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PDB: 27 results

8DAJ
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BU of 8daj by Molmil
Structure and Biochemistry of a Promiscuous Thermophilic Polyhydroxybutyrate Depolymerase from Lihuaxuella thermophilia
Descriptor: 1,2-ETHANEDIOL, Esterase, PHB depolymerase family, ...
Authors:Thomas, G.M, Quirk, S, Huard, D.J.E, Lieberman, R.L.
Deposit date:2022-06-13
Release date:2023-02-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Bioplastic degradation by a polyhydroxybutyrate depolymerase from a thermophilic soil bacterium.
Protein Sci., 31, 2022
5CXZ
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BU of 5cxz by Molmil
SYK catalytic domain complexed with naphthyridine inhibitor
Descriptor: CHLORIDE ION, GLYCEROL, N-{7-[4-(dimethylamino)phenyl]-1,6-naphthyridin-5-yl}propane-1,3-diamine, ...
Authors:Thoma, G, Veenstra, S, Strang, R, Blanz, J, Vangrevelinghe, E, Berghausen, J, Lee, C.C, Zerwes, H.-G.
Deposit date:2015-07-29
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Orally bioavailable Syk inhibitors with activity in a rat PK/PD model.
Bioorg.Med.Chem.Lett., 25, 2015
7ATR
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BU of 7atr by Molmil
The Crystal Structure of YejA - an ABC Peptide Transporter Receptor
Descriptor: GLYCEROL, Uncharacterized protein YejA
Authors:Ackroyd, B.K, Dodson, E.J, Wilkinson, A.J, Thomas, G.T.
Deposit date:2020-10-30
Release date:2021-11-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Crystal Structure of YejA - an ABC Peptide Transporter Receptor
To Be Published
7NR2
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BU of 7nr2 by Molmil
The structure of the SBP TarP_Sse in complex with coumarate
Descriptor: 4'-HYDROXYCINNAMIC ACID, SULFATE ION, TRAP dicarboxylate transporter, ...
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-02
Release date:2021-10-06
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NRR
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BU of 7nrr by Molmil
The structure of the SBP TarP_Csal in complex with caffeate
Descriptor: CAFFEIC ACID, MAGNESIUM ION, TRAP dicarboxylate transporter-DctP subunit
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-04
Release date:2021-10-06
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NSW
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BU of 7nsw by Molmil
The structure of the SBP TarP_Csal in complex with coumarate
Descriptor: 1,2-ETHANEDIOL, 4'-HYDROXYCINNAMIC ACID, MAGNESIUM ION, ...
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-08
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NTD
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BU of 7ntd by Molmil
The structure of the SBP TarP_Csal in complex with ferulate
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, MAGNESIUM ION, SULFATE ION, ...
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-09
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NTE
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BU of 7nte by Molmil
The structure of an open conformation of the SBP TarP_Csal
Descriptor: MAGNESIUM ION, TRAP dicarboxylate transporter-DctP subunit
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-09
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
2CEX
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BU of 2cex by Molmil
Structure of a sialic acid binding protein (SiaP) in the presence of the sialic acid acid analogue Neu5Ac2en
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, GLYCEROL, PROTEIN HI0146, ...
Authors:Muller, A, Severi, E, Mulligan, C, Watts, A.G, Kelly, D.J, Wilson, K.S, Wilkinson, A.J, Thomas, G.H.
Deposit date:2006-02-10
Release date:2006-05-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conservation of Structure and Mechanism in Primary and Secondary Transporters Exemplified by Siap, a Sialic Acid Binding Virulence Factor from Haemophilus Influenzae
J.Biol.Chem., 281, 2006
2CEY
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BU of 2cey by Molmil
Apo Structure of SiaP
Descriptor: PROTEIN HI0146, ZINC ION
Authors:Muller, A, Severi, E, Mulligan, C, Watts, A.G, Kelly, D.J, Wilson, K.S, Wilkinson, A.J, Thomas, G.H.
