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PDB: 31 results
6VDH
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BU of 6vdh by Molmil
Crystal structure of ancestral apicomplexan lactate dehydrogenase in alternate dimer configuration with sulfate.
Descriptor: SULFATE ION, lactate dehydrogenase
Authors:Theobald, D.L, Wirth, J.D, Classen, S, Perlmutter, N.
Deposit date:2019-12-27
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mechanism of Bifunctionality in an Ancestral Apicomplexan Malate/Lactate Dehydrogenase
To Be Published
6VDI
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BU of 6vdi by Molmil
Crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate.
Descriptor: SULFATE ION, lactate dehydrogenase
Authors:Theobald, D.L, Wirth, J.D, Classen, S, Perlmutter, N.
Deposit date:2019-12-27
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of Bifunctionality in an Ancestral Apicomplexan Malate/Lactate Dehydrogenase
To Be Published
6VDJ
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BU of 6vdj by Molmil
Crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate and NADH4.
Descriptor: 1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, SULFATE ION, lactate dehydrogenase
Authors:Theobald, D.L, Wirth, J.D, Classen, S, Perlmutter, N.
Deposit date:2019-12-27
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of Bifunctionality in an Ancestral Apicomplexan Malate/Lactate Dehydrogenase
To Be Published
1PH1
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BU of 1ph1 by Molmil
CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGGGT
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', Telomere-binding protein alpha subunit, Telomere-binding protein beta subunit
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Nucleotide Shuffling and Ssdna Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
1PH2
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BU of 1ph2 by Molmil
CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
1PH4
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BU of 1ph4 by Molmil
CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGCG
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*CP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
1PH3
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BU of 1ph3 by Molmil
CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGTG
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*TP*G)-3', SODIUM ION, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
1PH5
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BU of 1ph5 by Molmil
CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG(3DR)GG
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*(3DR)P*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
1PH7
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BU of 1ph7 by Molmil
CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGIGG
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*IP*GP*G)-3', CHLORIDE ION, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
1PA6
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BU of 1pa6 by Molmil
Crystal structure of the OXYTRICHA nova telomere end-binding protein complexed with noncognate ssDNA GGGGTTTTGAGG
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*AP*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', CHLORIDE ION, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-13
Release date:2003-06-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Nucleotide shuffling and ssDNA recognition in Oxytricha nova telomere end-binding protein complexes
Embo J., 22, 2003
1PH8
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BU of 1ph8 by Molmil
CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGCGG
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*CP*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Nucleotide Shuffling and Ssdna Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
1PH9
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BU of 1ph9 by Molmil
CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGAGG
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*AP*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
1PH6
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BU of 1ph6 by Molmil
Crystal Structure of THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGTGG
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*TP*GP*G)-3', SODIUM ION, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
1PHJ
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BU of 1phj by Molmil
CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GG(3DR)GTTTTGGGG
Descriptor: 5'-D(*GP*GP*(3DR)P*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', Telomere-binding protein alpha subunit, ...
Authors:Theobald, D.L, Schultz, S.C.
Deposit date:2003-05-29
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003
4UUM
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BU of 4uum by Molmil
Apo trichomonas vaginalis lactate dehydrogenase
Descriptor: L-LACTATE DEHYDROGENASE
Authors:Steindel, P.A, Chen, E.H, Theobald, D.L.
Deposit date:2014-07-29
