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PDB: 56 results

1H65
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BU of 1h65 by Molmil
Crystal structure of pea Toc34 - a novel GTPase of the chloroplast protein translocon
Descriptor: CHLOROPLAST OUTER ENVELOPE PROTEIN OEP34, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Sun, Y.J, Forouhar, F, Li, H.M, Tu, S.L, Kao, S, Shr, H.L, Chou, C.C, Hsiao, C.D.
Deposit date:2001-06-06
Release date:2002-01-29
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Pea Toc34 - a Novel Gtpase of the Chloroplast Protein Translocon
Nat.Struct.Biol., 9, 2002
5EZ1
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BU of 5ez1 by Molmil
Crystal Structure of Cell Binding Factor 2 from Helicobacter pylori in complex with I2CA
Descriptor: 1H-indole-2-carboxylic acid, Putative peptidyl-prolyl cis-trans isomerase HP_0175
Authors:Sun, Y.J, Chu, C.H, Tsai, Y.C.
Deposit date:2015-11-26
Release date:2016-03-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Helicobacter pylori cell binding factor 2: Insights into domain motion.
J.Struct.Biol., 194, 2016
6MYE
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BU of 6mye by Molmil
Crystal structure of human Scribble PDZ1 domain in complex with internal PDZ binding motif of Src homology 3 domain-containing guanine nucleotide exchange factor (SGEF)
Descriptor: FORMIC ACID, Protein scribble homolog, Rho guanine nucleotide exchange factor 26, ...
Authors:Sun, Y.J, Hou, T, Gakhar, L, Fuentes, E.J.
Deposit date:2018-11-01
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:SGEF forms a complex with Scribble and Dlg1 and regulates epithelial junctions and contractility.
J.Cell Biol., 218, 2019
6MYF
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Crystal structure of free human Scribble PDZ1 domain
Descriptor: Protein scribble homolog
Authors:Sun, Y.J, Hou, T, Gakhar, L, Fuentes, E.J.
Deposit date:2018-11-01
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:SGEF forms a complex with Scribble and Dlg1 and regulates epithelial junctions and contractility.
J.Cell Biol., 218, 2019
6NID
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BU of 6nid by Molmil
Crystal structure of a human calcium/calmodulin dependent serine protein kinase (CASK) PDZ domain in complex with Neurexin-1 peptide
Descriptor: 1,2-ETHANEDIOL, Neurexin-1, Peripheral plasma membrane protein CASK
Authors:Sun, Y.J, Gakhar, L, Fuentes, E.J.
Deposit date:2018-12-27
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:CASK PDZ domain specificity
To be published
6NEK
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BU of 6nek by Molmil
Crystal structure of a consensus PDZ domain
Descriptor: 1,2-ETHANEDIOL, Consensus PDZ domain
Authors:Sun, Y.J, Gakhar, L, Fuentes, E.J.
Deposit date:2018-12-17
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Consensus PDZ domain
To be published
6NH9
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BU of 6nh9 by Molmil
Crystal structure of a human calcium/calmodulin dependent serine protein kinase (CASK) PDZ domain
Descriptor: Peripheral plasma membrane protein CASK
Authors:Sun, Y.J, Gakhar, L, Fuentes, E.J.
Deposit date:2018-12-21
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:CASK PDZ domain specificity
To be published
7CJQ
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BU of 7cjq by Molmil
Structure of DLA-88*001:04
Descriptor: ARG-THR-ILE-SER-TYR-THR-TYR-PRO-PHE, Beta-2-microglobulin, MHC class I DLA-88
Authors:Sun, Y.J, Ma, L.Z, Li, S.
Deposit date:2020-07-12
Release date:2020-08-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of canine MHC class I at 2.7 Angstroms resolution
To Be Published
2PV6
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BU of 2pv6 by Molmil
HIV-1 gp41 Membrane Proximal Ectodomain Region peptide in DPC micelle
Descriptor: Envelope glycoprotein
Authors:Sun, Z.-Y.J, Oh, K.J, Kim, M, Reinherz, E.L, Wagner, G.
