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PDB: 488 results

7PYO
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BU of 7pyo by Molmil
Structure of an LPMO (expressed in E.coli) at 2.31x10^5 Gy
Descriptor: ACETATE ION, Auxiliary activity 9, COPPER (II) ION, ...
Authors:Tandrup, T, Muderspach, S.J, Banerjee, S, Ipsen, J.O, Rollan, C.H, Norholm, M.H.H, Johansen, K.S, Lo Leggio, L.
Deposit date:2021-10-10
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
7PZ8
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BU of 7pz8 by Molmil
Structure of an LPMO at 3.12x10^6 Gy
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACRYLIC ACID, ...
Authors:Tandrup, T, Muderspach, S.J, Ipsen, J.O, Johansen, K.S, Lo Leggio, L.
Deposit date:2021-10-11
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
7PXN
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BU of 7pxn by Molmil
X-ray structure of LPMO at 6.65x10^6 Gy
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, COPPER (II) ION
Authors:Tandrup, T, Lo Leggio, L.
Deposit date:2021-10-08
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
7PZ5
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BU of 7pz5 by Molmil
Structure of an LPMO at 9.56x10^4 Gy
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACRYLIC ACID, ...
Authors:Tandrup, T, Muderspach, S.J, Ipsen, J.O, Johansen, K.S, Lo Leggio, L.
Deposit date:2021-10-11
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
7PYU
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BU of 7pyu by Molmil
Structure of an LPMO (expressed in E.coli) at 1.49x10^4 Gy
Descriptor: ACETATE ION, Auxiliary activity 9, CHLORIDE ION, ...
Authors:Tandrup, T, Muderspach, S.J, Banerjee, S, Ipsen, J.O, Rollan, C.H, Norholm, M.H.H, Johansen, K.S, Lo Leggio, L.
Deposit date:2021-10-11
Release date:2022-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
4Y65
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BU of 4y65 by Molmil
Crystal structure of E.coli CutA1 C16A/C39A/C79A mutation
Descriptor: Divalent-cation tolerance protein CutA
Authors:Tanaka, T, Matsuura, Y, Yutani, K.
Deposit date:2015-02-12
Release date:2015-04-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of E.coli CutA1 C16A/C39A/C79A mutation
To Be Published
4Y6I
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BU of 4y6i by Molmil
Crystal structure of E.coli CutA1 E61V/C16A/C39A/C79A mutation
Descriptor: Divalent-cation tolerance protein CutA
Authors:Tanaka, T, Matsuura, Y, Yutani, K.
Deposit date:2015-02-13
Release date:2015-09-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of E.coli CutA1 E61V/C16A/C39A/C79A mutation
To Be Published
6ZTA
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BU of 6zta by Molmil
X-ray structure of mutated arabinofuranosidase
Descriptor: Alpha-L-arabinofuranosidase
Authors:Tandrup, T, Lo Leggio, L, Zhao, J, Bissaro, B, Barbe, S, Andre, I, Dumon, C, O'Donohue, M.J, Faure, R.
Deposit date:2020-07-17
Release date:2021-02-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Probing the determinants of the transglycosylation/hydrolysis partition in a retaining alpha-l-arabinofuranosidase.
N Biotechnol, 62, 2021
6ZT8
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BU of 6zt8 by Molmil
X-ray structure of mutated arabinofuranosidase
Descriptor: Alpha-L-arabinofuranosidase, CHLORIDE ION, PENTAETHYLENE GLYCOL, ...
Authors:Tandrup, T, Lo Leggio, L, Zhao, J, Bissaro, B, Barbe, S, Andre, I, Dumon, C, O'Donohue, M.J, Faure, R.
Deposit date:2020-07-17
Release date:2021-02-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Probing the determinants of the transglycosylation/hydrolysis partition in a retaining alpha-l-arabinofuranosidase.
N Biotechnol, 62, 2021
1IKU
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BU of 1iku by Molmil
myristoylated recoverin in the calcium-free state, NMR, 22 structures
Descriptor: MYRISTIC ACID, RECOVERIN
Authors:Tanaka, T, Ames, J.B, Harvey, T.S, Stryer, L, Ikura, M.
Deposit date:1996-01-18
Release date:1996-07-11
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Sequestration of the membrane-targeting myristoyl group of recoverin in the calcium-free state.
Nature, 376, 1995
5NKW
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BU of 5nkw by Molmil
X-ray crystal structure of an AA9 LPMO
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ...
Authors:Tandrup, T, Frandsen, K.E.H, Poulsen, J.-C.N, Lo Leggio, L.
Deposit date:2017-04-03
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates.
Nat Commun, 8, 2017
7Y4P
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BU of 7y4p by Molmil
Human Plexin A1, extracellular domains 1-4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1
Authors:Tanaka, T, Neyazaki, M, Nogi, T.
Deposit date:2022-06-15
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Hybrid in vitro/in silico analysis of low-affinity protein-protein interactions that regulate signal transduction by Sema6D.
Protein Sci., 31, 2022
6R9J
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BU of 6r9j by Molmil
Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module in complex with A7 RNA
Descriptor: A7 RNA, PAN2-PAN3 deadenylation complex catalytic subunit PAN2
Authors:Tang, T.T.L, Stowell, J.A.W, Hill, C.H, Passmore, L.A.
Deposit date:2019-04-03
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.326 Å)
Cite:The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
Nat.Struct.Mol.Biol., 26, 2019
6R9P
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BU of 6r9p by Molmil
Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module in complex with AAUUAA RNA
Descriptor: AAUUAA RNA, PAN2-PAN3 deadenylation complex catalytic subunit PAN2
Authors:Tang, T.T.L, Stowell, J.A.W, Hill, C.H, Passmore, L.A.
