1K1R
| HETERODUPLEX OF CHIRALLY PURE R-METHYLPHOSPHONATE/DNA DUPLEX | Descriptor: | 5'-D(*CP*(CMR)P*(RMP)P*(RMP)P*(RMP)P*(CMR)P*(RMP))-3', 5'-D(*TP*GP*TP*TP*TP*GP*GP*C)-3' | Authors: | Thiviyanathan, V, Vyazovkina, K.V, Gozansky, E.K, Bichenkova, E, Abramova, T.V, Luxon, B.A, Lebedev, A.V, Gorenstein, D.G. | Deposit date: | 2001-09-25 | Release date: | 2002-06-19 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structure of hybrid backbone methylphosphonate DNA heteroduplexes: effect of R and S stereochemistry. Biochemistry, 41, 2002
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1K1H
| HETERODUPLEX OF CHIRALLY PURE METHYLPHOSPHONATE/DNA DUPLEX | Descriptor: | 5'-D(*CP*(CMR)P*(RMP)P*(RMP)P*(SMP)P*(CMR)P*(RMP))-3', 5'-D(*TP*GP*TP*TP*TP*GP*GP*C)-3' | Authors: | Thiviyanathan, V, Vyazovkina, K.V, Gozansky, E.K, Bichenchova, E, Abramova, T.V, Luxon, B.A, Lebedev, A.V, Gorenstein, D.G. | Deposit date: | 2001-09-25 | Release date: | 2002-06-19 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structure of hybrid backbone methylphosphonate DNA heteroduplexes: effect of R and S stereochemistry. Biochemistry, 41, 2002
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1T28
| High resolution structure of a picornaviral internal cis-acting replication element | Descriptor: | 34-MER | Authors: | Thiviyanathan, V, Yang, Y, Kaluarachchi, K, Reynbrand, R, Gorenstein, D.G, Lemon, S.M. | Deposit date: | 2004-04-20 | Release date: | 2004-08-10 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | High resolution structure of a picornaviral internal cis-acting replication element(cre). Proc.Natl.Acad.Sci.USA, 101, 2004
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2KD8
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1EKW
| NMR STRUCTURE OF A DNA THREE-WAY JUNCTION | Descriptor: | DNA (5'-D(*CP*GP*GP*TP*GP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*CP*AP*CP*CP*G)-3'), DNA (5'-D(*GP*GP*AP*CP*GP*TP*CP*GP*CP*AP*GP*C)-3') | Authors: | Thiviyanathan, V, Luxon, B.A, Leontis, N.B, Donne, D, Gorenstein, D.G. | Deposit date: | 2000-03-09 | Release date: | 2000-03-20 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Hybrid-hybrid matrix structural refinement of a DNA three-way junction from 3D NOESY-NOESY. J.Biomol.NMR, 14, 1999
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1N2W
| Solution Structure of 8OG:G mismatch containing duplex | Descriptor: | 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(8OG)P*GP*CP*G)-3' | Authors: | Thiviyanathan, V, Somasunderam, A.D, Hazra, T.K, Mitra, S, Gorenstein, D.G. | Deposit date: | 2002-10-24 | Release date: | 2002-11-13 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution Structure of a DNA Duplex Containing 8-Hydroxy-2'-Deoxyguanosine Opposite Deoxyguanosine J.Mol.Biol., 325, 2003
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1K8S
| BULGED ADENOSINE IN AN RNA DUPLEX | Descriptor: | 5'-R(*GP*CP*GP*GP*CP*AP*CP*CP*UP*GP*CP*C)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*UP*GP*CP*CP*GP*C)-3' | Authors: | Thiviyanathan, V, Guliaev, A.B, Leontis, N.B, Gorenstein, D.G. | Deposit date: | 2001-10-25 | Release date: | 2001-11-14 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution conformation of a bulged adenosine base in an RNA duplex by relaxation matrix refinement. J.Mol.Biol., 300, 2000
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2H0P
| NMR Structure of the Dengue-4 virus Envelope Protein Domain III | Descriptor: | Envelope glycoprotein | Authors: | Volk, D.E, Lee, Y, Li, X, Thiviyanathan, V, Barrett, A.D.T, Gorenstein, D.G. | Deposit date: | 2006-05-15 | Release date: | 2007-03-27 | Last modified: | 2022-03-09 | Method: | SOLUTION NMR | Cite: | Solution structure of the envelope protein domain III of dengue-4 virus. Virology, 364, 2007
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1OZO
| Three-dimensional solution structure of apo-S100P protein determined by NMR spectroscopy | Descriptor: | S-100P protein | Authors: | Lee, Y.-C, Volk, D.E, Thiviyanathan, V, Kleerekoper, Q, Gribenko, A.V, Zhang, S, Gorenstein, D.G, Makhatadze, G.I, Luxon, B.A. | Deposit date: | 2003-04-09 | Release date: | 2004-04-20 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | NMR structure of the Apo-S100P protein. J.Biomol.Nmr, 29, 2004
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1R4H
| NMR Solution structure of the IIIc domain of GB Virus B IRES Element | Descriptor: | 5'-R(*GP*GP*GP*CP*AP*AP*GP*CP*CP*C)-3' | Authors: | Kaluarachchi, K, Thiviyanathan, V, Rijinbrand, R, Lemon, S.M, Gorenstein, D.G. | Deposit date: | 2003-10-06 | Release date: | 2004-10-19 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Mutational and structural analysis of stem-loop IIIC of the hepatitis C virus and GB virus B internal ribosome entry sites. J.Mol.Biol., 343, 2004
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1N8C
| Solution Structure of a Cis-Opened (10R)-N6-Deoxyadenosine Adduct of (9S,10R)-(9,10)-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA Duplex | Descriptor: | (9S,10R)-9-HYDROXY-7,8,9,10-TETRAHYDROBENZO[A]PYRENE, 5'-D(*CP*CP*TP*CP*GP*TP*GP*AP*CP*CP*G)-3', 5'-D(*CP*GP*GP*TP*CP*AP*CP*GP*AP*GP*G)-3' | Authors: | Volk, D.E, Thiviyanathan, V, Rice, J.S, Luxon, B.A, Shah, J.H, Yagi, H, Sayer, J.M, Yeh, H.J.C, Jerina, D.M, Gorenstein, D.G. | Deposit date: | 2002-11-20 | Release date: | 2003-02-14 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution Structure of a Cis-Opened (10R)-N6-Deoxyadenosine Adduct of (9S,10R)-(9,10)-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA Duplex Biochemistry, 42, 2003
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