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PDB: 135 件

6QSG
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Crystal structure of the hybrid bioinorganic complex of Pizza6S and Keggin (STA)
分子名称: Keggin (STA), Pizza6S
著者Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D.
登録日2019-02-20
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.
Chem.Commun.(Camb.), 56, 2020
5Z01
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Native Escherichia coli L,D-carboxypeptidase A (LdcA)
分子名称: MAGNESIUM ION, Murein tetrapeptide carboxypeptidase
著者Meyer, K, Tame, J.R.H.
登録日2017-12-18
公開日2018-04-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.
Biochem. Biophys. Res. Commun., 499, 2018
6QSD
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Crystal structure of Pizza6S
分子名称: Pizza6S, SULFATE ION
著者Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D.
登録日2019-02-20
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.
Chem.Commun.(Camb.), 56, 2020
6QSH
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Crystal structure of the hybrid bioinorganic complex of Pizza6S linked by the 1:2 Ce-substituted Keggin
分子名称: 1:2 Ce-substituted Keggin, Pizza6S
著者Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D.
登録日2019-02-20
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.
Chem.Commun.(Camb.), 56, 2020
5Z03
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Mutant (S106A) Escherichia coli L,D-carboxypeptidase A (LdcA)
分子名称: Murein tetrapeptide carboxypeptidase
著者Meyer, K, Tame, J.R.H.
登録日2017-12-18
公開日2018-04-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.755 Å)
主引用文献The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.
Biochem. Biophys. Res. Commun., 499, 2018
8Y6C
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Norovirus GII.10 P domain and 2'-FL (powder)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'FL (powder), ...
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-02
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Norovirus GII.10 P domain and 2'-FL (powder)
To Be Published
8Y6D
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Norovirus GII.10 P domain and 2'-FL (tablet)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'-FL (tablet), ...
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-02
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Norovirus GII.10 P domain and 2'-FL (tablet)
To Be Published
8Y5V
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GII.4 Sydney PD and 2'-FL
分子名称: 1,2-ETHANEDIOL, GII.4 Sydney PD in complex with 2'-FL (powder), alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-01
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献GII.4 Sydney PD and 2'-FL
To Be Published
7FCI
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human NTCP in complex with YN69083 Fab
分子名称: Fab Heavy chain, Fab Light chain, Sodium/bile acid cotransporter
著者Park, J.H, Iwamoto, M, Yun, J.H, Uchikubo-Kamo, T, Son, D, Jin, Z, Yoshida, H, Ohki, M, Ishimoto, N, Mizutani, K, Oshima, M, Muramatsu, M, Wakita, T, Shirouzu, M, Liu, K, Uemura, T, Nomura, N, Iwata, S, Watashi, K, Tame, J.R.H, Nishizawa, T, Lee, W, Park, S.Y.
登録日2021-07-14
公開日2022-05-25
最終更新日2022-07-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into the HBV receptor and bile acid transporter NTCP.
Nature, 606, 2022
1UAN
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Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
分子名称: hypothetical protein TT1542
著者Handa, N, Terada, T, Tame, J.R.H, Park, S.-Y, Kinoshita, K, Ota, M, Nakamura, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-03-12
公開日2003-08-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
PROTEIN SCI., 12, 2003
1B5H
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OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-DIAMINOPROPANOIC ACID-LYSINE
分子名称: LYS-DPP-LYS PEPTIDE, OLIGO-PEPTIDE BINDING PROTEIN, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-13
公開日1998-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B6H
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OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NORVALYL-LYSINE
分子名称: LYS-NVA-LYS PEPTIDE, Periplasmic oligopeptide-binding protein, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-13
公開日1998-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B4H
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OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-DIAMINOBUTYRIC ACID-LYSINE
分子名称: LYS-DAB-LYS PEPTIDE, PERIPLASMIC OLIGO-PEPTIDE BINDING PROTEIN, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-11
公開日1998-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B7H
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OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NORLEUCYL-LYSINE
分子名称: LYS-NLE-LYS PEPTIDE, Periplasmic oligopeptide-binding protein, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-16
公開日1998-11-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B3H
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BU of 1b3h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-CYCLOHEXYLALANYL-LYSINE
分子名称: LYS-ALC-LYS PEPTIDE, PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-16
公開日1998-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B0H
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BU of 1b0h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NAPTHYLALANYL-LYSINE
分子名称: LYS-ALN-LYS PEPTIDE, PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-10
公開日1998-11-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
3VUS
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BU of 3vus by Molmil
Escherichia coli PgaB N-terminal domain
分子名称: ACETATE ION, MERCURY (II) ION, Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase, ...
著者Nishiyama, T, Noguchi, H, Yoshida, H, Park, S.-Y, Tame, J.R.H.
登録日2012-07-05
公開日2012-11-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The structure of the deacetylase domain of Escherichia coli PgaB, an enzyme required for biofilm formation: a circularly permuted member of the carbohydrate esterase 4 family
Acta Crystallogr.,Sect.D, 69, 2013
3X1W
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BU of 3x1w by Molmil
Ras-related protein Rap1B with GDP
分子名称: CADMIUM ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Noguchi, H, Ikegami, T, Akashi, S, Park, S.Y, Tame, J.R.H, Unzai, S.
登録日2014-12-02
公開日2015-06-03
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
3X1Y
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Ras-related protein Rap1B(L9V) with GppNHp
分子名称: CADMIUM ION, GLYCEROL, MAGNESIUM ION, ...
著者Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S.
登録日2014-12-02
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.168 Å)
主引用文献The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
3X1X
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Ras-related protein Rap1B with GppNHp
分子名称: CADMIUM ION, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S.
登録日2014-12-02
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
2ZP9
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The Nature of the TRAP:Anti-TRAP complex
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ...
著者Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H.
登録日2008-07-08
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZD0
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Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP)
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB
著者Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G.
登録日2007-11-15
公開日2008-04-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008
2ZP8
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The Nature of the TRAP:Anti-TRAP complex
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ...
著者Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H.
登録日2008-07-08
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
3X1Z
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Ras-related protein Rap1B(T65A) with GppNHp
分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S.
登録日2014-12-02
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
2ZCZ
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Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP)
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB
著者Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G.
登録日2007-11-15
公開日2008-04-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008

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