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PDB: 437 件

1MQX
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NMR Solution Structure of Type-B Lantibiotics Mersacidin in MeOH/H2O Mixture
分子名称: LANTIBIOTIC MERSACIDIN
著者Hsu, S.-T, Breukink, E, Bierbaum, G, Sahl, H.-G, de Kruijff, B, Kaptein, R, van Nuland, N.A, Bonvin, A.M.
登録日2002-09-17
公開日2003-03-11
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献NMR Study of Mersacidin and Lipid II Interaction in Dodecylphosphocholine Micelles. Conformational Changes are a Key to Antimicrobial Activity
J.Biol.Chem., 278, 2003
1N1Q
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Crystal structure of a Dps protein from Bacillus brevis
分子名称: DPS Protein, MU-OXO-DIIRON
著者Ren, B, Tibbelin, G, Kajino, T, Asami, O, Ladenstein, R.
登録日2002-10-19
公開日2003-05-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Multi-layered Structure of Dps with a Novel Di-nuclear Ferroxidase Center
J.Mol.Biol., 329, 2003
1MQZ
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NMR solution structure of type-B lantibiotics mersacidin bound to lipid II in DPC micelles
分子名称: LANTIBIOTIC MERSACIDIN
著者Hsu, S.-T, Breukink, E, Bierbaum, G, Sahl, H.-G, de Kruijff, B, Kaptein, R, van Nuland, N.A, Bonvin, A.M.
登録日2002-09-17
公開日2003-03-11
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献NMR Study of Mersacidin and Lipid II Interaction in Dodecylphosphocholine Micelles. Conformational Changes are a Key to Antimicrobial Activity
J.Biol.Chem., 278, 2003
4V7G
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Crystal Structure of Lumazine Synthase from Bacillus Anthracis
分子名称: 6,7-dimethyl-8-ribityllumazine synthase, PHOSPHATE ION
著者Morgunova, E, Illarionov, B, Saller, S, Popov, A, Sambaiah, T, Bacher, A, Cushman, M, Fischer, M, Ladenstein, R.
登録日2009-09-16
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural study and thermodynamic characterization of inhibitor binding to lumazine synthase from Bacillus anthracis.
Acta Crystallogr.,Sect.D, 66, 2010
1MQY
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NMR solution structure of type-B lantibiotics mersacidin in DPC micelles
分子名称: LANTIBIOTIC MERSACIDIN
著者Hsu, S.-T, Breukink, E, Bierbaum, G, Sahl, H.-G, de Kruijff, B, Kaptein, R, van Nuland, N.A, Bonvin, A.M.
登録日2002-09-17
公開日2003-03-11
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献NMR Study of Mersacidin and Lipid II Interaction in Dodecylphosphocholine Micelles. Conformational Changes are a Key to Antimicrobial Activity
J.Biol.Chem., 278, 2003
2GEQ
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BU of 2geq by Molmil
Crystal Structure of a p53 Core Dimer Bound to DNA
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*GP*CP*GP*TP*GP*AP*GP*CP*AP*TP*GP*CP*TP*CP*AP*C)-3', Cellular tumor antigen p53, ...
著者Ho, W.C, Fitzgerald, M.X, Marmorstein, R.
登録日2006-03-20
公開日2006-05-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the p53 Core Domain Dimer Bound to DNA.
J.Biol.Chem., 281, 2006
4PO2
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Crystal Structure of the Stress-Inducible Human Heat Shock Protein HSP70 Substrate-Binding Domain in Complex with Peptide Substrate
分子名称: HSP70 substrate peptide, Heat shock 70 kDa protein 1A/1B, PHOSPHATE ION, ...
著者Zhang, P, Leu, J.I, Murphy, M.E, George, D.L, Marmorstein, R.
登録日2014-02-24
公開日2014-08-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the stress-inducible human heat shock protein 70 substrate-binding domain in complex with Peptide substrate.
Plos One, 9, 2014
4PZT
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Crystal structure of p300 histone acetyltransferase domain in complex with an inhibitor, Acetonyl-Coenzyme A
分子名称: DIMETHYL SULFOXIDE, Histone acetyltransferase p300, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-2,2-DIMETHYL-4-OXO-4-{[3-OXO-3-({2-[(2-OXOPROPYL)THIO]ETHYL}AMINO)PROPYL]AMINO}BUTYL DIHYDROGEN DIPHOSPHATE
著者Maksimoska, J, Marmorstein, R.
登録日2014-03-31
公開日2014-06-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the p300 Histone Acetyltransferase Bound to Acetyl-Coenzyme A and Its Analogues.
Biochemistry, 53, 2014
6OVH
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Cryo-EM structure of Bimetallic dodecameric cage design 3 (BMC3) from cytochrome cb562
分子名称: ACETOHYDROXAMIC ACID, FE (III) ION, HEME C, ...
著者Golub, E, Subramanian, R.H, Yan, X, Alberstein, R.G, Tezcan, F.A.
登録日2019-05-07
公開日2020-01-29
最終更新日2020-02-19
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Constructing protein polyhedra via orthogonal chemical interactions.
Nature, 578, 2020
7OJM
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BU of 7ojm by Molmil
CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) CATALYTICALLY INACTIVE H251A VARIANT COMPLEXED WITH 2-METHYL-QUINOLIN-4(1H)-ONE UNDER NORMOXIC CONDITIONS
分子名称: 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase, 2-methyl-quinolin-4(1H)-one, GLYCEROL, ...
著者Bui, S, Steiner, R.A.
登録日2021-05-16
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Evolutionary adaptation from hydrolytic to oxygenolytic catalysis at the alpha / beta-hydrolase fold.
Chem Sci, 14, 2023
7OKZ
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CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) CATALYTICALLY INACTIVE H251A VARIANT COMPLEXED WITH 2-METHYL- QUINOLIN-4(1H)-ONE UNDER HYPEROXIC CONDITIONS
分子名称: 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase, 2-methyl-quinolin-4(1H)-one, D(-)-TARTARIC ACID, ...
著者Bui, S, Steiner, R.A.
登録日2021-05-18
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Evolutionary adaptation from hydrolytic to oxygenolytic catalysis at the alpha / beta-hydrolase fold.
