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PDB: 7 results

2LIA
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BU of 2lia by Molmil
Solution NMR structure of a DNA dodecamer containing the 7-aminomethyl-7-deaza-2'-deoxyguanosine adduct
Descriptor: DNA (5'-D(*GP*AP*GP*AP*(2LA)P*CP*GP*CP*TP*CP*TP*C)-3')
Authors:Szulik, M.W, Ganguly, M, Wang, R, Gold, B, Stone, M.P.
Deposit date:2011-08-26
Release date:2012-08-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Site-Specific Stabilization of DNA by a Tethered Major Groove Amine, 7-Aminomethyl-7-deaza-2'-deoxyguanosine.
Biochemistry, 52, 2013
4F3U
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BU of 4f3u by Molmil
Crystal structure of 5-hydroxy-2'-deoxycytidine base paired with 2'-deoxyguanosine in Dickerson Drew Dodecamer
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5OC)P*GP*CP*G)-3'), MAGNESIUM ION
Authors:Szulik, M.W, Nocek, B, Joachimiak, A, Stone, M.P.
Deposit date:2012-05-09
Release date:2013-06-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Crystal structure of 5-hydroxy-2'-deoxycytidine base paired with 2'-deoxyguanosine in Dickerson Drew Dodecamer
TO BE PUBLISHED
4PWM
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BU of 4pwm by Molmil
Crystal structure of Dickerson Drew Dodecamer with 5-carboxycytosine
Descriptor: 5'-[CGCGAATT(5CC)GCG]-3'
Authors:Szulik, M.W, Pallan, P, Banerjee, S, Voehler, M, Egli, M, Stone, M.P.
Deposit date:2014-03-20
Release date:2015-02-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Differential stabilities and sequence-dependent base pair opening dynamics of watson-crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Biochemistry, 54, 2015
4QC7
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BU of 4qc7 by Molmil
Dodecamer structure of 5-formylcytosine containing DNA
Descriptor: short DNA strands
Authors:Szulik, M.W, Pallan, P, Egli, M, Stone, M.P.
Deposit date:2014-05-09
Release date:2015-02-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Differential stabilities and sequence-dependent base pair opening dynamics of watson-crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Biochemistry, 54, 2015
4I9V
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BU of 4i9v by Molmil
The atomic structure of 5-Hydroxymethyl 2'-deoxycitidine base paired with 2'-deoxyguanosine in Dickerson Drew Dodecamer
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5HC)P*GP*CP*G)-3'), MAGNESIUM ION, SPERMINE (FULLY PROTONATED FORM)
Authors:Nocek, B, Szulik, M.W, Joachimiak, A, Stone, M.P.
Deposit date:2012-12-05
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Differential stabilities and sequence-dependent base pair opening dynamics of watson-crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Biochemistry, 54, 2015
2MO2
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BU of 2mo2 by Molmil
Solution NMR structure of DNA dodecamer containing the 5-hydroxycytosine
Descriptor: DNA_(5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5OC)P*GP*CP*G)-3')
Authors:Donahue, P.S, Szulik, M.W, Stone, M.P.
Deposit date:2014-04-17
Release date:2014-09-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Characterization of 5-hydroxycytosine in DNA
To be Published
2MO7
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BU of 2mo7 by Molmil
Solution NMR structure of DNA dodecamer with A:C mismatch
Descriptor: DNA_(5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Donahue, P.S, Szulik, M.W, Stone, M.P.
Deposit date:2014-04-18
Release date:2014-09-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Characterization of 5-hydroxycytosine in DNA
To be Published

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