12-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.597 Å)
Cite:Complete set of glycosyltransferase structures in the calicheamicin biosynthetic pathway reveals the origin of regiospecificity.
Proc.Natl.Acad.Sci.USA, 108, 2011
2GKD
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BU of 2gkd by Molmil
Structural insight into self-sacrifice mechanism of enediyne resistance
Descriptor: 5'-D(*CP*TP*AP*TP*CP*AP*TP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*AP*TP*GP*AP*TP*AP*G)-3', CalC
Authors:Singh, S, Thorson, J.S.
Deposit date:2006-04-01
Release date:2006-08-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural insight into the self-sacrifice mechanism of enediyne resistance.
Acs Chem.Biol., 1, 2006

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