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PDB: 110 件

418D
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5'-R(*GP*UP*GP*CP*AP*CP*A)-D(P*C)-3'
分子名称: RNA (5'-R(*GP*UP*GP*CP*AP*CP*AP*C)-3')
著者Mitra, S.N, Biswas, R, Shi, K, Sundaralingam, M.
登録日1998-08-12
公開日2003-06-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of an RNA duplex [r(gugcaca)dC]2 with 3'-dinucleoside overhangs forming a superhelix.
J.Biomol.Struct.Dyn., 11, 2000
420D
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CRYSTAL STRUCTURE OF A 16-MER RNA DUPLEX WITH NON-ADJACENT A(ANTI).G(SYN) MISMATCHES
分子名称: RNA (5'-R(*GP*CP*AP*GP*AP*GP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'), SODIUM ION
著者Pan, B, Mitra, S.N, Sundaralingam, M.
登録日1998-08-13
公開日1999-01-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of an RNA 16-mer duplex R(GCAGAGUUAAAUCUGC)2 with nonadjacent G(syn).A+(anti) mispairs.
Biochemistry, 38, 1999
421D
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5'-D(*TP*TP*CP*TP*TP*(BRO)CP*TP*TP*C)-3', 5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*A)-3'
分子名称: DNA (5'-D(*TP*TP*CP*TP*TP*(CBR)P*TP*TP*C)-3'), RNA (5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*A)-3')
著者Xiong, Y, Sundaralingam, M.
登録日1998-08-16
公開日1999-01-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and conformation of a DNA-RNA hybrid duplex with a polypurine RNA strand: d(TTCTTBr5CTTC)-r(GAAGAAGAA).
Structure, 6, 1998
474D
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A NOVEL END-TO-END BINDING OF TWO NETROPSINS TO THE DNA DECAMER D(CCCCCIIIII)2
分子名称: DNA (5'-D(*CP*CP*CP*(CBR)P*CP*IP*IP*IP*IP*I)-3'), NETROPSIN
著者Chen, X, Rao, S.T, Sekar, K, Sundaralingam, M.
登録日1998-01-14
公開日1998-12-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A novel end-to-end binding of two netropsins to the DNA decamers d(CCCCCIIIII)2, d(CCCBr5CCIIIII)2and d(CBr5CCCCIIIII)2.
Nucleic Acids Res., 26, 1998
1FLV
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STRUCTURE OF THE OXIDIZED LONG CHAIN FLAVODOXIN FROM ANABAENA 7120 AT 2 ANGSTROMS RESOLUTION
分子名称: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
著者Rao, S.T, Sundaralingam, M.
登録日1992-07-02
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the oxidized long-chain flavodoxin from Anabaena 7120 at 2 A resolution.
Protein Sci., 1, 1992
378D
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STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA
分子名称: DISTAMYCIN A, DNA (5'-D(*GP*TP*AP*TP*AP*TP*AP*C)-3'), SODIUM ION
著者Mitra, S.N, Wahl, M.C, Sundaralingam, M.
登録日1998-01-28
公開日1999-03-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the side-by-side binding of distamycin to d(GTATATAC)2.
Acta Crystallogr.,Sect.D, 55, 1999
331D
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CRYSTAL STRUCTURE OF D(GCGCGCG) WITH 5'-OVERHANG G'S
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*CP*GP*CP*GP*CP*G)-3')
著者Pan, B, Ban, C, Wahl, M, Sundaralingam, M.
登録日1997-05-13
公開日1997-09-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of d(GCGCGCG) with 5'-overhang G residues.
Biophys.J., 73, 1997
315D
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CRYSTAL STRUCTURE OF AN ALTERNATING OCTAMER R(GUAUGUA)D(C) WITH ADJACENT G-U WOBBLE PAIRS
分子名称: DNA/RNA (5'-R(*GP*UP*AP*UP*GP*UP*AP*)-D(*C)-3')
著者Biswas, R, Wahl, M.C, Ban, C, Sundaralingam, M.
登録日1997-02-26
公開日1997-09-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Crystal structure of an alternating octamer r(GUAUGUA)dC with adjacent G x U wobble pairs
J.Mol.Biol., 267, 1997
1JZV
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Crystal structure of a bulged RNA from the SL2 stem-loop of the HIV-1 psi-RNA
分子名称: 5'-R(*CP*AP*GP*UP*AP*CP*GP*(5IC)P*C)-3', 5'-R(*GP*GP*CP*GP*AP*CP*(5BU)P*G)-3', MAGNESIUM ION
著者Xiong, Y, Sudarsanakumar, C, Deng, J, Pan, B, Sundaralingam, M.
