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PDB: 196 件

6L49
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H3-CA-H3 tri-nucleosome with the 22 base-pair linker DNA
分子名称: DNA (485-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Takizawa, Y, Ho, C.-H, Tachiwana, H, Matsunami, H, Ohi, M, Wolf, M, Kurumizaka, H.
登録日2019-10-16
公開日2019-12-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (18.9 Å)
主引用文献Cryo-EM Structures of Centromeric Tri-nucleosomes Containing a Central CENP-A Nucleosome.
Structure, 28, 2020
6L4A
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H3-H3-H3 tri-nucleosome with the 22 base-pair linker DNA
分子名称: DNA (485-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Takizawa, Y, Ho, C.-H, Tachiwana, H, Matsunami, H, Ohi, M, Wolf, M, Kurumizaka, H.
登録日2019-10-16
公開日2019-12-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (12.3 Å)
主引用文献Cryo-EM Structures of Centromeric Tri-nucleosomes Containing a Central CENP-A Nucleosome.
Structure, 28, 2020
8F3K
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BU of 8f3k by Molmil
Anti-CRISPR protein AcrIIC5 inhibits CRISPR-Cas9 by acting as a DNA mimic
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACRIIC5Nch, AMMONIUM ION, ...
著者Shah, M, Sungwon, H, Davidson, A.R, Maxwell, K.L, Moraes, T.F.
登録日2022-11-10
公開日2023-03-08
最終更新日2023-04-12
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Anti-CRISPR Protein AcrIIC5 Inhibits CRISPR-Cas9 by Occupying the Target DNA Binding Pocket.
J.Mol.Biol., 435, 2023
1YOA
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BU of 1yoa by Molmil
Crystal structure of a probable flavoprotein from Thermus thermophilus HB8
分子名称: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, putative flavoprotein
著者Imagawa, T, Tsuge, H, Sugimoto, Y, Utsunomiya, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-27
公開日2005-07-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a flavoenzyme TTHA0420 from Thermus thermophilus HB8
To be published
2CTZ
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BU of 2ctz by Molmil
Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8
分子名称: O-acetyl-L-homoserine sulfhydrylase, PYRIDOXAL-5'-PHOSPHATE
著者Imagawa, T, Kousumi, Y, Tsuge, H, Utsunomiya, H, Ebihara, A, Nakagawa, N, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-24
公開日2005-11-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8
To be Published
7VFE
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BU of 7vfe by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13 with N-terminal polyhistidine tag
分子名称: Scaffold protein D13
著者Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
登録日2021-09-13
公開日2022-02-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFH
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Cryo-EM structure of Vaccinia virus scaffolding protein D13 trimer sextet
分子名称: Scaffold protein D13
著者Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
登録日2021-09-13
公開日2022-02-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFD
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BU of 7vfd by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13
分子名称: Scaffold protein D13
著者Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
登録日2021-09-13
公開日2022-02-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.25 Å)
主引用文献Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFF
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Cryo-EM structure of Vaccinia virus scaffolding protein D13 with N-terminal 17 residue truncation
分子名称: Scaffold protein D13
著者Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
登録日2021-09-13
公開日2022-02-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFG
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BU of 7vfg by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13 trimer doublet
分子名称: Scaffold protein D13
著者Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
登録日2021-09-13
公開日2022-02-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
2CB1
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BU of 2cb1 by Molmil
Crystal Structure of O-actetyl Homoserine Sulfhydrylase From Thermus Thermophilus HB8,OAH2.
分子名称: O-ACETYL HOMOSERINE SULFHYDRYLASE, PYRIDOXAL-5'-PHOSPHATE
著者Imagawa, T, Utsunomiya, H, Tsuge, H, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Agari, Y, Kuramitsu, S, Yokoyama, S.
登録日2005-12-28
公開日2007-01-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Crystal Structure of O-Acetyl Homoserine Sulfhydrylase
To be Published
2BGZ
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BU of 2bgz by Molmil
ATOMIC MODEL OF THE BACTERIAL FLAGELLAR BASED ON DOCKING AN X-RAY DERIVED HOOK STRUCTURE INTO AN EM MAP.
分子名称: FLAGELLAR HOOK PROTEIN FLGE
著者Shaikh, T.R, Thomas, D.R, Chen, J.Z, Samatey, F.A, Matsunami, H, Imada, K, Namba, K, Derosier, D.J.
登録日2005-01-06
公開日2005-01-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献A Partial Atomic Structure for the Flagellar Hook of Salmonella Typhimurium.
Proc.Natl.Acad.Sci.USA, 102, 2005
2BGY
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BU of 2bgy by Molmil
Fit of the x-ray structure of the baterial flagellar hook fragment flge31 into an EM map from the hook of Caulobacter crescentus.
分子名称: FLAGELLAR HOOK PROTEIN FLGE
著者Shaikh, T.R, Thomas, D.R, