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PDB: 47 件

7ZOB
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Metagenomic cytidine deaminase Cdd
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Metagenomic cytidine deaminase Cdd, SULFATE ION, ...
著者Tamulaitiene, G, Urbeliene, N, Meskys, R.
登録日2022-04-25
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Cytidine deaminases catalyze the conversion of N ( S , O ) 4 -substituted pyrimidine nucleosides.
Sci Adv, 9, 2023
2IXS
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Structure of SdaI restriction endonuclease
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SDAI RESTRICTION ENDONUCLEASE, ...
著者Tamulaitiene, G, Jakubauskas, A, Urbanke, C, Huber, R, Grazulis, S, Siksnys, V.
登録日2006-07-11
公開日2006-09-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Crystal Structure of the Rare-Cutting Restriction Enzyme Sdai Reveals Unexpected Domain Architecture
Structure, 14, 2006
4QDL
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Crystal structure of E.coli Cas1-Cas2 complex
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2
著者Tamulaitiene, G, Sinkunas, T, Silanskas, A, Gasiunas, G, Grazulis, S, Siksnys, V.
登録日2014-05-14
公開日2014-05-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of E.coli Cas1-Cas2 complex
To be Published
4ZSF
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Crystal structure of pre-specific restriction endonuclease BsaWI-DNA complex
分子名称: BsaWI endonuclease, CALCIUM ION, DNA, ...
著者Tamulaitiene, G, Rutkauskas, M, Grazulis, S, Siksnys, V.
登録日2015-05-13
公開日2015-10-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Functional significance of protein assemblies predicted by the crystal structure of the restriction endonuclease BsaWI.
Nucleic Acids Res., 43, 2015
5O63
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Crystal structure of UbaLAI restriction endonuclease B3 domain domain (mutant L24M L53M L95M) with cognate DNA
分子名称: DNA (5'-D(*C*G*C*C*A*G*G*G*C*)-3'), DNA (5'-D(*G*C*C*C*T*G*G*C*G*)-3'), Restriction endonuclease UbaLAI
著者Tamulaitiene, G, Sasnauskas, G, Siksnys, V.
登録日2017-06-05
公開日2017-08-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献UbaLAI is a monomeric Type IIE restriction enzyme.
Nucleic Acids Res., 45, 2017
4RCT
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Crystal structure of R-protein of NgoAVII restriction endonuclease
分子名称: Restriction endonuclease R.NgoVII
著者Tamulaitiene, G, Silanskas, A, Grazulis, S, Zaremba, M, Siksnys, V.
登録日2014-09-17
公開日2014-12-24
最終更新日2014-12-31
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
Nucleic Acids Res., 42, 2014
4RD5
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Crystal structure of R.NgoAVII restriction endonuclease B3 domain with cognate DNA
分子名称: DNA (5'-D(*CP*CP*CP*TP*AP*AP*GP*CP*GP*GP*CP*AP*AP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*AP*TP*TP*GP*CP*CP*GP*CP*TP*TP*AP*GP*G)-3'), Restriction endonuclease R.NgoVII
著者Tamulaitiene, G, Silanskas, A, Grazulis, S, Zaremba, M, Siksnys, V.
登録日2014-09-18
公開日2014-12-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
Nucleic Acids Res., 42, 2014
4RDM
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Crystal structure of R.NgoAVII restriction endonuclease B3 domain with cognate DNA
分子名称: DNA (5'-D(*CP*CP*TP*AP*AP*GP*CP*GP*GP*CP*AP*AP*TP*CP*C)-3)', DNA (5'-D(*GP*GP*GP*AP*TP*TP*GP*CP*CP*GP*CP*TP*TP*AP*G)-3)', Restriction endonuclease R.NgoVII, ...
著者Tamulaitiene, G, Silanskas, A, Grazulis, S, Zaremba, M, Siksnys, V.
登録日2014-09-19
公開日2014-12-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
Nucleic Acids Res., 42, 2014
7BB5
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Crystal structure of anti-CRISPR protein AcrIF9
分子名称: AcrIF9
著者Tamulaitiene, G, Sinkunas, T, Kupcinskaite, E.
登録日2020-12-17
公開日2021-11-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Disarming of type I-F CRISPR-Cas surveillance complex by anti-CRISPR proteins AcrIF6 and AcrIF9.
Sci Rep, 12, 2022
8PHJ
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cA4-bound Cami1 in complex with 70S ribosome
分子名称: 16S rRNA, 23S rRNA (2862-MER), 5S rRNA, ...
著者Tamulaitiene, G, Mogila, I, Sasnauskas, G, Tamulaitis, G.
登録日2023-06-20
公開日2023-12-13
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling.
Science, 382, 2023
8PHB
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Crystal structure of apo Cami1
分子名称: CRISPR-associated protein, APE2256 family
著者Tamulaitiene, G, Tamulaitis, G, Mogila, I, Keda, K.
登録日2023-06-19
公開日2023-12-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling.
Science, 382, 2023
8BTO
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Helical structure of BcThsA in complex with 1''-3'gcADPR
分子名称: (2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione, NAD(+) hydrolase ThsA, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Tamulaitiene, G, Sasnauskas, G, Sabonis, D.
登録日2022-11-29
公開日2024-02-21
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Activation of Thoeris antiviral system via SIR2 effector filament assembly.
Nature, 627, 2024
8BTP
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Helical structure of BcThsA in complex with 1''-3'gc(etheno)ADPR
分子名称: (1S,3S,4R,5R,7R,15R,16S,17R)-5-imidazo[2,1-f]purin-3-yl-10,12-bis(oxidanyl)-10,12-bis(oxidanylidene)-2,6,9,11,13,18-hexaoxa-10$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{3,7}]octadecane-4,16,17-triol, ETHENO-NAD, NAD(+) hydrolase ThsA
著者Tamulaitiene, G, Sasnauskas, G, Sabonis, D.
登録日2022-11-29
公開日2024-02-21
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Activation of Thoeris antiviral system via SIR2 effector filament assembly.
Nature, 627, 2024
8BTN
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Crystal structure of BcThsB
分子名称: TIR domain-containing protein
著者Tamulaitiene, G, Sabonis, D.
登録日2022-11-29
公開日2024-02-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Activation of Thoeris antiviral system via SIR2 effector filament assembly.
Nature, 627, 2024
5DWB
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Crystal structure of specific restriction endonuclease AgeI-DNA complex
分子名称: DNA (5'-D(*TP*TP*CP*GP*AP*CP*CP*GP*GP*TP*CP*GP*A*)-3'), Type-2 restriction enzyme AgeI
著者Tamulaitiene, G, Jovaisaite, V, Grazulis, S, Siksnys, V.
登録日2015-09-22
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA.
Nucleic Acids Res., 45, 2017
5DWA
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Crystal structure of pre-specific restriction endonuclease AgeI-DNA complex
分子名称: DNA (5'-D(*TP*CP*GP*AP*CP*CP*GP*GP*TP*CP*G*)-3'), Type-2 restriction enzyme AgeI
著者Tamulaitiene, G, Jovaisaite, V, Grazulis, S, Siksnys, V.
登録日2015-09-22
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA.
Nucleic Acids Res., 45, 2017
5DWC
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Crystal structure of restriction endonuclease AgeI
分子名称: Type-2 restriction enzyme AgeI
著者Tamulaitiene, G, Ramonaite, I, Grazulis, S, Siksnys, V.
登録日2015-09-22
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA.
Nucleic Acids Res., 45, 2017
7AER
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Rebuilt and re-refined PDB entry 5yep: tri-AMPylated Shewanella oneidensis HEPN toxin in complex with MNT antitoxin
分子名称: ADENOSINE MONOPHOSPHATE, Toxin-antitoxin system antidote Mnt family, Toxin-antitoxin system toxin HepN family
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-18
公開日2020-12-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE9
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Crystal structure of mono-AMPylated HEPN(R46E) toxin in complex with MNT antitoxin
分子名称: 2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE, HEPN toxin, MNT ANTITOXIN
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-17
公開日2020-12-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE8
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Crystal structure of HEPN(R102A) toxin
分子名称: ACETATE ION, HEPN toxin
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-17
公開日2020-12-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE2
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Crystal structure of HEPN(H107A-Y109F) toxin in complex with MNT antitoxin
分子名称: HEPN toxin, MNT ANTITOXIN
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-17
公開日2020-12-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE6
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Crystal structure of di-AMPylated HEPN(R102A) toxin
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, HEPN toxin
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-17
公開日2020-12-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
6FJW
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Streptococcus thermophilus Cas6
分子名称: CALCIUM ION, Cas6 protein
著者Tamulaitiene, G, Mogila, I, Siksnys, V, Tamulaitis, G.
登録日2018-01-23
公開日2019-02-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Streptococcus thermophilus Cas6
To be published
6EKO
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Crystal structure of Type IIP restriction endonuclease PfoI with cognate DNA
分子名称: CALCIUM ION, DNA (5'-D(*CP*GP*CP*TP*CP*CP*CP*GP*GP*AP*GP*CP*GP*T)-3'), Restriction endonuclease PfoI
著者Tamulaitiene, G, Manakova, E, Jovaisaite, V, Grazulis, S, Siksnys, V.
登録日2017-09-26
公開日2018-10-10
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (2.284 Å)
主引用文献Unique mechanism of target recognition by PfoI restriction endonuclease of the CCGG-family.
Nucleic Acids Res., 47, 2019
6EK1
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Crystal structure of Type IIP restriction endonuclease PfoI
分子名称: 1,2-ETHANEDIOL, restriction endonuclease PfoI
著者Tamulaitiene, G, Manakova, E, Jovaisaite, V, Grazulis, S, Siksnys, V.
登録日2017-09-25
公開日2018-10-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Unique mechanism of target recognition by PfoI restriction endonuclease of the CCGG-family.
Nucleic Acids Res., 47, 2019

 

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