Deposit date:2006-02-11
Release date:2006-05-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conservation of Structure and Mechanism in Primary and Secondary Transporters Exemplified by Siap, a Sialic Acid Binding Virulence Factor from Haemophilus Influenzae
J.Biol.Chem., 281, 2006
3OYZ
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BU of 3oyz by Molmil
Haloferax volcanii Malate Synthase Pyruvate/Acetyl-CoA Ternary Complex
Descriptor: ACETYL COENZYME *A, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Howard, B.R, Bracken, C, Neighbor, A, Thomas, G, Lamlenn, K.K, Schubert, H.L, Whitby, F.G.
Deposit date:2010-09-24
Release date:2011-06-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of a halophilic archaeal malate synthase from Haloferax volcanii and comparisons with isoforms A and G.
Bmc Struct.Biol., 11, 2011
3OYX
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BU of 3oyx by Molmil
Haloferax volcanii Malate Synthase Magnesium/Glyoxylate Complex
Descriptor: CHLORIDE ION, GLYOXYLIC ACID, MAGNESIUM ION, ...
Authors:Howard, B.R, Bracken, C, Neighbor, A, Thomas, G, Lamlenn, K.K, Schubert, H.L, Whitby, F.G.
Deposit date:2010-09-24
Release date:2011-06-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structures of a halophilic archaeal malate synthase from Haloferax volcanii and comparisons with isoforms A and G.
Bmc Struct.Biol., 11, 2011
3PUG
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BU of 3pug by Molmil
Haloferax volcanii Malate Synthase Native at 3mM Glyoxylate
Descriptor: CHLORIDE ION, GLYOXYLIC ACID, MAGNESIUM ION, ...
Authors:Howard, B.R, Bracken, C.D, Neighbor, A.M, Thomas, G.C, Lamlenn, K.K, Schubert, H.L, Whitby, F.G.
Deposit date:2010-12-04
Release date:2011-06-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of a halophilic archaeal malate synthase from Haloferax volcanii and comparisons with isoforms A and G.
Bmc Struct.Biol., 11, 2011
7NQG
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BU of 7nqg by Molmil
The structure of the SBP TarP_Rhp in complex with 4-hydroxyphenylacetate
Descriptor: 1,2-ETHANEDIOL, 4-HYDROXYPHENYLACETATE, PHOSPHATE ION, ...
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-01
Release date:2021-10-06
Last modified:2022-01-26
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NRA
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BU of 7nra by Molmil
The structure of the SBP TarP_Sse in complex with cinnamate
Descriptor: HYDROCINNAMIC ACID, TRAP dicarboxylate transporter, DctP subunit
Authors:Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
Deposit date:2021-03-03
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
1XT8
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BU of 1xt8 by Molmil
Crystal Structure of Cysteine-Binding Protein from Campylobacter jejuni at 2.0 A Resolution
Descriptor: CYSTEINE, GLYCEROL, putative amino-acid transporter periplasmic solute-binding protein
Authors:Muller, A, Thomas, G.H, Horler, R, Brannigan, J.A, Blagova, E, Levdikov, V.M, Fogg, M.J, Wilson, K.S, Wilkinson, A.J, Structural Proteomics in Europe (SPINE)
Deposit date:2004-10-21
Release date:2005-08-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:An ATP-binding cassette-type cysteine transporter in Campylobacter jejuni inferred from the structure of an extracytoplasmic solute receptor protein.
Mol.Microbiol., 57, 2005
2XRP
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BU of 2xrp by Molmil
Human Doublecortin N-DC Repeat (1MJD) and Mammalian Tubulin (1JFF and 3HKE) Docked into the 8-Angstrom Cryo-EM Map of Doublecortin- Stabilised Microtubules
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, NEURONAL MIGRATION PROTEIN DOUBLECORTIN, ...
Authors:Fourniol, F.J, Sindelar, C.V, Amigues, B, Clare, D.K, Thomas, G, Perderiset, M, Francis, F, Houdusse, A, Moores, C.A.
Deposit date:2010-09-18
Release date:2010-11-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Template-Free 13-Protofilament Microtubule-Map Assembly Visualized at 8 A Resolution.
J.Cell Biol., 191, 2010
2HI5
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BU of 2hi5 by Molmil
Model for bacteriophage fd from cryo-EM
Descriptor: Coat protein B
Authors:Wang, Y.A, Yu, X, Overman, S, Tsuboi, M, Thomas, G.J, Egelman, E.H.
