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PDB: 437 件

2ERE
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Crystal Structure of a Leu3 DNA-binding domain complexed with a 15mer DNA duplex
分子名称: 5'-D(*TP*TP*GP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*CP*A)-3', Regulatory protein LEU3, ZINC ION
著者Fitzgerald, M.X, Marmorstein, R.
登録日2005-10-24
公開日2006-04-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of a Leu3-DNA complex: recognition of everted CGG half-sites by a Zn2Cys6 binuclear cluster protein.
Structure, 14, 2006
2H9T
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Crystal structure of human alpha-thrombin in complex with suramin
分子名称: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, PPACK active site thrombin inhibitor, Thrombin
著者Lima, L.M.T.R, Polikarpov, I, Monteiro, R.Q.
登録日2006-06-11
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and thermodynamic analysis of thrombin:suramin interaction in solution and crystal phases.
Biochim.Biophys.Acta, 1794, 2009
2ERG
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Crystal Structure of Leu3 DNA-binding domain with a single H50C mutation complexed with a 15mer DNA duplex
分子名称: 5'-D(*TP*TP*GP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*CP*A)-3', Regulatory protein LEU3, ZINC ION
著者Fitzgerald, M.X, Marmorstein, R.
登録日2005-10-24
公開日2006-04-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structure of a Leu3-DNA complex: recognition of everted CGG half-sites by a Zn2Cys6 binuclear cluster protein.
Structure, 14, 2006
1SZC
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Structural basis for nicotinamide cleavage and ADP-ribose transfer by NAD+-dependent Sir2 histone/protein deacetylases
分子名称: CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, CHLORIDE ION, GLYCEROL, ...
著者Zhao, K, Harshaw, R, Chai, X, Marmorstein, R.
登録日2004-04-05
公開日2004-06-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for nicotinamide cleavage and ADP-ribose transfer by NAD(+)-dependent Sir2 histone/protein deacetylases.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1QST
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CRYSTAL STRUCTURE OF TETRAHYMENA GCN5
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, TGCN5 HISTONE ACETYL TRANSFERASE
著者Rojas, J.R, Trievel, R.C, Zhou, J, Mo, Y, Li, X, Berger, S.L, David Allis, C, Marmorstein, R.
登録日1999-06-23
公開日1999-09-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of Tetrahymena GCN5 bound to coenzyme A and a histone H3 peptide.
Nature, 401, 1999
1HU8
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CRYSTAL STRUCTURE OF THE MOUSE P53 CORE DNA-BINDING DOMAIN AT 2.7A RESOLUTION
分子名称: CELLULAR TUMOR ANTIGEN P53, ZINC ION
著者Zhao, K, Chai, X, Johnston, K, Clements, A, Marmorstein, R.
登録日2001-01-04
公開日2001-07-04
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the mouse p53 core DNA-binding domain at 2.7 A resolution.
J.Biol.Chem., 276, 2001
1IHB
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CRYSTAL STRUCTURE OF P18-INK4C(INK6)
分子名称: CYCLIN-DEPENDENT KINASE 6 INHIBITOR
著者Ravichandran, V, Swaminathan, K, Marmorstein, R.
登録日1997-10-25
公開日1998-12-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the CDK4/6 inhibitory protein p18INK4c provides insights into ankyrin-like repeat structure/function and tumor-derived p16INK4 mutations.
Nat.Struct.Biol., 5, 1998
1B06
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SUPEROXIDE DISMUTASE FROM SULFOLOBUS ACIDOCALDARIUS
分子名称: FE (III) ION, PROTEIN (SUPEROXIDE DISMUTASE)
著者Knapp, S, Kardinahl, S, Niklas, H, Tibbelin, G, Schafer, G, Ladenstein, R.
登録日1998-11-16
公開日1999-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Refined crystal structure of a superoxide dismutase from the hyperthermophilic archaeon Sulfolobus acidocaldarius at 2.2 A resolution.
J.Mol.Biol., 285, 1999
1HXH
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COMAMONAS TESTOSTERONI 3BETA/17BETA HYDROXYSTEROID DEHYDROGENASE
分子名称: 3BETA/17BETA-HYDROXYSTEROID DEHYDROGENASE
著者Benach, J, Filling, C, Oppermann, U.C.T, Roversi, P, Bricogne, G, Berndt, K.D, Jornvall, H, Ladenstein, R.
