2ZCZ
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![BU of 2zcz by Molmil](/molmil-images/mine/2zcz) | Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP) | Descriptor: | TRYPTOPHAN, Transcription attenuation protein mtrB | Authors: | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | Deposit date: | 2007-11-15 | Release date: | 2008-04-29 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP. Protein Sci., 17, 2008
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3VUS
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![BU of 3vus by Molmil](/molmil-images/mine/3vus) | Escherichia coli PgaB N-terminal domain | Descriptor: | ACETATE ION, MERCURY (II) ION, Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase, ... | Authors: | Nishiyama, T, Noguchi, H, Yoshida, H, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2012-07-05 | Release date: | 2012-11-14 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | The structure of the deacetylase domain of Escherichia coli PgaB, an enzyme required for biofilm formation: a circularly permuted member of the carbohydrate esterase 4 family Acta Crystallogr.,Sect.D, 69, 2013
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2ZP8
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![BU of 2zp8 by Molmil](/molmil-images/mine/2zp8) | The Nature of the TRAP:Anti-TRAP complex | Descriptor: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | Authors: | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | Deposit date: | 2008-07-08 | Release date: | 2009-02-03 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | The nature of the TRAP-Anti-TRAP complex. Proc.Natl.Acad.Sci.USA, 106, 2009
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2ZP9
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![BU of 2zp9 by Molmil](/molmil-images/mine/2zp9) | The Nature of the TRAP:Anti-TRAP complex | Descriptor: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | Authors: | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | Deposit date: | 2008-07-08 | Release date: | 2009-02-03 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | The nature of the TRAP-Anti-TRAP complex. Proc.Natl.Acad.Sci.USA, 106, 2009
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2ZD0
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![BU of 2zd0 by Molmil](/molmil-images/mine/2zd0) | Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP) | Descriptor: | TRYPTOPHAN, Transcription attenuation protein mtrB | Authors: | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | Deposit date: | 2007-11-15 | Release date: | 2008-04-29 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP. Protein Sci., 17, 2008
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3AEH
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![BU of 3aeh by Molmil](/molmil-images/mine/3aeh) | |
3X1W
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![BU of 3x1w by Molmil](/molmil-images/mine/3x1w) | Ras-related protein Rap1B with GDP | Descriptor: | CADMIUM ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Noguchi, H, Ikegami, T, Akashi, S, Park, S.Y, Tame, J.R.H, Unzai, S. | Deposit date: | 2014-12-02 | Release date: | 2015-06-03 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | The structure and conformational switching of Rap1B Biochem.Biophys.Res.Commun., 462, 2015
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3X1Y
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![BU of 3x1y by Molmil](/molmil-images/mine/3x1y) | Ras-related protein Rap1B(L9V) with GppNHp | Descriptor: | CADMIUM ION, GLYCEROL, MAGNESIUM ION, ... | Authors: | Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S. | Deposit date: | 2014-12-02 | Release date: | 2015-06-03 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.168 Å) | Cite: | The structure and conformational switching of Rap1B Biochem.Biophys.Res.Commun., 462, 2015
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1IV4
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![BU of 1iv4 by Molmil](/molmil-images/mine/1iv4) | Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form Substrate) | Descriptor: | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, CYTIDINE-5'-MONOPHOSPHATE, MAGNESIUM ION | Authors: | Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-03-11 | Release date: | 2002-09-11 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
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1IV1
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![BU of 1iv1 by Molmil](/molmil-images/mine/1iv1) | Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase | Descriptor: | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | Authors: | Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-03-11 | Release date: | 2002-09-11 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
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1GCV
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![BU of 1gcv by Molmil](/molmil-images/mine/1gcv) | DEOXY FORM HEMOGLOBIN FROM MUSTELUS GRISEUS | Descriptor: | HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Naoi, Y, Chong, K.T, Yoshimatsu, K, Miyazaki, G, Tame, J.R.H, Park, S.Y, Adachi, S.I, Morimoto, H. | Deposit date: | 2000-08-08 | Release date: | 2000-08-31 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | The functional similarity and structural diversity of human and cartilaginous fish hemoglobins. J.Mol.Biol., 307, 2001
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1GCW
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![BU of 1gcw by Molmil](/molmil-images/mine/1gcw) | CO form hemoglobin from mustelus griseus | Descriptor: | CARBON MONOXIDE, PROTEIN (HEMOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE | Authors: | Naoi, Y, Chong, K.T, Yoshimatsu, K, Miyazaki, G, Tame, J.R.H, Park, S.Y, Adachi, S.I, Morimoto, H. | Deposit date: | 2000-08-08 | Release date: | 2000-09-06 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | The functional similarity and structural diversity of human and cartilaginous fish hemoglobins. J.Mol.Biol., 307, 2001
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1IV3
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![BU of 1iv3 by Molmil](/molmil-images/mine/1iv3) | Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form MG atoms) | Descriptor: | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, MAGNESIUM ION | Authors: | Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-03-11 | Release date: | 2002-09-11 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.52 Å) | Cite: | Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
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1IV2
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![BU of 1iv2 by Molmil](/molmil-images/mine/1iv2) | Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form CDP) | Descriptor: | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION | Authors: | Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-03-11 | Release date: | 2002-09-11 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
