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PDB: 1089 件

1WN1
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Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
分子名称: COBALT (II) ION, dipeptidase
著者Jeyakanthan, J, Taka, J, Kitaguchi, Y, Shiro, Y, Yokoyama, S, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-26
公開日2005-08-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
To be Published
4AOE
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Biomphalaria glabrata Acetylcholine-binding protein type 2 (BgAChBP2)
分子名称: ACETYLCHOLINE-BINDING PROTEIN TYPE 2
著者Saur, M, Moeller, V, Kapetanopoulos, K, Braukmann, S, Gebauer, W, Tenzer, S, Markl, J.
登録日2012-03-26
公開日2012-08-29
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Acetylcholine-Binding Protein in the Hemolymph of the Planorbid Snail Biomphalaria Glabrata is a Pentagonal Dodecahedron (60 Subunits)
Plos One, 7, 2012
2XZB
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Pig Gastric H,K-ATPase with bound BeF and SCH28080
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Fujiyoshi, Y.
登録日2010-11-24
公開日2011-01-26
最終更新日2020-09-16
実験手法ELECTRON CRYSTALLOGRAPHY (7 Å)
主引用文献Conformational Rearrangement of Gastric H(+),K(+)- ATPase Induced by an Acid Suppressant.
Nat.Commun., 2, 2011
1RY0
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Structure of prostaglandin F synthase with prostaglandin D2
分子名称: Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROSTAGLANDIN D2
著者Komoto, J, Yamada, T, Watanabe, K, Takusagawa, F.
登録日2003-12-19
公開日2004-11-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Crystal structure of human prostaglandin F synthase (AKR1C3).
Biochemistry, 43, 2004
1RY8
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Prostaglandin F synthase complexed with NADPH and rutin
分子名称: Aldo-keto reductase family 1 member C3, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, RUTIN
著者Komoto, J, Yamada, T, Watanabe, K, Takusagawa, F.
登録日2003-12-19
公開日2004-11-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Crystal structure of human prostaglandin F synthase (AKR1C3).
Biochemistry, 43, 2004
1UI8
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Site-directed mutagenesis of His592 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
登録日2003-07-15
公開日2004-04-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
4AOD
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Biomphalaria glabrata Acetylcholine-binding protein type 1 (BgAChBP1)
分子名称: ACETYLCHOLINE-BINDING PROTEIN TYPE 1
著者Saur, M, Moeller, V, Kapetanopoulos, K, Braukmann, S, Gebauer, W, Tenzer, S, Markl, J.
登録日2012-03-26
公開日2012-08-29
最終更新日2018-10-03
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Acetylcholine-Binding Protein in the Hemolymph of the Planorbid Snail Biomphalaria Glabrata is a Pentagonal Dodecahedron (60 Subunits)
Plos One, 7, 2012
1MH6
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Solution Structure of the Transposon Tn5-encoding Bleomycin-binding Protein, BLMT
分子名称: BLEOMYCIN RESISTANCE PROTEIN
著者Kumagai, T, Ohtani, K, Tsuboi, Y, Koike, T, Sugiyama, M.
登録日2002-08-19
公開日2003-02-19
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the transposon Tn5-encoding bleomycin-binding protein complexed with an activated bleomycin analogue.
To be published
1V4P
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Crystal structure of Alanyl-tRNA Synthetase from Pyrococcus horikoshii OT3
分子名称: ZINC ION, alanyl-tRNA synthetase
著者Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-14
公開日2004-11-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of alanyl-tRNA synthetase editing-domain homolog (PH0574) from a hyperthermophile, Pyrococcus horikoshii OT3 at 1.45 A resolution
Proteins, 62, 2006
1G3C
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BOVINE BETA-TRYPSIN BOUND TO PARA-AMIDINO SCHIFF BASE IRON(III) CHELATE
分子名称: 2-(4-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1G3E
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BOVINE BETA-TRYPSIN BOUND TO PARA-AMIDINO SCHIFF-BASE COPPER (II) CHELATE
分子名称: 2-(4-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1XRS
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Crystal structure of Lysine 5,6-Aminomutase in complex with PLP, cobalamin, and 5'-deoxyadenosine
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, D-lysine 5,6-aminomutase alpha subunit, ...
著者Berkovitch, F, Behshad, E, Tang, K.H, Enns, E.A, Frey, P.A, Drennan, C.L.
