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PDB: 15 results

3BM3
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BU of 3bm3 by Molmil
Restriction endonuclease PspGI-substrate DNA complex
Descriptor: CITRIC ACID, DNA (5'-D(*CP*AP*TP*CP*CP*AP*GP*GP*TP*AP*C)-3'), DNA (5'-D(*GP*GP*TP*AP*CP*CP*TP*GP*GP*AP*T)-3'), ...
Authors:Szczepanowski, R.H, Carpenter, M, Czapinska, H, Tamulaitis, G, Siksnys, V, Bhagwat, A, Bochtler, M.
Deposit date:2007-12-12
Release date:2008-09-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A direct crystallographic demonstration that Type II restriction endonuclease PspGI flips nucleotides
To be Published
3IMB
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BU of 3imb by Molmil
Alternative binding mode of restriction endonuclease BcnI to cognate DNA
Descriptor: 5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3', R.BcnI
Authors:Sokolowska, M, Kaus-Drobek, M, Czapinska, H, Tamulaitis, G, Szczepanowski, R.H, Siksnys, V, Bochtler, M.
Deposit date:2009-08-10
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:How BcnI and MvaI distinguish W from S
To be Published
6FJW
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BU of 6fjw by Molmil
Streptococcus thermophilus Cas6
Descriptor: CALCIUM ION, Cas6 protein
Authors:Tamulaitiene, G, Mogila, I, Siksnys, V, Tamulaitis, G.
Deposit date:2018-01-23
Release date:2019-02-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Streptococcus thermophilus Cas6
To be published
9EYJ
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BU of 9eyj by Molmil
Cryo-EM structure of SAVED-Lon protease CCaCalpL filament bound to cA4
Descriptor: SMODS-associated and fused to various effectors domain-containing protein, cA4
Authors:Tamulaitiene, G, Sasnauskas, G, Smalakyte, D, Tamulaitis, G.
Deposit date:2024-04-09
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Cryo-EM structure of SAVED-Lon protease CCaCalpL filament bound to cA4
To Be Published
9EYI
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BU of 9eyi by Molmil
Cryo-EM structure of SAVED-Lon protease CCaCalpL filament bound to A4p
Descriptor: A4p (5'-R(*AP*AP*AP*AP)-3'), SMODS-associated and fused to various effectors domain-containing protein
Authors:Tamulaitiene, G, Sasnauskas, G, Smalakyte, D, Tamulaitis, G.
Deposit date:2024-04-09
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Cryo-EM structure of SAVED-Lon protease CCaCalpL filament bound to A4p
To Be Published
9EYK
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BU of 9eyk by Molmil
Cryo-EM structure of SAVED-Lon protease CCaCalpL filament bound to A4>p
Descriptor: A4>p (5'-R(*AP*AP*AP*(A23))-3'), SMODS-associated and fused to various effectors domain-containing protein
Authors:Tamulaitiene, G, Sasnauskas, G, Smalakyte, D, Tamulaitis, G.
Deposit date:2024-04-09
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Cryo-EM structure of SAVED-Lon protease CCaCalpL filament bound to A4>p
To Be Published
8PHJ
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BU of 8phj by Molmil
cA4-bound Cami1 in complex with 70S ribosome
Descriptor: 16S rRNA, 23S rRNA (2862-MER), 5S rRNA, ...
Authors:Tamulaitiene, G, Mogila, I, Sasnauskas, G, Tamulaitis, G.
Deposit date:2023-06-20
Release date:2023-12-13
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling.
Science, 382, 2023
8PHB
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BU of 8phb by Molmil
Crystal structure of apo Cami1
Descriptor: CRISPR-associated protein, APE2256 family
Authors:Tamulaitiene, G, Tamulaitis, G, Mogila, I, Keda, K.
Deposit date:2023-06-19
Release date:2023-12-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling.
