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PDB: 98 件

5DHD
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BU of 5dhd by Molmil
Crystal structure of ChBD2 from Thermococcus kodakarensis KOD1
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Chitinase, SULFATE ION
著者Hibi, M, Niwa, S, Takeda, K, Miki, K.
登録日2015-08-30
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Crystal structures of chitin binding domains of chitinase from Thermococcus kodakarensis KOD1
Febs Lett., 590, 2016
3O0T
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BU of 3o0t by Molmil
Crystal structure of human phosphoglycerate mutase family member 5 (PGAM5) in complex with phosphate
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, Serine/threonine-protein phosphatase PGAM5, ...
著者Chaikuad, A, Alfano, I, Picaud, S, Filippakopoulos, P, Barr, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Takeda, K, Ichijo, H, Knapp, S, Structural Genomics Consortium (SGC)
登録日2010-07-20
公開日2010-10-06
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of PGAM5 Provide Insight into Active Site Plasticity and Multimeric Assembly.
Structure, 25, 2017
5ZUI
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BU of 5zui by Molmil
Crystal Structure of HSP104 from Chaetomium thermophilum
分子名称: ADENOSINE-5'-DIPHOSPHATE, Heat Shock Protein 104, SULFATE ION
著者Hanazono, Y, Inoue, Y, Noguchi, K, Yohda, M, Shinohara, K, Takeda, K, Miki, K.
登録日2018-05-07
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Split conformation of Chaetomium thermophilum Hsp104 disaggregase.
Structure, 2021
3MXO
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BU of 3mxo by Molmil
Crystal structure oh human phosphoglycerate mutase family member 5 (PGAM5)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Chaikuad, A, Alfano, I, Picaud, S, Filippakopoulos, P, Barr, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Takeda, K, Ichijo, H, Knapp, S, Structural Genomics Consortium (SGC)
登録日2010-05-07
公開日2010-09-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structures of PGAM5 Provide Insight into Active Site Plasticity and Multimeric Assembly.
Structure, 25, 2017
5B3P
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BU of 5b3p by Molmil
Nqo5 of the trypsin-resistant fragment (1-134) in P212121 form
分子名称: CALCIUM ION, NADH-quinone oxidoreductase subunit 5
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-09
公開日2016-07-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.652 Å)
主引用文献Characterization of the Nqo5 subunit of bacterial complex I in the isolated state
Febs Open Bio, 6, 2016
5B3Q
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BU of 5b3q by Molmil
Nqo5 of the trypsin-resistant fragment (1-134) in P63 form
分子名称: NADH-quinone oxidoreductase subunit 5
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-09
公開日2016-07-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Characterization of the Nqo5 subunit of bacterial complex I in the isolated state
Febs Open Bio, 6, 2016
5B3Y
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BU of 5b3y by Molmil
Crystal structure of hPin1 WW domain (5-23) fused with maltose-binding protein
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-17
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3W
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BU of 5b3w by Molmil
Crystal structure of hPin1 WW domain (5-15) fused with maltose-binding protein in C2221 form
分子名称: CITRIC ACID, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-17
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3X
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BU of 5b3x by Molmil
Crystal structure of hPin1 WW domain (5-15) fused with maltose-binding protein in P41212 form
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-17
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5BMY
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BU of 5bmy by Molmil
Crystal structure of hPin1 WW domain (5-21) fused with maltose-binding protein
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2015-05-25
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3Z
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BU of 5b3z by Molmil
Crystal structure of hPin1 WW domain (5-39) fused with maltose-binding protein
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2016-03-17
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5WQR
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BU of 5wqr by Molmil
High resolution structure of high-potential iron-sulfur protein in the reduced state
分子名称: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
著者Ohno, H, Takeda, K, Niwa, S, Tsujinaka, T, Hanazono, Y, Hirano, Y, Miki, K.
登録日2016-11-28
公開日2017-06-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.8 Å)
主引用文献Crystallographic characterization of the high-potential iron-sulfur protein in the oxidized state at 0.8 angstrom resolution
PLoS ONE, 12, 2017
5WQQ
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BU of 5wqq by Molmil
High resolution structure of high-potential iron-sulfur protein in the oxidized state
分子名称: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
著者Ohno, H, Takeda, K, Niwa, S, Tsujinaka, T, Hanazono, Y, Hirano, Y, Miki, K.
