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PDB: 21 件
3BM3
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BU of 3bm3 by Molmil
Restriction endonuclease PspGI-substrate DNA complex
分子名称: CITRIC ACID, DNA (5'-D(*CP*AP*TP*CP*CP*AP*GP*GP*TP*AP*C)-3'), DNA (5'-D(*GP*GP*TP*AP*CP*CP*TP*GP*GP*AP*T)-3'), ...
著者Szczepanowski, R.H, Carpenter, M, Czapinska, H, Tamulaitis, G, Siksnys, V, Bhagwat, A, Bochtler, M.
登録日2007-12-12
公開日2008-09-16
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A direct crystallographic demonstration that Type II restriction endonuclease PspGI flips nucleotides
To be Published
1Z7L
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BU of 1z7l by Molmil
Crystal structure of fragment of mouse ubiquitin-activating enzyme
分子名称: HEXATANTALUM DODECABROMIDE, Ubiquitin-activating enzyme E1 1
著者Szczepanowski, R.H, Filipek, R, Bochtler, M.
登録日2005-03-25
公開日2005-04-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a fragment of mouse ubiquitin-activating enzyme.
J.Biol.Chem., 280, 2005
6QM2
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BU of 6qm2 by Molmil
NlaIV restriction endonuclease
分子名称: POTASSIUM ION, SODIUM ION, Type-2 restriction enzyme NlaIV
著者Czapinska, H, Siwek, W, Szczepanowski, R.H, Bujnicki, J.M, Bochtler, M, Skowronek, K.
登録日2019-02-01
公開日2019-05-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure and Directed Evolution of Specificity of NlaIV Restriction Endonuclease.
J.Mol.Biol., 431, 2019
3IMB
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BU of 3imb by Molmil
Alternative binding mode of restriction endonuclease BcnI to cognate DNA
分子名称: 5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3', R.BcnI
著者Sokolowska, M, Kaus-Drobek, M, Czapinska, H, Tamulaitis, G, Szczepanowski, R.H, Siksnys, V, Bochtler, M.
登録日2009-08-10
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献How BcnI and MvaI distinguish W from S
To be Published
2V31
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BU of 2v31 by Molmil
Structure of First Catalytic Cysteine Half-domain of mouse ubiquitin- activating enzyme
分子名称: UBIQUITIN-ACTIVATING ENZYME E1 X
著者Jaremko, L, Jaremko, M, Wojciechowski, W, Filipek, R, Szczepanowski, R.H, Bochtler, M, Zhukov, I.
登録日2007-06-11
公開日2008-06-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of First Catalytic Cysteine Half-Domain of Mouse Ubiquitin-Activating Enzyme
To be Published
5NYW
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BU of 5nyw by Molmil
Anbu (ancestral beta-subunit) from Yersinia bercovieri
分子名称: 1,2-ETHANEDIOL, AZIDE ION, CHLORIDE ION, ...
著者Piasecka, A, Czapinska, H, Vielberg, M, Szczepanowski, R.H, Reed, S, Groll, M, Bochtler, M.
登録日2017-05-12
公開日2017-05-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献The Y. bercovieri Anbu crystal structure sheds light on the evolution of highly (pseudo)symmetric multimers.
J. Mol. Biol., 430, 2018
4OL8
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BU of 4ol8 by Molmil
Ty3 reverse transcriptase bound to DNA/RNA
分子名称: 5'-D(*CP*AP*TP*CP*TP*TP*CP*CP*TP*CP*TP*CP*TP*CP*TP*C)-3', 5'-R(*CP*UP*GP*AP*GP*AP*GP*AP*GP*AP*GP*GP*AP*AP*GP*AP*UP*G)-3', Reverse transcriptase/ribonuclease H, ...
著者Nowak, E, Miller, J.T, Bona, M.K, Studnicka, J, Szczepanowski, R.H, Jurkowski, J, Le Grice, S.F.J, Nowotny, M.
登録日2014-01-23
公開日2014-03-05
最終更新日2014-04-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Ty3 reverse transcriptase complexed with an RNA-DNA hybrid shows structural and functional asymmetry.
Nat.Struct.Mol.Biol., 21, 2014
2GB7
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BU of 2gb7 by Molmil
Metal-depleted Ecl18kI in complex with uncleaved, modified DNA
分子名称: DNA STRAND 1, DNA STRAND 2, R.Ecl18kI
著者Bochtler, M, Szczepanowski, R.H, Tamulaitis, G, Grazulis, S, Czapinska, H, Manakova, E, Siksnys, V.
登録日2006-03-10
公開日2006-06-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Nucleotide flips determine the specificity of the Ecl18kI restriction endonuclease
Embo J., 25, 2006
2FQZ
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BU of 2fqz by Molmil
Metal-depleted Ecl18kI in complex with uncleaved DNA
分子名称: DNA STRAND 1, DNA STRAND 2, R.Ecl18kI
著者Bochtler, M, Szczepanowski, R.H, Tamulaitis, G, Grazulis, S, Czapinska, H, Manakova, E, Siksnys, V.
登録日2006-01-18
公開日2006-06-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Nucleotide flips determine the specificity of the Ecl18kI restriction endonuclease
Embo J., 25, 2006
4XLG
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BU of 4xlg by Molmil
C. glabrata Slx1 in complex with Slx4CCD.
分子名称: CHLORIDE ION, Structure-specific endonuclease subunit SLX1, Structure-specific endonuclease subunit SLX4, ...
著者Gaur, V, Wyatt, H.D.M, Komorowska, W, Szczepanowski, R.H, de Sanctis, D, Gorecka, K.M, West, S.C, Nowotny, M.
登録日2015-01-13
公開日2015-03-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structural and Mechanistic Analysis of the Slx1-Slx4 Endonuclease.