Chem Sci, 14, 2023
8A97
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ROOM TEMPERATURE CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) UNDER XENON PRESSURE (30 bar)
分子名称: 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase, D(-)-TARTARIC ACID, XENON
著者Bui, S, Prange, T, Steiner, R.A.
登録日2022-06-27
公開日2023-07-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.897 Å)
主引用文献Evolutionary adaptation from hydrolytic to oxygenolytic catalysis at the alpha / beta-hydrolase fold.
Chem Sci, 14, 2023
6POE
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Structure of ACLY in complex with CoA
分子名称: ATP-citrate synthase, COENZYME A
著者Wei, X, Marmorstein, R.
登録日2019-07-03
公開日2019-12-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
6POF
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BU of 6pof by Molmil
Structure of human ATP citrate lyase
分子名称: ATP-citrate synthase
著者Wei, X, Marmorstein, R.
登録日2019-07-03
公開日2020-01-01
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
6PPL
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BU of 6ppl by Molmil
Cryo-EM structure of human NatE complex (NatA/Naa50)
分子名称: ACETYL COENZYME *A, INOSITOL HEXAKISPHOSPHATE, N-alpha-acetyltransferase 10, ...
著者Deng, S, Marmorstein, R.
登録日2019-07-08
公開日2020-02-19
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Molecular basis for N-terminal acetylation by human NatE and its modulation by HYPK.
Nat Commun, 11, 2020
6PW9
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Cryo-EM structure of human NatE/HYPK complex
分子名称: ACETYL COENZYME *A, Huntingtin-interacting protein K, INOSITOL HEXAKISPHOSPHATE, ...
著者Deng, S, Marmorstein, R.
登録日2019-07-22
公開日2020-02-19
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (4.03 Å)
主引用文献Molecular basis for N-terminal acetylation by human NatE and its modulation by HYPK.
Nat Commun, 11, 2020
6O07
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BU of 6o07 by Molmil
Structure and mechanism of acetylation by the N-terminal dual enzyme NatA/Naa50 complex
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETYL COENZYME *A, CHLORIDE ION, ...
著者Deng, S, Marmorstein, R.
登録日2019-02-15
公開日2019-06-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Structure and Mechanism of Acetylation by the N-Terminal Dual Enzyme NatA/Naa50 Complex.
Structure, 27, 2019
6EBC
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BU of 6ebc by Molmil
OhrB (Organic Hydroperoxide Resistance protein) wild type from Chromobacterium violaceum and reduced by DTT
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, Organic hydroperoxide resistance protein
著者Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S.
登録日2018-08-06
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
6EB3
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Structural and enzymatic characterization of an esterase from a metagenomic library
分子名称: 1,2-ETHANEDIOL, 1,3-dihydroxypropan-2-yl butanoate, 2-hydroxypropane-1,3-diyl dibutanoate, ...
著者Guzzo, C.R, Carvalho, C.F, Teixeira, R.D, Farah, C.S.
登録日2018-08-03
公開日2019-08-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Functional and Structural characterisation of an Esterase from Amazonian Dark Soil
To Be Published
6EBG
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Ohr (Organic Hydroperoxide Resistance protein) mutant - C60S interacting with dihydrolipoamide
分子名称: (6S)-6,8-disulfanyloctanamide, Organic hydroperoxide resistance protein
著者Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S.
登録日2018-08-06
公開日2020-02-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
6EBD
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OhrB (Organic Hydroperoxide Resistance protein) mutant (C60A) from Chromobacterium violaceum, interacting with dihydrolipoamide
分子名称: (6S)-6,8-disulfanyloctanamide, CHLORIDE ION, Organic hydroperoxide resistance protein
著者Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S.
登録日2018-08-06
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
6ED0
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BU of 6ed0 by Molmil
OhrA (Organic Hydroperoxide Resistance protein) mutant (C61S) in the "open conformation" from chromobacterium violaceum
分子名称: Organic hydroperoxide resistance protein, SULFATE ION
著者Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Netto, L.E.S.
登録日2018-08-08
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
6ECY
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BU of 6ecy by Molmil
OhrA (Organic Hydroperoxide Resistance protein) wild type from chromobacterium violaceum
分子名称: Organic hydroperoxide resistance protein
著者Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Netto, L.E.S.
登録日2018-08-08
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
6EB4
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OhrB (Organic Hydroperoxide Resistance protein) from Chromobacterium violaceum
分子名称: DI(HYDROXYETHYL)ETHER, Organic hydroperoxide resistance protein
著者Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S.
登録日2018-08-04
公開日2020-02-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
6FIZ
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BU of 6fiz by Molmil
Crystal Structure of CNG mimicking NaK-EAPP mutant (T67A) cocrystallized with K+
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, POTASSIUM ION, ...
著者Napolitano, L.M.R, De March, M, Steiner, R.A, Onesti, S.
登録日2018-01-19
公開日2019-03-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Crystal Structure of CNG mimicking NaK-EAPP mutant (T67A) cocrystallized with K+
To Be Published

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件を2024-07-17に公開中

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