Deposit date:2007-05-09
Release date:2008-03-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:HIV-1 broadly neutralizing antibody extracts its epitope from a kinked gp41 ectodomain region on the viral membrane
Immunity, 28, 2008
1CI5
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BU of 1ci5 by Molmil
GLYCAN-FREE MUTANT ADHESION DOMAIN OF HUMAN CD58 (LFA-3)
Descriptor: PROTEIN (LYMPHOCYTE FUNCTION-ASSOCIATED ANTIGEN 3(CD58))
Authors:Sun, Z.Y.J, Dotsch, V, Kim, M, Li, J, Reinherz, E.L, Wagner, G.
Deposit date:1999-04-07
Release date:1999-06-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Functional glycan-free adhesion domain of human cell surface receptor CD58: design, production and NMR studies.
EMBO J., 18, 1999
1JBJ
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BU of 1jbj by Molmil
CD3 Epsilon and gamma Ectodomain Fragment Complex in Single-Chain Construct
Descriptor: CD3 Epsilon and gamma Ectodomain Fragment Complex
Authors:Sun, Z.-Y.J, Kim, K.S, Wagner, G, Reinherz, E.L.
Deposit date:2001-06-05
Release date:2001-12-05
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Mechanisms contributing to T cell receptor signaling and assembly revealed by the solution structure of an ectodomain fragment of the CD3 epsilon gamma heterodimer.
Cell(Cambridge,Mass.), 105, 2001
1XMW
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BU of 1xmw by Molmil
CD3 EPSILON AND DELTA ECTODOMAIN FRAGMENT COMPLEX IN SINGLE-CHAIN CONSTRUCT
Descriptor: Chimeric CD3 mouse Epsilon and sheep Delta Ectodomain Fragment Complex
Authors:Sun, Z.-Y.J, Kim, S.T, Kim, I.C, Fahmy, A, Reinherz, E.L, Wagner, G.
Deposit date:2004-10-04
Release date:2004-11-30
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure of the CD3epsilondelta ectodomain and comparison with CD3epsilongamma as a basis for modeling T cell receptor topology and signaling.
Proc.Natl.Acad.Sci.Usa, 101, 2004
5IJ4
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BU of 5ij4 by Molmil
Solution structure of AN1-type zinc finger domain from Cuz1 (Cdc48 associated ubiquitin-like/zinc-finger protein-1)
Descriptor: CDC48-associated ubiquitin-like/zinc finger protein 1, ZINC ION
Authors:Sun, Z.-Y.J, Hanna, J, Wagner, G, Bhanu, M.K, Allan, M, Arthanari, H.
Deposit date:2016-03-01
Release date:2016-10-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of the Cuz1 AN1 Zinc Finger Domain: An Exposed LDFLP Motif Defines a Subfamily of AN1 Proteins.
Plos One, 11, 2016
4UMK
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BU of 4umk by Molmil
The complex of Spo0J and parS DNA in chromosomal partition system
Descriptor: DNA, PROBABLE CHROMOSOME-PARTITIONING PROTEIN PARB, SULFATE ION
Authors:Chen, B.W, Chu, C.H, Tung, J.Y, Hsu, C.E, Hsiao, C.D, Sun, Y.J.
Deposit date:2014-05-19
Release date:2015-05-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.096 Å)
Cite:Insights into ParB spreading from the complex structure of Spo0J and parS.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
1E9L
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BU of 1e9l by Molmil
The crystal structure of novel mammalian lectin Ym1 suggests a saccharide binding site
Descriptor: 2-amino-2-deoxy-beta-D-glucopyranose, YM1 SECRETORY PROTEIN
Authors:Hsiao, C.D, Sun, Y.J.
Deposit date:2000-10-21
Release date:2001-03-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Crystal Structure of a Novel Mammalian Lectin, Ym1, Suggests a Saccharide Binding Site
J.Biol.Chem., 276, 2001
6P3Q
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BU of 6p3q by Molmil
Calpain-5 (CAPN5) Protease Core (PC)
Descriptor: Calpain-5
Authors:Velez, G, Sun, Y.J, Khan, S, Yang, J, Koster, H.J, Lokesh, G, Mahajan, V.
Deposit date:2019-05-24
Release date:2020-02-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Insights into the Unique Activation Mechanisms of a Non-classical Calpain and Its Disease-Causing Variants.
Cell Rep, 30, 2020
4A7W
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BU of 4a7w by Molmil
Crystal structure of uridylate kinase from Helicobacter pylori
Descriptor: GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, URIDYLATE KINASE
Authors:Chu, C.H, Chen, P.C, Liu, M.H, Sun, Y.J.