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.368 Å)
Cite:Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
1S40
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BU of 1s40 by Molmil
SOLUTION STRUCTURE OF THE CDC13 DNA-BINDING DOMAIN COMPLEXED WITH A SINGLE-STRANDED TELOMERIC DNA 11-MER
Descriptor: 5'-D(*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*G)-3', Cell division control protein 13
Authors:Mitton-Fry, R.M, Anderson, E.M, Theobald, D.L, Glustrom, L.W, Wuttke, D.S.
Deposit date:2004-01-14
Release date:2004-05-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis for telomeric single-stranded DNA recognition by yeast Cdc13
J.Mol.Biol., 338, 2004
6CT6
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BU of 6ct6 by Molmil
Crystal structure of lactate dehydrogenase from Eimeria maxima with NADH and oxamate
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Lactate dehydrogenase, OXAMIC ACID, ...
Authors:Wirth, J.D, Xu, C, Theobald, D.L.
Deposit date:2018-03-22
Release date:2019-03-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.705 Å)
Cite:The Mechanistic, Structural, and Evolutionary Origin of Lactate Dehydrogenase Substrate Specificity in Apicomplexa
To Be Published
4UUN
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BU of 4uun by Molmil
Trichomonas vaginalis lactate dehydrogenase in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, L-LACTATE DEHYDROGENASE
Authors:Steindel, P.A, Chen, E.H, Theobald, D.L.
Deposit date:2014-07-29
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
4UUO
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BU of 4uuo by Molmil
Apo Trichomonas vaginalis malate dehydrogenase
Descriptor: CYTOSOLIC MALATE DEHYDROGENASE
Authors:Steindel, P.A, Chen, E.H, Theobald, D.L.
Deposit date:2014-07-29
Release date:2015-08-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.842 Å)
Cite:Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
4PLH
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BU of 4plh by Molmil
Crystal structure of ancestral apicomplexan malate dehydrogenase with oxamate.
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, OXAMIC ACID, SODIUM ION, ...
Authors:Boucher, J.I, Jacobowitz, J.R, Beckett, B.C, Classen, S, Theobald, D.L.
Deposit date:2014-05-16
Release date:2014-07-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An atomic-resolution view of neofunctionalization in the evolution of apicomplexan lactate dehydrogenases.
Elife, 3, 2014
4UEU
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BU of 4ueu by Molmil
Tyrosine kinase AS - a common ancestor of Src and Abl
Descriptor: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, TYROSINE KINASE AS - A COMMON ANCESTOR OF SRC AND ABL
Authors:Kutter, S, Wilson, C, Agafonov, R.V, Hoemberger, M.S, Zorba, A, Halpin, J.C, Theobald, D.L, Kern, D.
Deposit date:2014-12-18
Release date:2015-02-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Kinase Dynamics. Using Ancient Protein Kinases to Unravel a Modern Cancer Drug'S Mechanism.
Science, 347, 2015
4UUP
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BU of 4uup by Molmil
Reconstructed ancestral trichomonad malate dehydrogenase in complex with NADH, SO4, and PO4
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MALATE DEHYDROGENASE, PHOSPHATE ION, ...
Authors:Steindel, P.A, Chen, E.H, Theobald, D.L.
Deposit date:2014-07-29
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.543 Å)
Cite:Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
5A1T
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BU of 5a1t by Molmil
Trichomonas vaginalis lactate dehydrogenase in complex with NADH and oxamate
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, L-LACTATE DEHYDROGENASE, OXAMIC ACID
Authors:Steindel, P.A, Chen, E.H, Theobald, D.L.
Deposit date:2015-05-05
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.
Protein Sci., 25, 2016
4PLC
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BU of 4plc by Molmil
Crystal structure of ancestral apicomplexan lactate dehydrogenase with malate.
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PYRUVIC ACID, ...
Authors:Boucher, J.I, Jacobowitz, J.R, Beckett, B.C, Classen, S, Theobald, D.L.
Deposit date:2014-05-16
Release date:2014-07-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:An atomic-resolution view of neofunctionalization in the evolution of apicomplexan lactate dehydrogenases.
Elife, 3, 2014
4PLT
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BU of 4plt by Molmil
Crystal structure of ancestral apicomplexan malate dehydrogenase with oxamate.
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, OXAMIC ACID, malate dehydrogenase
Authors:Boucher, J.I, Jacobowitz, J.R, Beckett, B.C, Classen, S, Theobald, D.L.
Deposit date:2014-05-19
Release date:2014-07-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An atomic-resolution view of neofunctionalization in the evolution of apicomplexan lactate dehydrogenases.
Elife, 3, 2014

 

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PDB entries from 2024-11-13

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