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PDB: 460 results

2YWG
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Crystal structure of GTP-bound LepA from Aquifex aeolicus
Descriptor: GTP-binding protein LepA, GUANOSINE-5'-TRIPHOSPHATE
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
1WHQ
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BU of 1whq by Molmil
Solution structure of the N-terminal dsRBD from hypothetical protein BAB28848
Descriptor: RNA helicase A
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal dsRBD from hypothetical protein BAB28848
To be Published
1WI8
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BU of 1wi8 by Molmil
Solution structure of the RNA binding domain of eukaryotic initiation factor 4B
Descriptor: Eukaryotic translation initiation factor 4B
Authors:Suzuki, S, Muto, Y, Nagata, T, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain of eukaryotic initiation factor 4B
To be Published
2YQE
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BU of 2yqe by Molmil
Solution structure of the ARID domain of JARID1D protein
Descriptor: Jumonji/ARID domain-containing protein 1D
Authors:Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2008-04-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the ARID domain of JARID1D protein
To be Published
2YTB
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BU of 2ytb by Molmil
Solution structure of C2H2 type Zinc finger domain 5 in Zinc finger protein 32
Descriptor: ZINC ION, Zinc finger protein 32
Authors:Kasahara, N, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of C2H2 type Zinc finger domain 5 in Zinc finger protein 32
To be Published
2YQM
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BU of 2yqm by Molmil
Solution structure of the FYVE domain in zinc finger FYVE domain-containing protein 12
Descriptor: RUN and FYVE domain-containing protein 1, ZINC ION
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the FYVE domain in zinc finger FYVE domain-containing protein 12
To be Published
1WZ7
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BU of 1wz7 by Molmil
Crystal structure of enhancer of rudimentary homologue (ERH)
Descriptor: Enhancer of rudimentary homolog
Authors:Arai, R, Kukimoto-Niino, M, Uda-Tochio, H, Morita, S, Uchikubo-Kamo, T, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-02-26
Release date:2005-05-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of an enhancer of rudimentary homolog (ERH) at 2.1 Angstroms resolution.
Protein Sci., 14, 2005
1WHU
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BU of 1whu by Molmil
Solution structure of the alpha-helical domain from mouse hypothetical PNPase
Descriptor: polynucleotide phosphorylase; 3'-5' RNA exonuclease
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the alpha-helical domain from mouse hypothetical PNPase
To be Published
2YYO
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BU of 2yyo by Molmil
Crystal structure of human SPRY domain
Descriptor: SPRY domain-containing protein 3
Authors:Kishishita, S, Uchikubo-Kamo, T, Murayama, K, Terada, T, Chen, L, Fu, Z.Q, Chrzas, J, Shirouzu, M, Wang, B.C, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-30
Release date:2008-05-06
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of human SPRY domain
To be Published
2Z14
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Crystal structure of the N-terminal DUF1126 in human ef-hand domain containing 2 protein
Descriptor: EF-hand domain-containing family member C2
Authors:Saito, K, Olsen, S, Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-08
Release date:2007-11-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of the N-terminal DUF1126 in human ef-hand domain containing 2 protein
To be Published
3VR2
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BU of 3vr2 by Molmil
Crystal structure of nucleotide-free A3B3 complex from Enterococcus hirae V-ATPase [eA3B3]
Descriptor: V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
Authors:Arai, S, Saijo, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
1WI6
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BU of 1wi6 by Molmil
Solution structure of the RNA binding domain from mouse hypothetical protein BAB23670
Descriptor: Hypothetical protein (RIKEN cDNA 1300006N24)
Authors:Suzuki, S, Muto, Y, Nagata, T, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2005-06-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain from mouse hypothetical protein BAB23670
To be Published
2ZBP
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BU of 2zbp by Molmil
Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus in complex with S-adenosyl-L-methionine
Descriptor: Ribosomal protein L11 methyltransferase, S-ADENOSYLMETHIONINE
Authors:Kaminishi, T, Sakai, H, Takemoto-Hori, C, Terada, T, Nakagawa, N, Maoka, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-26
Release date:2008-11-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus
To be Published
2ZBQ
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BU of 2zbq by Molmil
Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus in complex with S-adenosyl-L-homocysteine
Descriptor: Ribosomal protein L11 methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Kaminishi, T, Sakai, H, Takemoto-Hori, C, Terada, T, Nakagawa, N, Maoka, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-26
Release date:2008-11-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus
To be Published
3VR3
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BU of 3vr3 by Molmil
Crystal structure of AMP-PNP bound A3B3 complex from Enterococcus hirae V-ATPase [bA3B3]
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, V-type sodium ATPase catalytic subunit A, ...
Authors:Arai, S, Saijo, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
1WHN
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BU of 1whn by Molmil
Solution structure of the dsRBD from hypothetical protein BAB26260
Descriptor: hypothetical protein RIKEN cDNA 2310016K04
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the dsRBD from hypothetical protein BAB26260
To be Published
2RT9
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BU of 2rt9 by Molmil
Solution structure of a regulatory domain of meiosis inhibitor
Descriptor: F-box only protein 43, ZINC ION
Authors:Shoji, S, Muto, Y, Ikeda, M, He, F, Tsuda, K, Ohsawa, N, Akasaka, R, Terada, T, Wakiyama, M, Shirouzu, M, Yokoyama, S.
Deposit date:2013-07-05
Release date:2014-07-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The zinc-binding region (ZBR) fragment of Emi2 can inhibit APC/C by targeting its association with the coactivator Cdc20 and UBE2C-mediated ubiquitylation
FEBS Open Bio, 4, 2014
1WHW
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BU of 1whw by Molmil
Solution structure of the N-terminal RNA binding domain from hypothetical protein BAB23448
Descriptor: hypothetical protein RIKEN CDNA 1200009A02
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal RNA binding domain from hypothetical protein BAB23448
To be Published
3VR5
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BU of 3vr5 by Molmil
Crystal structure of nucleotide-free Enterococcus hirae V1-ATPase [eV1(L)]
Descriptor: V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, V-type sodium ATPase subunit D, ...
Authors:Saijo, S, Arai, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
1WHX
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BU of 1whx by Molmil
Solution structure of the second RNA binding domain from hypothetical protein BAB23448
Descriptor: hypothetical protein RIKEN CDNA 1200009A02
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second RNA binding domain from hypothetical protein BAB23448
To be Published
1WHY
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BU of 1why by Molmil
Solution structure of the RNA recognition motif from hypothetical RNA binding protein BC052180
Descriptor: hypothetical protein RIKEN cDNA 1810017N16
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA recognition motif from hypothetical RNA binding protein BC052180
To be Published
1WKI
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solution structure of ribosomal protein L16 from thermus thermophilus HB8
Descriptor: LSU ribosomal protein L16P
Authors:Nishimura, M, Yoshida, T, Shirouzu, M, Terada, T, Kuramitsu, S, Yokoyama, S, Ohkubo, T, Kobayashi, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-31
Release date:2004-12-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of Ribosomal Protein L16 from Thermus thermophilus HB8
J.Mol.Biol., 344, 2004
3WU5
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Reduced E.coli Lon Proteolytic domain
Descriptor: Lon protease, SULFATE ION
Authors:Nishii, W, Kukimoto-Niino, M, Terada, T, Shirouzu, M, Muramatsu, T, Yokoyama, S.
Deposit date:2014-04-22
Release date:2014-11-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:A redox switch shapes the Lon protease exit pore to facultatively regulate proteolysis.
Nat. Chem. Biol., 11, 2015
3WU3
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BU of 3wu3 by Molmil
Reduced-form structure of E.coli Lon Proteolytic domain
Descriptor: Lon protease, SULFATE ION
Authors:Nishii, W, Kukimoto-Niino, M, Terada, T, Shirouzu, M, Muramatsu, T, Yokoyama, S.
Deposit date:2014-04-22
Release date:2014-11-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:A redox switch shapes the Lon protease exit pore to facultatively regulate proteolysis.
Nat. Chem. Biol., 11, 2015
2YYN
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Crystal structure of human bromodomain protein
Descriptor: Transcription intermediary factor 1-alpha
Authors:Kishishita, S, Uchikubo-Kamo, T, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-30
Release date:2008-05-06
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human bromodomain protein
To be Published

224004

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