Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1033 results

8X3H
DownloadVisualize
BU of 8x3h by Molmil
Crystal structure of iron-bound recombinant ovotransferrin N-lobe at 0.93 angstrom resolution
Descriptor: CARBONATE ION, FE (III) ION, GLYCEROL, ...
Authors:Toyoda, M, Mikami, B, Mizutani, K.
Deposit date:2023-11-13
Release date:2023-12-13
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Crystal structure of iron-bound ovotransferrin N-lobe at atomic resolution
To Be Published
4TSN
DownloadVisualize
BU of 4tsn by Molmil
Crystal structure of FraC with POC bound (crystal form II)
Descriptor: ACETATE ION, Fragaceatoxin C, GLYCEROL, ...
Authors:Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
Deposit date:2014-06-19
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSQ
DownloadVisualize
BU of 4tsq by Molmil
Crystal structure of FraC with DHPC bound (crystal form III)
Descriptor: 1,2-dihexanoyl-sn-glycero-3-phosphocholine, CHLORIDE ION, Fragaceatoxin C, ...
Authors:Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
Deposit date:2014-06-19
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
5SWD
DownloadVisualize
BU of 5swd by Molmil
Structure of the adenine riboswitch aptamer domain in an intermediate-bound state
Descriptor: ADENINE, MAGNESIUM ION, Vibrio vulnificus strain 93U204 chromosome II, ...
Authors:Stagno, J.R, Wang, Y.-X, Liu, Y, Bhandari, Y.R, Conrad, C.E, Nelson, G, Li, C, Wendel, D.R, White, T.A, Barty, A, Tuckey, R.A, Zatsepin, N.A, Grant, T.D, Fromme, P, Tan, K, Ji, X, Spence, J.C.H.
Deposit date:2016-08-08
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
5SWE
DownloadVisualize
BU of 5swe by Molmil
Ligand-bound structure of adenine riboswitch aptamer domain converted in crystal from its ligand-free state using ligand mixing serial femtosecond crystallography
Descriptor: ADENINE, Vibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domain
Authors:Stagno, J.R, Wang, Y.-X, Liu, Y, Bhandari, Y.R, Conrad, C.E, Nelson, G, Li, C, Wendel, D.R, White, T.A, Barty, A, Tuckey, R.A, Zatsepin, N.A, Grant, T.D, Fromme, P, Tan, K, Ji, X, Spence, J.C.H.
Deposit date:2016-08-08
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
5UJ1
DownloadVisualize
BU of 5uj1 by Molmil
Crystal structure of Mycobacterium tuberculosis Topoisomerase I at 2.15A resolution limit
Descriptor: DNA topoisomerase 1, SULFATE ION
Authors:Cao, N, Tan, K, Tse-Dinh, Y.C.
Deposit date:2017-01-16
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.153 Å)
Cite:Investigating mycobacterial topoisomerase I mechanism from the analysis of metal and DNA substrate interactions at the active site.
Nucleic Acids Res., 46, 2018
5UJY
DownloadVisualize
BU of 5ujy by Molmil
The structure of Mycobacterium tuberculosis topoisomerase I from the 2nd crystal form
Descriptor: DNA topoisomerase 1
Authors:Cao, N, Tan, K, Tse-Dinh, Y.C.
Deposit date:2017-01-19
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Investigating mycobacterial topoisomerase I mechanism from the analysis of metal and DNA substrate interactions at the active site.
Nucleic Acids Res., 46, 2018
6MIJ
DownloadVisualize
BU of 6mij by Molmil
Crystal structure of EF-Tu from Acinetobacter baumannii in complex with Mg2+ and GDP
Descriptor: Elongation factor Tu, FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-19
Release date:2018-10-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.955 Å)
Cite:To be published
To Be Published
4J7J
DownloadVisualize
BU of 4j7j by Molmil
The crystal structure of a secreted protein EsxB (Mutant G53A) from Bacillus anthracis str. Sterne
Descriptor: GLYCEROL, secreted protein EsxB
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-02-13
Release date:2013-03-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.458 Å)
Cite:The crystal structure of a secreted protein EsxB (Mutant, G53A) from Bacillus anthracis str. Sterne
To be Published
4JDU
DownloadVisualize
BU of 4jdu by Molmil
The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines.
Descriptor: Aerotolerance-related membrane protein, CALCIUM ION, FORMIC ACID
Authors:Fan, Y, Tan, K, Bigelow, L, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-02-25
Release date:2013-03-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines.
To be Published
4UX2
DownloadVisualize
BU of 4ux2 by Molmil
Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. MgF)
Descriptor: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
Authors:Abe, K, Tani, K, Fujiyoshi, Y.
Deposit date:2014-08-18
Release date:2014-09-17
Last modified:2014-11-12
Method:ELECTRON CRYSTALLOGRAPHY (7 Å)
Cite:Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating.
J.Biol.Chem., 289, 2014
4J7K
DownloadVisualize
BU of 4j7k by Molmil
The crystal structure of a secreted protein EsxB (Mutant E54Q) from Bacillus anthracis str. Sterne
Descriptor: secreted protein EsxB
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-02-13
Release date:2013-03-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:The crystal structure of a secreted protein EsxB (Mutant E54Q) from Bacillus anthracis str. Sterne
To be Published
4KT7
DownloadVisualize
BU of 4kt7 by Molmil
The crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase from Anaerococcus prevotii DSM 20548
Descriptor: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, CHLORIDE ION, SODIUM ION
Authors:Borek, D, Tan, K, Stols, L, Eschenfeidt, W.H, Otwinoski, Z, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-20
Release date:2013-06-05
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:The crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase from Anaerococcus prevotii DSM 20548
To be Published
3FY6
DownloadVisualize
BU of 3fy6 by Molmil
Structure from the mobile metagenome of V. Cholerae. Integron cassette protein VCH_CASS3
Descriptor: Integron cassette protein
Authors:Deshpande, C.N, Sureshan, V, Harrop, S.J, Boucher, Y, Xu, X, Cui, H, Edwards, A, Savchenko, A, Joachimiak, A, Tan, K, Stokes, H.W, Curmi, P.M.G, Mabbutt, B.C, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-01-21
Release date:2009-02-10
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Integron gene cassettes: a repository of novel protein folds with distinct interaction sites.
Plos One, 8, 2013
4I1D
DownloadVisualize
BU of 4i1d by Molmil
The crystal structure of an ABC transporter substrate-binding protein from Bradyrhizobium japonicum USDA 110
Descriptor: ABC transporter substrate-binding protein, ACETATE ION, D-MALATE, ...
Authors:Fan, Y, Tan, K, Mack, J, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-11-20
Release date:2012-12-05
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
4I6V
DownloadVisualize
BU of 4i6v by Molmil
The crystal structure of an amidohydrolase 2 from Planctomyces limnophilus DSM 3776
Descriptor: ACETATE ION, Amidohydrolase 2, GLYCEROL, ...
Authors:Fan, Y, Tan, K, Wu, R, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-11-30
Release date:2013-02-06
Method:X-RAY DIFFRACTION (2.137 Å)
Cite:The crystal structure of an amidohydrolase 2 from Planctomyces limnophilus DSM 3776
To be Published
4J11
DownloadVisualize
BU of 4j11 by Molmil
The crystal structure of a secreted protein ESXB (wild-type, in P21 space group) from Bacillus anthracis str. sterne
Descriptor: SECRETED PROTEIN ESXB
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-01-31
Release date:2013-02-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:The Crystal Structure of a Secreted Protein Esxb (Wild-Type, in P21 Space Group) from Bacillus Anthracis Str. Sterne
To be Published
4J10
DownloadVisualize
BU of 4j10 by Molmil
The crystal structure of a secreted protein ESXB (SeMet-labeled) from Bacillus anthracis str. Sterne
Descriptor: FORMIC ACID, SECRETED PROTEIN ESXB
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-01-31
Release date:2013-02-13
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:The Crystal Structure of a Secreted Protein Esxb (Semet-Labeled) from Bacillus Anthracis Str. Sterne
To be Published
4J41
DownloadVisualize
BU of 4j41 by Molmil
The crystal structure of a secreted protein EsxB (Mutant P67A) from Bacillus anthracis str. Sterne
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-02-06
Release date:2013-02-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.522 Å)
Cite:The crystal structure of a secreted protein EsxB (Mutant P67A) from Bacillus anthracis str. Sterne
To be Published
4IYI
DownloadVisualize
BU of 4iyi by Molmil
The crystal structure of a secreted protein EsxB (wild-type, C-term. His-tagged) from Bacillus anthracis str. Sterne
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, SULFATE ION, ...
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-01-28
Release date:2013-02-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.083 Å)
Cite:The crystal structure of a secreted protein EsxB (wild-type, C-term. His-tagged) from Bacillus anthracis str. Sterne
To be Published
4J42
DownloadVisualize
BU of 4j42 by Molmil
The crystal structure of a secreted protein EsxB (Mutant Y65F) from Bacillus anthracis str. Sterne
Descriptor: CITRATE ANION, FORMIC ACID, secreted protein EsxB
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-02-06
Release date:2013-02-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:The crystal structure of a secreted protein EsxB (Mutant Y65F) from Bacillus anthracis str. Sterne
To be Published
4IYH
DownloadVisualize
BU of 4iyh by Molmil
The crystal structure of a secreted protein EsxB (SeMet-labeled, C-term. His-Tagged) from Bacillus anthracis str. Sterne
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, FORMIC ACID, ...
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-01-28
Release date:2013-02-20
Method:X-RAY DIFFRACTION (1.881 Å)
Cite:The crystal structure of a secreted protein EsxB (SeMet-labeled, C-term. His-Tagged) from Bacillus anthracis str. Sterne
To be Published
2DZV
DownloadVisualize
BU of 2dzv by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D146A) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZT
DownloadVisualize
BU of 2dzt by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D110A) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZU
DownloadVisualize
BU of 2dzu by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D110N) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published

223166

数据于2024-07-31公开中

PDB statisticsPDBj update infoContact PDBjnumon