登録日2004-10-15
公開日2004-11-09
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A locking mechanism preventing radical damage in the absence of substrate, as revealed by the x-ray structure of lysine 5,6-aminomutase.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1V2X
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TrmH
分子名称: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (Gm18) methyltransferase
著者Nureki, O, Watanabe, K, Fukai, S, Ishii, R, Endo, Y, Hori, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-17
公開日2004-05-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Deep Knot Structure for Construction of Active Site and Cofactor Binding Site of tRNA Modification Enzyme
STRUCTURE, 12, 2004
1G3D
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BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASE COPPER (II) CHELATE
分子名称: 2-(5-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1G3B
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BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASE MAGNESIUM(II) CHELATE
分子名称: 2-(5-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1VC2
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Crystal structure of Glyceraldehyde 3-Phosphate Dehydrogenase from Thermus thermophilus HB8
分子名称: Glyceraldehyde 3-Phosphate Dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-04
公開日2004-03-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the Glyceraldehyde 3-Phosphate Dehydrogenase from Thermus thermophilus HB8
To be Published
1V9K
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The crystal structure of the catalytic domain of pseudouridine synthase RluC from Escherichia coli
分子名称: Ribosomal large subunit pseudouridine synthase C, SULFATE ION
著者Machida, Y, Mizutani, K, Unzai, S, Park, S.-Y, Tame, J.R.H.
登録日2004-01-26
公開日2004-05-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the catalytic domains of pseudouridine synthases RluC and RluD from Escherichia coli
Biochemistry, 43, 2004
2YN9
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Cryo-EM structure of gastric H+,K+-ATPase with bound rubidium
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Friedrich, T, Fujiyoshi, Y.
登録日2012-10-13
公開日2012-11-07
最終更新日2014-07-16
実験手法ELECTRON CRYSTALLOGRAPHY (8 Å)
主引用文献Cryo-Em Structure of Gastric H+,K+-ATPase with a Single Occupied Cation-Binding Site.
Proc.Natl.Acad.Sci.USA, 109, 2012
1WXR
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Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from pathogenic Escherichia coli
分子名称: haemoglobin protease
著者Otto, B.R, Sijbrandi, R, Luirink, J, Oudega, B, Heddle, J.G, Mizutani, K, Park, S.-Y, Tame, J.R.H.
登録日2005-01-31
公開日2005-03-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of heme binding protein, an autotransporter hemoglobin protease from pathogenic escherichia coli
J.Biol.Chem., 280, 2005
1UI7
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Site-directed mutagenesis of His433 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
登録日2003-07-15
公開日2004-04-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
1VD6
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Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
分子名称: GLYCEROL, Glycerophosphoryl Diester Phosphodiesterase
著者Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-18
公開日2005-04-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
To be Published
2YVC
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Crystal structure of the Radixin FERM domain complexed with the NEP cytoplasmic tail
分子名称: Neprilysin, Radixin
著者Terawaki, S, Kitano, K, Hakoshima, T.
登録日2007-04-11
公開日2007-04-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for type II membrane protein binding by ERM proteins revealed by the radixin-neutral endopeptidase 24.11 (NEP) complex
J.Biol.Chem., 282, 2007
6IZP
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Solution structure of the complex of naphthyridine carbamate dimer and an RNA with UGGAA-UGGAA pentad
分子名称: 3-[3-[(7-methyl-1,8-naphthyridin-2-yl)carbamoyloxy]propylamino]propyl ~{N}-(7-methyl-1,8-naphthyridin-2-yl)carbamate, RNA (29-MER)
著者Nagano, K, Shibata, T, Nakatani, K, Kawai, G.
登録日2018-12-20
公開日2019-12-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Small molecule targeting r(UGGAA)n disrupts RNA foci and alleviates disease phenotype in Drosophila model
Nat Commun, 12, 2021
2Z9W
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Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal
分子名称: 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, Aspartate aminotransferase, GLYCEROL, ...
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2ZFH
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Crystal structure of putative CutA1 from Homo sapiens at 2.05A resolution
分子名称: CutA
著者Bagautdinov, B, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-01-07
公開日2008-01-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of putative CutA1 from Homo sapiens determined at 2.05 A resolution.
Acta Crystallogr.,Sect.F, 64, 2008

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