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PDB: 53 results

5GPJ
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Crystal Structure of Proton-Pumping Pyrophosphatase
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Pyrophosphate-energized vacuolar membrane proton pump
Authors:Li, K.M, Tsai, J.Y, Sun, Y.J.
Deposit date:2016-08-03
Release date:2016-12-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Membrane pyrophosphatases from Thermotoga maritima and Vigna radiata suggest a conserved coupling mechanism
Nat Commun, 7, 2016
8JMJ
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Structure of Helicobacter pylori Soj-DNA-Spo0J complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3'), DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3'), ...
Authors:Wu, C.T, Chu, C.H, Sun, Y.J.
Deposit date:2023-06-05
Release date:2024-05-29
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Insights into the molecular mechanism of ParABS system in chromosome partition by HpParA and HpParB.
Nucleic Acids Res., 2024
8JML
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Structure of Helicobacter pylori Soj protein mutant, D41A
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SpoOJ regulator (Soj)
Authors:Wu, C.T, Chu, C.H, Sun, Y.J.
Deposit date:2023-06-05
Release date:2024-05-29
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into the molecular mechanism of ParABS system in chromosome partition by HpParA and HpParB.
Nucleic Acids Res., 2024
8JMK
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Structure of Helicobacter pylori Soj mutant, D41A bound to DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3'), DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3'), ...
Authors:Wu, C.T, Chu, C.H, Sun, Y.J.
Deposit date:2023-06-05
Release date:2024-05-29
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Insights into the molecular mechanism of ParABS system in chromosome partition by HpParA and HpParB.
Nucleic Acids Res., 2024
6IUB
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Structure of Helicobacter pylori Soj protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SpoOJ regulator (Soj)
Authors:Chu, C.H, Yen, C.Y, Sun, Y.J.
Deposit date:2018-11-28
Release date:2019-02-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Crystal structures of HpSoj-DNA complexes and the nucleoid-adaptor complex formation in chromosome segregation.
Nucleic Acids Res., 47, 2019
6IUD
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BU of 6iud by Molmil
Structure of Helicobacter pylori Soj-ADP complex bound to DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3'), DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3'), ...
Authors:Yen, C.Y, Chu, C.H, Sun, Y.J.
Deposit date:2018-11-28
Release date:2019-02-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.506 Å)
Cite:Crystal structures of HpSoj-DNA complexes and the nucleoid-adaptor complex formation in chromosome segregation.
Nucleic Acids Res., 47, 2019
6JSX
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Structure of a flagellin protein, HpFlaG
Descriptor: Flagellar biosynthesis protein FlaG
Authors:Tsai, J.Y, Sun, Y.J, Hsiao, C.D.
Deposit date:2019-04-08
Release date:2020-04-08
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the flagellin protein FlaG from Helicobacter pylori.
J Chin Chem Soc, 66, 2019
6IUC
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BU of 6iuc by Molmil
Structure of Helicobacter pylori Soj-ATP complex bound to DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3'), DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3'), ...
Authors:Chu, C.H, Yen, C.Y, Sun, Y.J.
Deposit date:2018-11-28
Release date:2019-02-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structures of HpSoj-DNA complexes and the nucleoid-adaptor complex formation in chromosome segregation.
Nucleic Acids Res., 47, 2019
6AEZ
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BU of 6aez by Molmil
Crystal structure of human CCL5 trimer
Descriptor: C-C motif chemokine 5, SULFATE ION
Authors:Chen, Y.C, Li, K.M, Chen, P.J, Zarivach, R, Sun, Y.J, Sue, S.C.
Deposit date:2018-08-07
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Integrative Model to Coordinate the Oligomerization and Aggregation Mechanisms of CCL5.
J.Mol.Biol., 432, 2020
7DUT
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BU of 7dut by Molmil
Structure of Sulfolobus solfataricus SegA protein
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SOJ protein (Soj)
Authors:Yen, C.Y, Lin, M.G, Hsiao, C.D, Sun, Y.J.
Deposit date:2021-01-11
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Chromosome segregation in Archaea: SegA- and SegB-DNA complex structures provide insights into segrosome assembly.
Nucleic Acids Res., 49, 2021
7DUV
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BU of 7duv by Molmil
Structure of Sulfolobus solfataricus SegB protein
Descriptor: SULFATE ION, SegB
Authors:Yen, C.Y, Lin, M.G, Sun, Y.J, Hsiao, C.D.
Deposit date:2021-01-11
Release date:2021-12-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Chromosome segregation in Archaea: SegA- and SegB-DNA complex structures provide insights into segrosome assembly.
Nucleic Acids Res., 49, 2021
7DV2
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BU of 7dv2 by Molmil
Structure of Sulfolobus solfataricus SegB-DNA complex
Descriptor: DNA (5'-D(P*AP*CP*GP*TP*AP*GP*AP*AP*GP*AP*GP*TP*CP*TP*AP*GP*AP*CP*TP*G)-3'), DNA (5'-D(P*CP*AP*GP*TP*CP*TP*AP*GP*AP*CP*TP*CP*TP*TP*CP*TP*AP*CP*GP*TP*A)-3'), SegB
Authors:Yen, C.Y, Lin, M.G, Sun, Y.J, Hsiao, C.D.
Deposit date:2021-01-12
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Chromosome segregation in Archaea: SegA- and SegB-DNA complex structures provide insights into segrosome assembly.
Nucleic Acids Res., 49, 2021
7DV3
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BU of 7dv3 by Molmil
Structure of Sulfolobus solfataricus SegA-AMPPNP protein
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SOJ protein (Soj)
Authors:Yen, C.Y, Lin, M.G, Wu, C.T, Hsiao, C.D, Sun, Y.J.
