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PDB: 158 results

1WLJ
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BU of 1wlj by Molmil
human ISG20
Descriptor: ACETATE ION, MANGANESE (II) ION, URIDINE-5'-MONOPHOSPHATE, ...
Authors:Horio, T, Murai, M, Inoue, T, Hamasaki, T, Tanaka, T, Ohgi, T.
Deposit date:2004-06-28
Release date:2004-12-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human ISG20, an interferon-induced antiviral ribonuclease
Febs Lett., 577, 2004
1K1V
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BU of 1k1v by Molmil
Solution Structure of the DNA-Binding Domain of MafG
Descriptor: MafG
Authors:Kusunoki, H, Motohashi, H, Katsuoka, F, Morohashi, A, Yamamoto, M, Tanaka, T.
Deposit date:2001-09-25
Release date:2002-04-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the DNA-binding domain of MafG.
Nat.Struct.Biol., 9, 2002
1GLV
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BU of 1glv by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE GLUTATHIONE SYNTHETASE FROM ESCHERICHIA COLI B AT 2.0 ANGSTROMS RESOLUTION
Descriptor: GLUTATHIONE SYNTHASE
Authors:Yamaguchi, H, Kato, H, Tanaka, T, Katsube, Y.
Deposit date:1993-03-12
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Three-dimensional structure of the glutathione synthetase from Escherichia coli B at 2.0 A resolution.
J.Mol.Biol., 229, 1993
2YR2
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BU of 2yr2 by Molmil
Crystal Structure of the Hypothetical regulator from Sulfolobus tokodaii
Descriptor: 146aa long hypothetical transcriptional regulator, ZINC ION
Authors:Kumarevel, T.S, Tanaka, T, Nishio, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal Structure of the Hypothetical regulator from Sulfolobus tokodaii
To be Published
2ZCC
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BU of 2zcc by Molmil
Ubiquitin crystallized under high pressure
Descriptor: Ubiquitin, ZINC ION
Authors:Kitahara, R, Tanaka, T, Yamashita, M, Araya, K, Yokoyama, S, Akasaka, K, Taniguchi, Y, Kato, M.
Deposit date:2007-11-08
Release date:2007-11-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Ubiquitin crystallized under high pressure
to be published
2ZCB
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Crystal Structure of ubiquitin P37A/P38A
Descriptor: Ubiquitin, ZINC ION
Authors:Kitahara, R, Tanaka, T, Sakata, E, Yamaguchi, Y, Kato, K, Yokoyama, S.
Deposit date:2007-11-08
Release date:2007-11-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of ubiquitin P37A/P38A
To be published
3AA9
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BU of 3aa9 by Molmil
Crystal Structure Analysis of the Mutant CutA1 (E61V) from E. coli
Descriptor: Divalent-cation tolerance protein cutA
Authors:Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
Deposit date:2009-11-12
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
2ZZA
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BU of 2zza by Molmil
Moritella profunda Dihydrofolate reductase complex with NADP+ and Folate
Descriptor: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Hata, K, Tanaka, T, Murakami, C, Ohmae, E, Gekko, K, Shiro, Y, Akasaka, K.
Deposit date:2009-02-06
Release date:2010-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Moritella profunda Dihydrofolate reductase complex with NADP+ and Folate
To be Published
3AA8
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Crystal Structure Analysis of the Mutant CutA1 (S11V/E61V) from E. coli
Descriptor: Divalent-cation tolerance protein cutA
Authors:Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
Deposit date:2009-11-12
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
3AH6
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Remarkable improvement of the heat stability of CutA1 from E.coli by rational protein designing
Descriptor: Divalent-cation tolerance protein cutA
Authors:Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
Deposit date:2010-04-15
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
3A5T
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BU of 3a5t by Molmil
Crystal structure of MafG-DNA complex
Descriptor: 5'-D(*CP*TP*GP*AP*TP*GP*AP*GP*TP*CP*AP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*TP*GP*AP*CP*TP*CP*AP*TP*CP*AP*G)-3', MAGNESIUM ION, ...
Authors:Kurokawa, H, Motohashi, H, Sueno, S, Kimura, M, Takagawa, H, Kanno, Y, Yamamoto, M, Tanaka, T.
Deposit date:2009-08-11
Release date:2009-10-13
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis of Alternative DNA Recognition by Maf Transcription Factors
Mol.Cell.Biol., 29, 2009
2DI2
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BU of 2di2 by Molmil
NMR structure of the HIV-2 nucleocapsid protein
Descriptor: Nucleocapsid protein p7, ZINC ION
Authors:Matsui, T, Kodera, Y, Endoh, H, Miyauchi, E, Komatsu, H, Sato, K, Tanaka, T, Kohno, T, Maeda, T.
Deposit date:2006-03-27
Release date:2007-03-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:RNA Recognition Mechanism of the Minimal Active Domain of the Human Immunodeficiency Virus Type-2 Nucleocapsid Protein
J.Biochem.(Tokyo), 141, 2007
2DWN
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BU of 2dwn by Molmil
Crystal structure of the PriA protein complexed with oligonucleotides
Descriptor: DNA (5'-D(*A*G)-3'), Primosomal protein N'
Authors:Sasaki, K, Ose, T, Tanaka, T, Masai, H, Maenaka, K, Kohda, D.
Deposit date:2006-08-15
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
3U6Y
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BU of 3u6y by Molmil
Crystal structure of ALBA2-DNA complex
Descriptor: DNA (5'-D(*CP*CP*GP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*CP*G)-3'), DNA/RNA-binding protein Alba 2, ...