登録日2016-11-28
公開日2017-06-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.8 Å)
主引用文献Crystallographic characterization of the high-potential iron-sulfur protein in the oxidized state at 0.8 angstrom resolution
PLoS ONE, 12, 2017
5ZIL
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BU of 5zil by Molmil
Crystal structure of bacteriorhodopsin at 1.29 A resolution
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, RETINAL
著者Hasegawa, N, Jonotsuka, H, Miki, K, Takeda, K.
登録日2018-03-16
公開日2018-10-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献X-ray structure analysis of bacteriorhodopsin at 1.3 angstrom resolution.
Sci Rep, 8, 2018
5ZIM
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BU of 5zim by Molmil
Crystal structure of bacteriorhodopsin at 1.25 A resolution
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, RETINAL
著者Hasegawa, N, Jonotsuka, H, Miki, K, Takeda, K.
登録日2018-03-16
公開日2018-10-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献X-ray structure analysis of bacteriorhodopsin at 1.3 angstrom resolution.
Sci Rep, 8, 2018
5ZIN
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BU of 5zin by Molmil
Crystal structure of bacteriorhodopsin at 1.27 A resolution
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, RETINAL
著者Hasegawa, N, Jonotsuka, H, Miki, K, Takeda, K.
登録日2018-03-16
公開日2018-10-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献X-ray structure analysis of bacteriorhodopsin at 1.3 angstrom resolution.
Sci Rep, 8, 2018
6AIR
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BU of 6air by Molmil
High resolution structure of perdeuterated high-potential iron-sulfur protein
分子名称: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2018-08-24
公開日2019-08-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
6AIQ
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BU of 6aiq by Molmil
High resolution structure of recombinant high-potential iron-sulfur protein
分子名称: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2018-08-24
公開日2019-08-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
5ZCA
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BU of 5zca by Molmil
Crystal structure of lambda repressor (1-20) fused with maltose-binding protein
分子名称: CITRIC ACID, Repressor protein cI,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hanazono, Y, Takeda, K, Miki, K.
登録日2018-02-16
公開日2018-08-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Co-translational folding of alpha-helical proteins: structural studies of intermediate-length variants of the lambda repressor
Febs Open Bio, 8, 2018
6A2J
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BU of 6a2j by Molmil
Crystal structure of heme A synthase from Bacillus subtilis
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Heme A synthase, ...
著者Niwa, S, Takeda, K, Kosugi, M, Tsutsumi, E, Miki, K.
登録日2018-06-12
公開日2018-11-21
最終更新日2018-12-12
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of heme A synthase fromBacillus subtilis.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6JGH
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BU of 6jgh by Molmil
Crystal structure of the F99S/M153T/V163A/T203I variant of GFP at 0.94 A
分子名称: CHLORIDE ION, Green fluorescent protein
著者Eki, H, Tai, Y, Takaba, K, Hanazono, Y, Miki, K, Takeda, K.
登録日2019-02-14
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.94 Å)
主引用文献Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019
6JGI
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BU of 6jgi by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of GFP at 0.85 A
分子名称: Green fluorescent protein
著者Tai, Y, Takaba, K, Hanazono, Y, Miki, K, Takeda, K.
登録日2019-02-14
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019
6KKZ
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BU of 6kkz by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of perdeuterated GFP at pD 8.5
分子名称: Green fluorescent protein
著者Tai, Y, Takaba, K, Hanazono, Y, Dao, H.A, Miki, K, Takeda, K.
登録日2019-07-28
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献X-ray crystallographic studies on the hydrogen isotope effects of green fluorescent protein at sub-angstrom resolutions
Acta Crystallogr.,Sect.D, 75, 2019
6KL1
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BU of 6kl1 by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of non-deuterated GFP at pD 8.5
分子名称: Green fluorescent protein
著者Tai, Y, Takaba, K, Hanazono, Y, Dao, H.A, Miki, K, Takeda, K.
登録日2019-07-28
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.851 Å)
主引用文献X-ray crystallographic studies on the hydrogen isotope effects of green fluorescent protein at sub-angstrom resolutions
Acta Crystallogr.,Sect.D, 75, 2019
6KL0
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BU of 6kl0 by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of perdeuterated GFP at pD 7.0
分子名称: Green fluorescent protein
著者Tai, Y, Takaba, K, Hanazono, Y, Miki, K, Takeda, K.
登録日2019-07-28
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.798 Å)
主引用文献X-ray crystallographic studies on the hydrogen isotope effects of green fluorescent protein at sub-angstrom resolutions
Acta Crystallogr.,Sect.D, 75, 2019

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