Cell Rep, 10, 2015
4XM5
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BU of 4xm5 by Molmil
C. glabrata Slx1.
分子名称: CHLORIDE ION, Structure-specific endonuclease subunit SLX1, ZINC ION
著者Gaur, V, Wyatt, H.D.M, Komorowska, W, Szczepanowski, R.H, de Sanctis, D, Gorecka, K.M, West, S.C, Nowotny, M.
登録日2015-01-14
公開日2015-03-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural and Mechanistic Analysis of the Slx1-Slx4 Endonuclease.
Cell Rep, 10, 2015
2OA9
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BU of 2oa9 by Molmil
Restriction endonuclease MvaI in the absence of DNA
分子名称: ACETATE ION, CADMIUM ION, CHLORIDE ION, ...
著者Kaus-Drobek, M, Czapinska, H, Sokolowska, M, Tamulaitis, G, Szczepanowski, R.H, Urbanke, K, Siksnys, V, Bochtler, M.
登録日2006-12-15
公開日2007-02-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically.
Nucleic Acids Res., 35, 2007
2OAA
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BU of 2oaa by Molmil
Restriction endonuclease MvaI-cognate DNA substrate complex
分子名称: 5'-D(*CP*AP*TP*CP*CP*AP*GP*GP*TP*AP*C)-3', 5'-D(*GP*GP*TP*AP*CP*CP*TP*GP*GP*AP*T)-3', CALCIUM ION, ...
著者Kaus-Drobek, M, Czapinska, H, Sokolowska, M, Tamulaitis, G, Szczepanowski, R.H, Urbanke, K, Siksnys, V, Bochtler, M.
登録日2006-12-15
公開日2007-02-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically.
Nucleic Acids Res., 35, 2007
2ODH
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BU of 2odh by Molmil
Restriction Endonuclease BCNI in the Absence of DNA
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, R.BcnI
著者Sokolowska, M, Kaus-Drobek, M, Czapinska, H, Tamulaitis, G, Szczepanowski, R.H, Urbanke, K, Siksnys, V, Bochtler, M.
登録日2006-12-22
公開日2007-03-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA.
J.Mol.Biol., 369, 2007
2ODI
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BU of 2odi by Molmil
Restriction Endonuclease BCNI-Cognate DNA Substrate Complex
分子名称: 5'-D(*AP*AP*CP*CP*CP*GP*GP*AP*GP*AP*C)-3', 5'-D(*CP*TP*CP*CP*GP*GP*GP*TP*TP*GP*T)-3', CALCIUM ION, ...
著者Sokolowska, M, Kaus-Drobek, M, Czapinska, H, Tamulaitis, G, Szczepanowski, R.H, Urbanke, C, Siksnys, V, Bochtler, M.
登録日2006-12-22
公開日2007-03-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA.
J.Mol.Biol., 369, 2007
2Q10
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BU of 2q10 by Molmil
RESTRICTION ENDONUCLEASE BcnI (WILD TYPE)-COGNATE DNA SUBSTRATE COMPLEX
分子名称: CALCIUM ION, CHLORIDE ION, DNA (5'-D(*AP*AP*CP*CP*CP*GP*GP*AP*GP*AP*C)-3'), ...
著者Sokolowska, M, Kaus-Drobek, M, Czapinska, H, Tamulaitis, G, Szczepanowski, R.H, Urbanke, C, Siksnys, V, Bochtler, M.
登録日2007-05-23
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Monomeric Restriction Endonuclease BcnI in the Apo Form and in an Asymmetric Complex with Target DNA.
J.Mol.Biol., 369, 2007
1X9Y
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BU of 1x9y by Molmil
The prostaphopain B structure
分子名称: cysteine proteinase
著者Filipek, R, Szczepanowski, R, Sabat, A, Potempa, J, Bochtler, M.
登録日2004-08-24
公開日2004-11-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Prostaphopain B structure: a comparison of proregion-mediated and staphostatin-mediated protease inhibition.
Biochemistry, 43, 2004
2LZJ
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BU of 2lzj by Molmil
Refined solution structure and dynamics of First Catalytic Cysteine Half-domain from mouse E1 enzyme
分子名称: Ubiquitin-like modifier-activating enzyme 1
著者Jaremko, M, Jaremko, L, Nowakowski, M, Szczepanowski, R.H, Filipek, R, Wojciechowski, M, Bochtler, M, Ejchart, A.
登録日2012-10-03
公開日2013-09-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structural studies of the first catalytic half-domain of ubiquitin activating enzyme.
J.Struct.Biol., 185, 2014
1YR3
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BU of 1yr3 by Molmil
Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
分子名称: SULFATE ION, XANTHINE, Xanthosine phosphorylase
著者Dandanell, G, Szczepanowski, R.H, Kierdaszuk, B, Shugar, D, Bochtler, M.
登録日2005-02-03
公開日2005-04-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
J.Mol.Biol., 348, 2005
1YQU
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Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
分子名称: GUANINE, PHOSPHATE ION, Xanthosine phosphorylase
著者Dandanell, G, Szczepanowski, R.H, Kierdaszuk, B, Shugar, D, Bochtler, M.
登録日2005-02-02
公開日2005-04-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
J.Mol.Biol., 348, 2005
1YQQ
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BU of 1yqq by Molmil
Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
分子名称: GUANINE, PHOSPHATE ION, Xanthosine phosphorylase
著者Dandanell, G, Szczepanowski, R.H, Kierdaszuk, B, Shugar, D, Bochtler, M.
登録日2005-02-02
公開日2005-04-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Escherichia coli Purine Nucleoside Phosphorylase II, the Product of the xapA Gene
J.Mol.Biol., 348, 2005

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