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3VRF
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![BU of 3vrf by Molmil](/molmil-images/mine/3vrf) | The crystal structure of hemoglobin from woolly mammoth in the carbonmonoxy forms | Descriptor: | CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta/delta hybrid, ... | Authors: | Noguchi, H, Campbell, K.L, Ho, C, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2012-04-09 | Release date: | 2012-11-07 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structures of haemoglobin from woolly mammoth in liganded and unliganded states. Acta Crystallogr.,Sect.D, 68, 2012
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3VRE
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![BU of 3vre by Molmil](/molmil-images/mine/3vre) | The crystal structure of hemoglobin from woolly mammoth in the deoxy form | Descriptor: | Hemoglobin subunit alpha, Hemoglobin subunit beta/delta hybrid, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Noguchi, H, Campbell, K.L, Ho, C, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2012-04-09 | Release date: | 2012-11-07 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structures of haemoglobin from woolly mammoth in liganded and unliganded states. Acta Crystallogr.,Sect.D, 68, 2012
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3VRG
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![BU of 3vrg by Molmil](/molmil-images/mine/3vrg) | The crystal structure of hemoglobin from woolly mammoth in the met form | Descriptor: | Hemoglobin subunit alpha, Hemoglobin subunit beta/delta hybrid, PROTOPORPHYRIN IX CONTAINING FE, ... | Authors: | Noguchi, H, Campbell, K.L, Ho, C, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2012-04-09 | Release date: | 2012-11-07 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structures of haemoglobin from woolly mammoth in liganded and unliganded states. Acta Crystallogr.,Sect.D, 68, 2012
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3WWF
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![BU of 3wwf by Molmil](/molmil-images/mine/3wwf) | Crystal structure of the computationally designed Pizza2-SR protein | Descriptor: | pizza2sr-pb protein | Authors: | Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H. | Deposit date: | 2014-06-17 | Release date: | 2014-10-08 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.601 Å) | Cite: | Computational design of a self-assembling symmetrical beta-propeller protein. Proc.Natl.Acad.Sci.USA, 111, 2014
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3WWB
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![BU of 3wwb by Molmil](/molmil-images/mine/3wwb) | Crystal structure of the computationally designed Pizza2-SR protein | Descriptor: | Pizza2-SR protein | Authors: | Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H. | Deposit date: | 2014-06-17 | Release date: | 2014-10-08 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Computational design of a self-assembling symmetrical beta-propeller protein. Proc.Natl.Acad.Sci.USA, 111, 2014
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3WMV
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![BU of 3wmv by Molmil](/molmil-images/mine/3wmv) | The structure of an anti-cancer lectin mytilec with ligand from the mussel Mytilus galloprovincialis | Descriptor: | 2-acetamido-2-deoxy-alpha-D-galactopyranose, Lectin | Authors: | Terada, D, Kawai, F, Noguchi, H, Unzai, S, Park, S.-Y, Ozeki, Y, Tame, J.R.H. | Deposit date: | 2013-11-27 | Release date: | 2014-12-03 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.05 Å) | Cite: | Crystal structure of MytiLec, a galactose-binding lectin from the mussel Mytilus galloprovincialis with cytotoxicity against certain cancer cell types Sci Rep, 6, 2016
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3WWA
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![BU of 3wwa by Molmil](/molmil-images/mine/3wwa) | Crystal structure of the computationally designed Pizza7 protein after heat treatment | Descriptor: | ISOPROPYL ALCOHOL, Pizza7H protein | Authors: | Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H. | Deposit date: | 2014-06-17 | Release date: | 2014-10-08 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.988 Å) | Cite: | Computational design of a self-assembling symmetrical beta-propeller protein. Proc.Natl.Acad.Sci.USA, 111, 2014
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3WW9
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![BU of 3ww9 by Molmil](/molmil-images/mine/3ww9) | Crystal structure of the computationally designed Pizza6 protein | Descriptor: | GLYCEROL, SULFATE ION, pizza6 protein | Authors: | Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H. | Deposit date: | 2014-06-17 | Release date: | 2014-10-08 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.33 Å) | Cite: | Computational design of a self-assembling symmetrical beta-propeller protein. Proc.Natl.Acad.Sci.USA, 111, 2014
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3WW7
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![BU of 3ww7 by Molmil](/molmil-images/mine/3ww7) | Crystal structure of the computationally designed Pizza2 protein | Descriptor: | GLYCEROL, Pizza2 protein | Authors: | Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H. | Deposit date: | 2014-06-17 | Release date: | 2014-10-08 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.697 Å) | Cite: | Computational design of a self-assembling symmetrical beta-propeller protein. Proc.Natl.Acad.Sci.USA, 111, 2014
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3WMU
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![BU of 3wmu by Molmil](/molmil-images/mine/3wmu) | The structure of an anti-cancer lectin mytilec apo-form from the mussel Mytilus galloprovincialis | Descriptor: | GLYCEROL, Lectin | Authors: | Terada, D, Kawai, F, Noguchi, H, Unzai, S, Park, S.-Y, Ozeki, Y, Tame, J.R.H. | Deposit date: | 2013-11-27 | Release date: | 2014-12-03 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.1 Å) | Cite: | Crystal structure of MytiLec, a galactose-binding lectin from the mussel Mytilus galloprovincialis with cytotoxicity against certain cancer cell types Sci Rep, 6, 2016
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3WW8
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![BU of 3ww8 by Molmil](/molmil-images/mine/3ww8) | Crystal structure of the computationally designed Pizza3 protein | Descriptor: | GLYCEROL, Pizza3 protein, SULFATE ION | Authors: | Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H. | Deposit date: | 2014-06-17 | Release date: | 2014-10-08 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.402 Å) | Cite: | Computational design of a self-assembling symmetrical beta-propeller protein. Proc.Natl.Acad.Sci.USA, 111, 2014
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