Deposit date:2006-06-29
Release date:2007-08-07
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (8 Å)
Cite:The Structure of a Filamentous Bacteriophage
J.Mol.Biol., 361, 2006
2UVK
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BU of 2uvk by Molmil
Structure of YjhT
Descriptor: YJHT
Authors:Muller, A, Severi, E, Wilson, K.S, Thomas, G.H.
Deposit date:2007-03-12
Release date:2007-12-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Sialic Acid Mutarotation is Catalyzed by the Escherichia Coli Beta-Propeller Protein Yjht.
J.Biol.Chem., 283, 2008
2VK2
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BU of 2vk2 by Molmil
Crystal structure of a galactofuranose binding protein
Descriptor: ABC TRANSPORTER PERIPLASMIC-BINDING PROTEIN YTFQ, beta-D-galactofuranose
Authors:Muller, A, Horler, R.S.P, Thomas, G.H, Wilson, K.S.
Deposit date:2007-12-16
Release date:2009-05-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Furanose-Specific Sugar Transport: Characterization of a Bacterial Galactofuranose-Binding Protein.
J.Biol.Chem., 284, 2009
4AXV
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BU of 4axv by Molmil
Biochemical and structural characterization of the MpaA amidase as part of a conserved scavenging pathway for peptidoglycan derived peptides in gamma-proteobacteria
Descriptor: 1,2-ETHANEDIOL, MPAA, ZINC ION
Authors:Maqbool, A, Herve, M, Mengin-Lecreulx, D, Dodson, E, Wilkinson, A.J, Thomas, G.H.
Deposit date:2012-06-14
Release date:2012-09-26
Last modified:2020-03-04
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Mpaa is a Murein-Tripeptide-Specific Zinc Carboxypeptidase that Functions as Part of a Catabolic Pathway for Peptidoglycan Derived Peptides in Gamma-Proteobacteria.
Biochem.J., 448, 2012
3O9P
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BU of 3o9p by Molmil
The structure of the Escherichia coli murein tripeptide binding protein MppA
Descriptor: L-ALA-GAMMA-D-GLU-MESO-DIAMINOPIMELIC ACID, Periplasmic murein peptide-binding protein, ZINC ION
Authors:Maqbool, A, Levdikov, V.M, Blagova, E.V, Wilkinson, A.J, Thomas, G.H.
Deposit date:2010-08-04
Release date:2011-07-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Compensating Stereochemical Changes Allow Murein Tripeptide to Be Accommodated in a Conventional Peptide-binding Protein.
J.Biol.Chem., 286, 2011
6SE1
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BU of 6se1 by Molmil
Structure of Salmonella ser. Paratyphi A lipopolysaccharide acetyltransferase periplasmic domain
Descriptor: DI(HYDROXYETHYL)ETHER, Putative lipopolysaccharide modification acyltransferase, SULFATE ION
Authors:Tindall, S.N, Pearson, C, Herman, R, Jenkins, H.T, Thomas, G.H, Potts, J.R, Van der Woude, M.
Deposit date:2019-07-29
Release date:2020-08-26
Last modified:2020-09-16
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Acetylation of Surface Carbohydrates in Bacterial Pathogens Requires Coordinated Action of a Two-Domain Membrane-Bound Acyltransferase.
Mbio, 11, 2020
6QP3
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BU of 6qp3 by Molmil
Crystal structure of the PLP-bound C-S lyase from Bacillus subtilis (strain 168)
Descriptor: ACETATE ION, Cystathionine beta-lyase PatB, PYRIDOXAL-5'-PHOSPHATE
Authors:Herman, R, Rudden, M, Wilkinson, A.J, Hanai, S, Thomas, G.H.
Deposit date:2019-02-13
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The molecular basis of thioalcohol production in human body odour.
Sci Rep, 10, 2020
6QP2
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BU of 6qp2 by Molmil
Crystal structure of the PLP-bound C-S lyase from Staphylococcus hominis
Descriptor: Aminotransferase, PYRIDOXAL-5'-PHOSPHATE, Polyhistidine tag
Authors:Herman, R, Rudden, M, Wilkinson, A.J, Hanai, S, Thomas, G.H.
Deposit date:2019-02-13
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The molecular basis of thioalcohol production in human body odour.
Sci Rep, 10, 2020

 

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