Deposit date:2011-11-15
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of Helicobacter Pylori Uridylate Kinase: Insight Into Release of the Product Udp
Acta Crystallogr.,Sect.D, 68, 2012
4A7X
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BU of 4a7x by Molmil
Crystal structure of uridylate kinase from Helicobacter pylori
Descriptor: URIDINE-5'-DIPHOSPHATE, URIDYLATE KINASE
Authors:Chu, C.H, Liu, M.H, Chen, P.C, Sun, Y.J.
Deposit date:2011-11-15
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structures of Helicobacter Pylori Uridylate Kinase: Insight Into Release of the Product Udp
Acta Crystallogr.,Sect.D, 68, 2012
2W58
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BU of 2w58 by Molmil
Crystal Structure of the DnaI
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Tsai, K.L, Lo, Y.H, Sun, Y.J, Hsiao, C.D.
Deposit date:2008-12-08
Release date:2009-12-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Interplay between the Replicative Helicase Dnac and its Loader Protein Dnai from Geobacillus Kaustophilus.
J.Mol.Biol., 393, 2009
2VYE
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BU of 2vye by Molmil
Crystal Structure of the DnaC-ssDNA complex
Descriptor: 5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP)-3', REPLICATIVE DNA HELICASE
Authors:Lo, Y.H, Tsai, K.L, Sun, Y.J, Hsiao, C.D.
Deposit date:2008-07-23
Release date:2008-12-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:The Crystal Structure of a Replicative Hexameric Helicase Dnac and its Complex with Single-Stranded DNA.
Nucleic Acids Res., 37, 2009
2VYF
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BU of 2vyf by Molmil
Crystal Structure of the DnaC
Descriptor: GOLD ION, REPLICATIVE DNA HELICASE
Authors:Lo, Y.H, Tsai, K.L, Sun, Y.J, Hsiao, C.D.
Deposit date:2008-07-23
Release date:2008-12-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The Crystal Structure of a Replicative Hexameric Helicase Dnac and its Complex with Single-Stranded DNA.
Nucleic Acids Res., 37, 2009
8YK9
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BU of 8yk9 by Molmil
Structure of Saccharolobus solfataricus SegC (SSO0033) protein, ATP soak
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SegC
Authors:Yen, C.Y, Lin, M.G, Sun, Y.J, Hsiao, C.D.
Deposit date:2024-03-04
Release date:2024-08-07
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Unraveling the structure and function of a novel SegC protein interacting with the SegAB chromosome segregation complex in Archaea.
Nucleic Acids Res., 52, 2024
6LX0
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BU of 6lx0 by Molmil
Structure of Leptospira santarosai serovar shermani LRR protein LSS11580
Descriptor: Membrane protein
Authors:Chu, C.H, Hsu, S.H, Yang, C.W, Sun, Y.J.
Deposit date:2020-02-10
Release date:2020-12-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal structure of Leptospira leucine-rich repeat 20 reveals a novel E-cadherin binding protein to induce NGAL expression in HK2 cells.
Biochem.J., 477, 2020
4BFN
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BU of 4bfn by Molmil
Crystal Structure of the Starch-Binding Domain from Rhizopus oryzae Glucoamylase in Complex with isomaltotetraose
Descriptor: GLUCOAMYLASE, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose
Authors:Chu, C.H, Li, K.M, Lin, S.W, Sun, Y.J.
Deposit date:2013-03-21
Release date:2013-10-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Crystal Structures of Starch Binding Domain from Rhizopus Oryzae Glucoamylase in Complex with Isomaltooligosaccharide: Insights Into Polysaccharide Binding Mechanism of Cbm21 Family.
Proteins, 82, 2014
4BFO
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BU of 4bfo by Molmil
Crystal Structure of the Starch-Binding Domain from Rhizopus oryzae Glucoamylase in Complex with isomaltotriose
Descriptor: GLUCOAMYLASE, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose
Authors:Chu, C.H, Li, K.M, Lin, S.W, Sun, Y.J.
Deposit date:2013-03-21
Release date:2013-10-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.175 Å)
Cite:Crystal Structures of Starch Binding Domain from Rhizopus Oryzae Glucoamylase in Complex with Isomaltooligosaccharide: Insights Into Polysaccharide Binding Mechanism of Cbm21 Family.
Proteins, 82, 2014

 

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