登録日2001-09-17
公開日2003-11-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of a Bulged RNA from the SL2 Stem-loop of the HIV-1 psi-RNA
To be Published
138D
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A-DNA DECAMER D(GCGGGCCCGC)-HEXAGONAL CRYSTAL FORM
分子名称: DNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3')
著者Ramakrishnan, B, Sundaralingam, M.
登録日1993-09-15
公開日1994-01-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Evidence for crystal environment dominating base sequence effects on DNA conformation: crystal structures of the orthorhombic and hexagonal polymorphs of the A-DNA decamer d(GCGGGCCCGC) and comparison with their isomorphous crystal structures.
Biochemistry, 32, 1993
137D
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A-DNA DECAMER D(GCGGGCCCGC)-ORTHORHOMBIC CRYSTAL FORM
分子名称: DNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3')
著者Ramakrishnan, B, Sundaralingam, M.
登録日1993-09-15
公開日1994-01-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evidence for crystal environment dominating base sequence effects on DNA conformation: crystal structures of the orthorhombic and hexagonal polymorphs of the A-DNA decamer d(GCGGGCCCGC) and comparison with their isomorphous crystal structures.
Biochemistry, 32, 1993
1J8G
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X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution
分子名称: 5'-R(*UP*GP*GP*GP*GP*U)-3', CALCIUM ION, SODIUM ION, ...
著者Deng, J, Xiong, Y, Sundaralingam, M.
登録日2001-05-21
公開日2001-11-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (0.61 Å)
主引用文献X-ray analysis of an RNA tetraplex (UGGGGU)(4) with divalent Sr(2+) ions at subatomic resolution (0.61 A).
Proc.Natl.Acad.Sci.USA, 98, 2001
1J6S
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Crystal Structure of an RNA Tetraplex (UGAGGU)4 with A-tetrads, G-tetrads, U-tetrads and G-U octads
分子名称: 5'-R(*(BRUP*GP*AP*GP*GP*U)-3', BARIUM ION, SODIUM ION
著者Pan, B, Xiong, Y, Shi, K, Deng, J, Sundaralingam, M.
登録日2002-07-10
公開日2003-08-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of an RNA purine-rich tetraplex containing adenine tetrads: implications for specific binding in RNA tetraplexes
Structure, 11, 2003
116D
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CRYSTAL AND MOLECULAR STRUCTURE OF THE A-DNA DODECAMER D(CCGTACGTACGG): CHOICE OF FRAGMENT HELICAL AXIS
分子名称: DNA (5'-D(*CP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*G)-3')
著者Bingman, C.A, Zon, G, Sundaralingam, M.
登録日1993-02-10
公開日1993-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal and molecular structure of the A-DNA dodecamer d(CCGTACGTACGG). Choice of fragment helical axis.
J.Mol.Biol., 227, 1992
117D
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CRYSTAL AND MOLECULAR STRUCTURE OF THE ALTERNATING DODECAMER D(GCGTACGTACGC) IN THE A-DNA FORM: COMPARISON WITH THE ISOMORPHOUS NON-ALTERNATING DODECAMER D(CCGTACGTACGG)
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*C)-3')
著者Bingman, C.A, Jain, S, Zon, G, Sundaralingam, M.
登録日1993-02-10
公開日1993-04-15
最終更新日2023-03-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGTACGG).
Nucleic Acids Res., 20, 1992
1D79
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HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION
分子名称: DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3')
著者Thota, N, Li, X.H, Bingman, C.A, Sundaralingam, M.
登録日1992-06-12
公開日1993-04-15
最終更新日2023-03-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献High-resolution refinement of the hexagonal A-DNA octamer d(GTGTACAC) at 1.4 A.
Acta Crystallogr.,Sect.D, 49, 1993
1D78
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HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION
分子名称: DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3')
著者Thota, N, Li, X.H, Bingman, C.A, Sundaralingam, M.
登録日1992-06-12
公開日1993-04-15
最終更新日2023-03-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献High-resolution refinement of the hexagonal A-DNA octamer d(GTGTACAC) at 1.4 A.
Acta Crystallogr.,Sect.D, 49, 1993
1DNS
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BASE ONLY BINDING OF SPERMINE IN THE DEEP GROOVE OF THE A-DNA OCTAMER D(GTGTACAC)
分子名称: DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3'), SPERMINE
著者Jain, S.C, Zon, G, Sundaralingam, M.