登録日2001-01-15
公開日2002-12-25
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Structure of Bacterial 3beta/17beta-Hydroxysteroid Dehydrogenase at 1.2 A Resolution: A Model for Multiple Steroid Recognition
Biochemistry, 41, 2002
2PYA
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Ultra-high resolution structure of P. abyssi rubredoxin W4L/R5S/A44S
分子名称: FE (III) ION, Rubredoxin, SODIUM ION
著者Boenisch, H, Ladenstein, R.
登録日2007-05-16
公開日2008-04-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (0.86 Å)
主引用文献Ultrahigh-resolution study on Pyrococcus abyssi rubredoxin: II. Introduction of an O-H...Sgamma-Fe hydrogen bond increased the reduction potential by 65 mV.
J.Biol.Inorg.Chem., 12, 2007
2NYT
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BU of 2nyt by Molmil
The APOBEC2 Crystal Structure and Functional Implications for AID
分子名称: Probable C->U-editing enzyme APOBEC-2, ZINC ION
著者Prochnow, C, Bransteitter, R, Klein, M, Goodman, M, Chen, X.
登録日2006-11-21
公開日2007-01-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The APOBEC-2 crystal structure and functional implications for the deaminase AID.
Nature, 445, 2007
1QSN
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CRYSTAL STRUCTURE OF TETRAHYMENA GCN5 WITH BOUND COENZYME A AND HISTONE H3 PEPTIDE
分子名称: COENZYME A, HISTONE H3, TGCN5 HISTONE ACETYL TRANSFERASE
著者Rojas, J.R, Trievel, R.C, Zhou, J, Mo, Y, Li, X, Berger, S.L, David Allis, C, Marmorstein, R.
登録日1999-06-22
公開日1999-09-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Tetrahymena GCN5 bound to coenzyme A and a histone H3 peptide.
Nature, 401, 1999
1QMC
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C-terminal DNA-binding domain of HIV-1 integrase, NMR, 42 structures
分子名称: HIV-1 INTEGRASE
著者Eijkelenboom, A.P.A.M, Sprangers, R, Hard, K, Puras Lutzke, R.A, Plasterk, R.H.A, Boelens, R, Kaptein, R.
登録日1999-09-27
公開日1999-12-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Refined Solution Structure of the C-Terminal DNA-Binding Domain of Human Immunovirus-1 Integrase.
Proteins: Struct.,Funct., Genet., 36, 1999
1W6V
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BU of 1w6v by Molmil
Solution structure of the DUSP domain of hUSP15
分子名称: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15
著者De Jong, R.D, Ab, E, Diercks, T, Truffault, V, Daniels, M, Kaptein, R, Folkers, G.E.
登録日2004-08-24
公開日2006-01-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of the Human Ubiquitin-Specific Protease 15 Dusp Domain.
J.Biol.Chem., 281, 2006
2TMG
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BU of 2tmg by Molmil
THERMOTOGA MARITIMA GLUTAMATE DEHYDROGENASE MUTANT S128R, T158E, N117R, S160E
分子名称: PROTEIN (GLUTAMATE DEHYDROGENASE)
著者Knapp, S, Lebbink, J.H.G, van der Oost, J, de Vos, W.M, Rice, D, Ladenstein, R.
登録日1998-12-04
公開日1999-12-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Engineering activity and stability of Thermotoga maritima glutamate dehydrogenase. II: construction of a 16-residue ion-pair network at the subunit interface.
J.Mol.Biol., 289, 1999
1OSL
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Solution structure of a dimeric lactose DNA-binding domain complexed to a nonspecific DNA sequence
分子名称: 5'-D(*CP*GP*AP*TP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*AP*TP*CP*G)-3', Lactose operon repressor
著者Kalodimos, C.G, Bonvin, A.M.J.J, Boelens, R, Kaptein, R.
登録日2003-03-20
公開日2004-05-04
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Structure and flexibility adaptation in nonspecific and specific protein-DNA complexes.
Science, 305, 2004
1PCO
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SOLUTION STRUCTURE OF PORCINE PANCREATIC PROCOLIPASE AS DETERMINED FROM 1H HOMONUCLEAR TWO-AND THREE-DIMENSIONAL NMR
分子名称: HYDROXIDE ION, PORCINE PANCREATIC PROCOLIPASE B
著者Breg, J.N, Sarda, L, Cozzone, P.J, Rugani, N, Boelens, R, Kaptein, R.
登録日1994-06-08
公開日1994-12-20
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Solution structure of porcine pancreatic procolipase as determined from 1H homonuclear two-dimensional and three-dimensional NMR.