Deposit date:2019-04-03
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
Nat.Struct.Mol.Biol., 26, 2019
6R9O
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BU of 6r9o by Molmil
Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module in complex with AAGGA RNA
Descriptor: AAGGA RNA, PAN2-PAN3 deadenylation complex catalytic subunit PAN2
Authors:Tang, T.T.L, Stowell, J.A.W, Hill, C.H, Passmore, L.A.
Deposit date:2019-04-03
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.319 Å)
Cite:The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
Nat.Struct.Mol.Biol., 26, 2019
8CQ3
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BU of 8cq3 by Molmil
Bifunctional chorismate mutase/cyclohexadienyl dehydratase from Aequoribacter fuscus
Descriptor: ACETATE ION, CHLORIDE ION, chorismate mutase
Authors:Khatanbaatar, T, Cordara, G, Krengel, U.
Deposit date:2023-03-03
Release date:2023-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Novel exported fusion enzymes with chorismate mutase and cyclohexadienyl dehydratase activity: Shikimate pathway enzymes teamed up in no man's land.
J.Biol.Chem., 299, 2023
8CQ4
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BU of 8cq4 by Molmil
Bifunctional cyclohexadienyl dehydratase/chorismate mutase from Janthinobacterium sp. HH01
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bifunctional cyclohexadienyl dehydratase/chorismate mutase from Janthinobacterium sp. HH01
Authors:Khatanbaatar, T, Cordara, G, Krengel, U.
Deposit date:2023-03-03
Release date:2023-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Novel exported fusion enzymes with chorismate mutase and cyclohexadienyl dehydratase activity: Shikimate pathway enzymes teamed up in no man's land.
J.Biol.Chem., 299, 2023
8CQ6
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BU of 8cq6 by Molmil
Bifunctional cyclohexadienyl dehydratase/chorismate mutase from Duganella sacchari
Descriptor: CHLORIDE ION, SODIUM ION, chorismate mutase
Authors:Khatanbaatar, T, Cordara, G, Krengel, U.
Deposit date:2023-03-03
Release date:2023-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Novel exported fusion enzymes with chorismate mutase and cyclohexadienyl dehydratase activity: Shikimate pathway enzymes teamed up in no man's land.
J.Biol.Chem., 299, 2023
6YDE
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BU of 6yde by Molmil
X-ray structure of LPMO
Descriptor: COPPER (II) ION, LPMO lytic polysaccharide monooxygenase, SULFATE ION, ...
Authors:Tandrup, T, Tryfona, T, Frandsen, K.E.H, Johansen, K.S, Dupree, P, Lo Leggio, L.
Deposit date:2020-03-20
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Oligosaccharide Binding and Thermostability of Two Related AA9 Lytic Polysaccharide Monooxygenases.
Biochemistry, 59, 2020
6YDC
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BU of 6ydc by Molmil
X-ray structure of LPMO
Descriptor: COPPER (II) ION, LPMO lytic polysaccharide monooxygenase, SULFATE ION, ...
Authors:Tandrup, T, Tryfona, T, Frandsen, K.E.H, Johansen, K.S, Dupree, P, Lo Leggio, L.
Deposit date:2020-03-20
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Oligosaccharide Binding and Thermostability of Two Related AA9 Lytic Polysaccharide Monooxygenases.
Biochemistry, 59, 2020
6R9I
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BU of 6r9i by Molmil
Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module
Descriptor: PAN2-PAN3 deadenylation complex catalytic subunit PAN2
Authors:Tang, T.T.L, Stowell, J.A.W, Hill, C.H, Passmore, L.A.
Deposit date:2019-04-03
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
Nat.Struct.Mol.Biol., 26, 2019
6R9M
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BU of 6r9m by Molmil
Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module in complex with AAGGAA RNA
Descriptor: AAGGAA RNA, PAN2-PAN3 deadenylation complex catalytic subunit PAN2
Authors:Tang, T.T.L, Stowell, J.A.W, Hill, C.H, Passmore, L.A.
Deposit date:2019-04-03
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.329 Å)
Cite:The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
Nat.Struct.Mol.Biol., 26, 2019
6R9Q
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BU of 6r9q by Molmil
Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module in complex with AACCAA RNA
Descriptor: AACCAA, PAN2-PAN3 deadenylation complex catalytic subunit PAN2
Authors:Tang, T.T.L, Stowell, J.A.W, Hill, C.H, Passmore, L.A.
Deposit date:2019-04-03
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.079 Å)
Cite:The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
Nat.Struct.Mol.Biol., 26, 2019
6YDD
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BU of 6ydd by Molmil
X-ray structure of LPMO.
Descriptor: COPPER (II) ION, LPMO lytic polysaccharide monooxygenase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Tandrup, T, Tryfona, T, Frandsen, K.E.H, Johansen, K.S, Dupree, P, Lo Leggio, L.
Deposit date:2020-03-20
Release date:2020-09-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Oligosaccharide Binding and Thermostability of Two Related AA9 Lytic Polysaccharide Monooxygenases.
Biochemistry, 59, 2020
6YDG
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BU of 6ydg by Molmil
X-ray structure of LPMO
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ...
Authors:Tandrup, T, Tryfona, T, Frandsen, K.E.H, Johansen, K.S, Dupree, P, Lo Leggio, L.
Deposit date:2020-03-20
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Oligosaccharide Binding and Thermostability of Two Related AA9 Lytic Polysaccharide Monooxygenases.
Biochemistry, 59, 2020

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PDB entries from 2024-07-31

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