Deposit date:2021-01-12
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Chromosome segregation in Archaea: SegA- and SegB-DNA complex structures provide insights into segrosome assembly.
Nucleic Acids Res., 49, 2021
7DWR
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BU of 7dwr by Molmil
Structure of Sulfolobus solfataricus SegA-ADP complex bound to DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3'), DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3'), ...
Authors:Yen, C.Y, Lin, M.G, Hsiao, C.D, Sun, Y.J.
Deposit date:2021-01-17
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Chromosome segregation in Archaea: SegA- and SegB-DNA complex structures provide insights into segrosome assembly.
Nucleic Acids Res., 49, 2021
7YJW
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BU of 7yjw by Molmil
Structure of Leptospira santarosai serovar shermani LRR protein LSS01692
Descriptor: Membrane protein
Authors:Wu, C.T, Hsu, S.H, Yang, C.W, Sun, Y.J.
Deposit date:2022-07-20
Release date:2023-06-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of Leptospira LSS_01692 reveals a dimeric structure and induces inflammatory responses through Toll-like receptor 2-dependent NF-kappa B and MAPK signal transduction pathways.
Febs J., 290, 2023
7JL6
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BU of 7jl6 by Molmil
Heme binding to SrrB PAS domain plays a role in redox regulation of S. aureus SrrAB two-component system
Descriptor: Sensor protein SrrB
Authors:Tiwari, N, Sun, Y.J, Gakhar, L, Fuentes, E.J.
Deposit date:2020-07-29
Release date:2021-08-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Heme binding to SrrB PAS domain plays a role in redox regulation of S. aureus SrrAB two-component system
To Be Published
7DRB
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BU of 7drb by Molmil
Crystal structure of plant receptor like protein RXEG1 with xyloglucanase XEG1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cell 12A endoglucanase, ...
Authors:Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J.
Deposit date:2020-12-27
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Plant receptor-like protein activation by a microbial glycoside hydrolase.
Nature, 610, 2022
7DRC
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BU of 7drc by Molmil
Cryo-EM structure of plant receptor like protein RXEG1 in complex with xyloglucanase XEG1 and BAK1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Brassinosteroid insensitive 1-associated receptor kinase 1, ...
Authors:Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J.
Deposit date:2020-12-27
Release date:2022-06-22
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Plant receptor-like protein activation by a microbial glycoside hydrolase.
Nature, 610, 2022
7W3X
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BU of 7w3x by Molmil
Cryo-EM structure of plant receptor like protein RXEG1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Membrane-localized LRR receptor-like protein, ...
Authors:Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J.
Deposit date:2021-11-26
Release date:2022-06-22
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Plant receptor-like protein activation by a microbial glycoside hydrolase.
Nature, 610, 2022
7W3V
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BU of 7w3v by Molmil
Plant receptor like protein RXEG1 in complex with xyloglucanase XEG1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cell 12A endoglucanase, ...
Authors:Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J.
Deposit date:2021-11-26
Release date:2022-06-22
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Plant receptor-like protein activation by a microbial glycoside hydrolase.
Nature, 610, 2022
7W3T
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BU of 7w3t by Molmil
Cryo-EM structure of plant receptor like kinase NbBAK1 in RXEG1-BAK1-XEG1 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Brassinosteroid insensitive 1-associated receptor kinase 1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J.
Deposit date:2021-11-26
Release date:2022-06-22
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Plant receptor-like protein activation by a microbial glycoside hydrolase.
Nature, 610, 2022
6UCH
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BU of 6uch by Molmil
SMARCB1 nucleosome-interacting C-terminal alpha helix
Descriptor: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Authors:Valencia, A.M, Sun, Z.Y.J, Seo, H.S, Vangos, H.S, Yeoh, Z.C, Mashtalir, N, Dhe-Paganon, S, Kadoch, C.
Deposit date:2019-09-16
Release date:2019-11-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Recurrent SMARCB1 Mutations Reveal a Nucleosome Acidic Patch Interaction Site That Potentiates mSWI/SNF Complex Chromatin Remodeling.
Cell, 179, 2019
1P4Q
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BU of 1p4q by Molmil
Solution structure of the CITED2 transactivation domain in complex with the p300 CH1 domain
Descriptor: Cbp/p300-interacting transactivator 2, E1A-associated protein p300, ZINC ION
Authors:Freedman, S.J, Sun, Z.-Y.J, Kung, A.L, France, D.S, Wagner, G, Eck, M.J.
Deposit date:2003-04-23
Release date:2003-07-01
Last modified:2017-02-01
Method:SOLUTION NMR
Cite:Structural basis for negative regulation of hypoxia-inducible factor-1alpha by CITED2.
Nat.Struct.Biol., 10, 2003
2AEN
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BU of 2aen by Molmil
Crystal structure of the rotavirus strain DS-1 VP8* core
Descriptor: ETHANOL, GLYCEROL, Outer capsid protein VP4, ...
Authors:Monnier, N, Higo-Moriguchi, K, Sun, Z.-Y.J, Prasad, B.V.V, Taniguchi, K, Dormitzer, P.R.
Deposit date:2005-07-22
Release date:2006-02-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.604 Å)
Cite:High-resolution molecular and antigen structure of the VP8* core of a sialic acid-independent human rotavirus strain
J.Virol., 80, 2006
1Z9E
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BU of 1z9e by Molmil
Solution structure of the HIV-1 integrase-binding domain in LEDGF/p75
Descriptor: PC4 and SFRS1 interacting protein 2
Authors:Cherepanov, P, Sun, Z.-Y.J, Rahman, S, Maertens, G, Wagner, G, Engelman, A.
Deposit date:2005-04-01
Release date:2005-05-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the HIV-1 integrase-binding domain in LEDGF/p75
Nat.Struct.Mol.Biol., 12, 2005

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