Eur.J.Biochem., 227, 1995
1PCN
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SOLUTION STRUCTURE OF PORCINE PANCREATIC PROCOLIPASE AS DETERMINED FROM 1H HOMONUCLEAR TWO-AND THREE-DIMENSIONAL NMR
分子名称: HYDROXIDE ION, PORCINE PANCREATIC PROCOLIPASE B
著者Breg, J.N, Sarda, L, Cozzone, P.J, Rugani, N, Boelens, R, Kaptein, R.
登録日1994-06-08
公開日1994-12-20
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Solution structure of porcine pancreatic procolipase as determined from 1H homonuclear two-dimensional and three-dimensional NMR.
Eur.J.Biochem., 227, 1995
1JM1
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Crystal structure of the soluble domain of the Rieske protein II (soxF) from Sulfolobus acidocaldarius
分子名称: FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION, Rieske iron-sulfur protein soxF
著者Boenisch, H, Schmidt, C.L, Schaefer, G, Ladenstein, R.
登録日2001-07-17
公開日2002-07-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献The structure of the soluble domain of an archaeal Rieske iron-sulfur protein at 1.1 A resolution.
J.Mol.Biol., 319, 2002
2X0J
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2.8 A RESOLUTION STRUCTURE OF MALATE DEHYDROGENASE FROM ARCHAEOGLOBUS FULGIDUS IN COMPLEX WITH ETHENO-NAD
分子名称: ETHENO-NAD, MALATE DEHYDROGENASE, SULFATE ION
著者Irimia, A, Madern, D, Zaccai, G, Vellieux, F.M, Karshikoff, A, Tibbelin, G, Ladenstein, R, Lien, T, Birkeland, N.K.
登録日2009-12-14
公開日2009-12-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.786 Å)
主引用文献The 2.9A Resolution Crystal Structure of Malate Dehydrogenase from Archaeoglobus Fulgidus: Mechanisms of Oligomerisation and Thermal Stabilisation.
J.Mol.Biol., 335, 2004
1PIS
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SOLUTION STRUCTURE OF PORCINE PANCREATIC PHOSPHOLIPASE A2
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Van Den Berg, B.D, Tessari, M, De Haas, G.H, Verheij, H.M, Boelens, R, Kaptein, R.
登録日1994-12-22
公開日1995-06-03
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of porcine pancreatic phospholipase A2.
EMBO J., 14, 1995
1PIR
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SOLUTION STRUCTURE OF PORCINE PANCREATIC PHOSPHOLIPASE A2
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Van Den Berg, B.D, Tessari, M, De Haas, G.H, Verheij, H.M, Boelens, R, Kaptein, R.
登録日1994-12-22
公開日1995-06-03
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of porcine pancreatic phospholipase A2.
EMBO J., 14, 1995
1POG
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SOLUTION STRUCTURE OF THE OCT-1 POU-HOMEO DOMAIN DETERMINED BY NMR AND RESTRAINED MOLECULAR DYNAMICS
分子名称: OCT-1 POU HOMEODOMAIN DNA-BINDING PROTEIN
著者Cox, M, Van Tilborg, P.J.A, De Laat, W, Boelens, R, Van Leeuwen, H.C, Van Der Vliet, P.C, Kaptein, R.
登録日1994-10-12
公開日1995-07-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the Oct-1 POU homeodomain determined by NMR and restrained molecular dynamics.
J.Biomol.NMR, 6, 1995
1BBX
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NON-SPECIFIC PROTEIN-DNA INTERACTIONS IN THE SSO7D-DNA COMPLEX, NMR, 1 STRUCTURE
分子名称: DNA (5'-D(*CP*TP*AP*GP*CP*GP*CP*GP*CP*TP*AP*G)-3'), DNA-BINDING PROTEIN 7D
著者Agback, P, Baumann, H, Knapp, S, Ladenstein, R, Hard, T.
登録日1998-04-24
公開日1998-10-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Architecture of Nonspecific Protein-DNA Interactions in the Sso7D-DNA Complex
Nat.Struct.Biol., 5, 1998
1O7A
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Human beta-Hexosaminidase B
分子名称: 1,2-ETHANEDIOL, 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Maier, T, Strater, N, Schuette, C, Klingenstein, R, Sandhoff, K, Saenger, W.
登録日2002-10-29
公開日2003-10-23
最終更新日2020-11-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The X-Ray Crystal Structure of Human Beta-Hexosaminidase B Provides New Insights Into Sandhoff Disease
J.Mol.Biol., 328, 2003

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