Authors:Kumarevel, T, Tanaka, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-10-13
Release date:2012-02-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of archaeal chromatin protein Alba2-double-stranded DNA complex from Aeropyrum pernix K1.
J.Biol.Chem., 287, 2012
2DWL
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BU of 2dwl by Molmil
Crystal structure of the PriA protein complexed with oligonucleotides
Descriptor: 5'-D(*AP*(DC))-3', Primosomal protein N
Authors:Sasaki, K, Ose, T, Tanaka, T, Masai, H, Maenaka, K, Kohda, D.
Deposit date:2006-08-15
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
2DWM
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BU of 2dwm by Molmil
Crystal structure of the PriA protein complexed with oligonucleotides
Descriptor: 5'-D(*AP*T)-3', Primosomal protein N
Authors:Sasaki, K, Ose, T, Tanaka, T, Masai, H, Maenaka, K, Kohda, D.
Deposit date:2006-08-15
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
1UDY
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BU of 1udy by Molmil
Medium-Chain Acyl-CoA Dehydrogenase with 3-Thiaoctanoyl-CoA
Descriptor: 3-THIAOCTANOYL-COENZYME A, Acyl-CoA dehydrogenase, medium-chain specific, ...
Authors:Satoh, A, Nakajima, Y, Miyahara, I, Hirotsu, K, Tanaka, T, Nishina, Y, Shiga, K, Tamaoki, H, Setoyama, C, Miura, R.
Deposit date:2003-05-07
Release date:2003-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the transition state analog of medium-chain acyl-CoA dehydrogenase. Crystallographic and molecular orbital studies on the charge-transfer complex of medium-chain acyl-CoA dehydrogenase with 3-thiaoctanoyl-CoA
J.BIOCHEM.(TOKYO), 134, 2003
3VNG
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BU of 3vng by Molmil
Crystal Structure of Keap1 in Complex with Synthetic Small Molecular based on a co-crystallization
Descriptor: 2-(3-((3-(5-(furan-2-yl)-1,3,4-oxadiazol-2-yl)ureido)methyl)phenoxy)acetic acid, Kelch-like ECH-associated protein 1
Authors:Kunishima, N, Tanaka, T, Satoh, M, Saburi, H.
Deposit date:2012-01-12
Release date:2013-01-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Keap1 in Complex with Synthetic Small Molecular based on a co-crystallization
To be Published
3VNH
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BU of 3vnh by Molmil
Crystal Structure of Keap1 Soaked with Synthetic Small Molecular
Descriptor: 2-(3-((3-(5-(furan-2-yl)-1,3,4-oxadiazol-2-yl)ureido)methyl)phenoxy)acetic acid, Kelch-like ECH-associated protein 1
Authors:Kunishima, N, Tanaka, T, Satoh, M, Saburi, H.
Deposit date:2012-01-12
Release date:2013-01-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Keap1 Soaked with Synthetic Small Molecular
To be Published
3W59
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BU of 3w59 by Molmil
Crystal structure of Galectin-1 in the lactose-unbound state(P212121)
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, Galectin-1, ...
Authors:Saburi, H, Tanaka, T, Kunishima, N.
Deposit date:2013-01-26
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Galectin-1 in the lactose-unbound state
To be Published
3WN8
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BU of 3wn8 by Molmil
Crystal Structure of Collagen-Model Peptide, (POG)3-PRG-(POG)4
Descriptor: collagen-like peptide
Authors:Okuyama, K, Haga, M, Noguchi, K, Tanaka, T.
Deposit date:2013-12-06
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Preferred side-chain conformation of arginine residues in a triple-helical structure.
Biopolymers, 101, 2014
3W58
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BU of 3w58 by Molmil
Crystal structure of Galectin-1 in the lactose-unbound state(P21)
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, Galectin-1, ...
Authors:Saburi, H, Tanaka, T, Kunishima, N.
Deposit date:2013-01-25
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of Galectin-1 in the lactose-unbound state
To be Published
2GZW
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BU of 2gzw by Molmil
Crystal structure of the E.coli CRP-cAMP complex
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
Authors:Kumarevel, T.S, Tanaka, T, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-12
Release date:2007-05-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of activated CRP protein from E coli
To be Published
2H09
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BU of 2h09 by Molmil
Crystal structure of diphtheria toxin repressor like protein from E. coli
Descriptor: Transcriptional regulator mntR
Authors:Kumarevel, T.S, Tanaka, T, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-14
Release date:2007-05-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the manganese transport regulatory protein from Escherichia coli.
Proteins, 2009
5D48
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BU of 5d48 by Molmil
Crystal Structure of FABP4 in complex with 3-{5-cyclopropyl-3-(3,5-dimethyl-1H-pyrazol-4-yl)-2-[3-(propan-2-yloxy) phenyl]-1H-indol-1-yl}propanoic acid
Descriptor: 3-{5-cyclopropyl-3-(3,5-dimethyl-1H-pyrazol-4-yl)-2-[3-(propan-2-yloxy)phenyl]-1H-indol-1-yl}propanoic acid, Fatty acid-binding protein, adipocyte, ...
Authors:Tagami, U, Takahashi, K, Igarashi, S, Ejima, C, Yoshida, T, Takeshita, S, Miyanaga, W, Sugiki, M, Tokumasu, M, Hatanaka, T, Kashiwagi, T, Ishikawa, K, Miyano, H, Mizukoshi, T.
Deposit date:2015-08-07
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Interaction Analysis of FABP4 Inhibitors by X-ray Crystallography and Fragment Molecular Orbital Analysis
Acs Med.Chem.Lett., 7, 2016

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