登録日1989-02-22
公開日1990-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Base only binding of spermine in the deep groove of the A-DNA octamer d(GTGTACAC).
Biochemistry, 28, 1989
1DN8
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STRUCTURE OF A Z-DNA WITH TWO DIFFERENT BACKBONE CHAIN CONFORMATIONS. STABILIZATION OF THE DECADEOXYOLIGONUCLEOTIDE D(CGTACGTACG) BY (CO(NH3)6)3+ BINDING TO THE GUANINE
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*P*CP*GP*TP*AP*CP*GP*TP*AP*CP*G)-3')
著者Brennan, R.G, Westhof, E, Sundaralingam, M.
登録日1987-05-12
公開日1988-04-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a Z-DNA with two different backbone chain conformations. Stabilization of the decadeoxyoligonucleotide d(CGTACGTACG) by [Co(NH3)6]3+ binding to the guanine.
J.Biomol.Struct.Dyn., 3, 1986
1J9H
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Crystal Structure of an RNA Duplex with Uridine Bulges
分子名称: 5'-R(*GP*UP*GP*UP*CP*GP*(CBR)P*AP*C)-3', CALCIUM ION
著者Xiong, Y, Deng, J, Sudarsanakumar, C, Sundaralingam, M.
登録日2001-05-25
公開日2001-10-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of an RNA duplex r(gugucgcac)(2) with uridine bulges.
J.Mol.Biol., 313, 2001
1JO2
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Crystal Structure of the B-DNA Hexamer (CgATCG).Daunomycin Complex Containing a Ribose at the Intercalation Site
分子名称: 5'-D(*C)-R(P*G)-D(P*AP*TP*CP*G)-3', DAUNOMYCIN
著者Shi, K, Pan, B, Sundaralingam, M.
登録日2001-07-26
公開日2003-07-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a B-form DNA/RNA chimera (dC)(rG)d(ATCG) complexed with daunomycin at 1.5 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
1L3Z
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Crystal Structure Analysis of an RNA Heptamer
分子名称: 5'-R(*GP*UP*AP*UP*AP*CP*A)-3', SODIUM ION
著者Shi, K, Pan, B, Sundaralingam, M.
登録日2002-03-04
公開日2003-02-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The crystal structure of an alternating RNA heptamer r(GUAUACA) forming a six base-paired duplex with 3'-end adenine overhangs
Nucleic Acids Res., 31, 2003
1JUX
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1.6A Resolution Crystal Structures of the DNA Octamers d(IUATATAC) and d(ITITACAC):Binding of Two Distamycin Drugs Side-by-Side
分子名称: 5'-D(*IP*TP*IP*TP*AP*CP*AP*C)-3', DISTAMYCIN A
著者Deng, J, Pan, B, Sundaralingam, M.
登録日2001-08-28
公開日2004-01-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of d(ITITACAC) complexed with distamycin at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
1LNT
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Crystal Structure of the Highly Conserved RNA Internal Loop of SRP
分子名称: 5'-R(*CP*GP*GP*AP*AP*GP*CP*AP*GP*(CBV)P*GP*C)-3', 5'-R(*GP*CP*GP*UP*CP*AP*GP*GP*UP*CP*(CBV)P*G)-3', CALCIUM ION, ...
著者Deng, J, Xiong, Y, Pan, B, Sundaralingam, M.
登録日2002-05-03
公開日2003-06-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of an RNA dodecamer containing a fragment from SRP domain IV of Escherichia coli.
Acta Crystallogr.,Sect.D, 59, 2003
1IK5
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Crystal Structure of a 14mer RNA Containing Double UU Bulges in Two Crystal Forms: A Novel U*(AU) Intramolecular Base Triple
分子名称: 5'-R(*GP*GP*UP*AP*UP*UP*UP*CP*GP*GP*UP*AP*(CBR)P*C)-3', 5'-R(*GP*GP*UP*AP*UP*UP*UP*UP*GP*GP*UP*AP*(CBR)P*C)-3', MAGNESIUM ION
著者Deng, J, Xiong, Y, Sudarsanakumar, C, Shi, K, Sundaralingam, M.
登録日2001-05-02
公開日2001-11-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of two forms of a 14-mer RNA/DNA chimer duplex with double UU bulges: a novel intramolecular U*(A x U) base triple.
RNA, 7, 2001

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