Science, 382, 2023
2FQZ
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BU of 2fqz by Molmil
Metal-depleted Ecl18kI in complex with uncleaved DNA
Descriptor: DNA STRAND 1, DNA STRAND 2, R.Ecl18kI
Authors:Bochtler, M, Szczepanowski, R.H, Tamulaitis, G, Grazulis, S, Czapinska, H, Manakova, E, Siksnys, V.
Deposit date:2006-01-18
Release date:2006-06-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nucleotide flips determine the specificity of the Ecl18kI restriction endonuclease
Embo J., 25, 2006
2GB7
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BU of 2gb7 by Molmil
Metal-depleted Ecl18kI in complex with uncleaved, modified DNA
Descriptor: DNA STRAND 1, DNA STRAND 2, R.Ecl18kI
Authors:Bochtler, M, Szczepanowski, R.H, Tamulaitis, G, Grazulis, S, Czapinska, H, Manakova, E, Siksnys, V.
Deposit date:2006-03-10
Release date:2006-06-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Nucleotide flips determine the specificity of the Ecl18kI restriction endonuclease
Embo J., 25, 2006
2ODH
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BU of 2odh by Molmil
Restriction Endonuclease BCNI in the Absence of DNA
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, R.BcnI
Authors:Sokolowska, M, Kaus-Drobek, M, Czapinska, H, Tamulaitis, G, Szczepanowski, R.H, Urbanke, K, Siksnys, V, Bochtler, M.
Deposit date:2006-12-22
Release date:2007-03-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA.
J.Mol.Biol., 369, 2007
2ODI
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BU of 2odi by Molmil
Restriction Endonuclease BCNI-Cognate DNA Substrate Complex
Descriptor: 5'-D(*AP*AP*CP*CP*CP*GP*GP*AP*GP*AP*C)-3', 5'-D(*CP*TP*CP*CP*GP*GP*GP*TP*TP*GP*T)-3', CALCIUM ION, ...
Authors:Sokolowska, M, Kaus-Drobek, M, Czapinska, H, Tamulaitis, G, Szczepanowski, R.H, Urbanke, C, Siksnys, V, Bochtler, M.
Deposit date:2006-12-22
Release date:2007-03-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA.
J.Mol.Biol., 369, 2007
2OA9
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BU of 2oa9 by Molmil
Restriction endonuclease MvaI in the absence of DNA
Descriptor: ACETATE ION, CADMIUM ION, CHLORIDE ION, ...
Authors:Kaus-Drobek, M, Czapinska, H, Sokolowska, M, Tamulaitis, G, Szczepanowski, R.H, Urbanke, K, Siksnys, V, Bochtler, M.
Deposit date:2006-12-15
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically.
Nucleic Acids Res., 35, 2007
2OAA
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BU of 2oaa by Molmil
Restriction endonuclease MvaI-cognate DNA substrate complex
Descriptor: 5'-D(*CP*AP*TP*CP*CP*AP*GP*GP*TP*AP*C)-3', 5'-D(*GP*GP*TP*AP*CP*CP*TP*GP*GP*AP*T)-3', CALCIUM ION, ...
Authors:Kaus-Drobek, M, Czapinska, H, Sokolowska, M, Tamulaitis, G, Szczepanowski, R.H, Urbanke, K, Siksnys, V, Bochtler, M.
Deposit date:2006-12-15
Release date:2007-02-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically.
Nucleic Acids Res., 35, 2007
2Q10
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BU of 2q10 by Molmil
RESTRICTION ENDONUCLEASE BcnI (WILD TYPE)-COGNATE DNA SUBSTRATE COMPLEX
Descriptor: CALCIUM ION, CHLORIDE ION, DNA (5'-D(*AP*AP*CP*CP*CP*GP*GP*AP*GP*AP*C)-3'), ...
Authors:Sokolowska, M, Kaus-Drobek, M, Czapinska, H, Tamulaitis, G, Szczepanowski, R.H, Urbanke, C, Siksnys, V, Bochtler, M.
Deposit date:2007-05-23
Release date:2007-06-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Monomeric Restriction Endonuclease BcnI in the Apo Form and in an Asymmetric Complex with Target DNA.
J.Mol.Biol., 369, 2007

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PDB entries from 2024-11-20

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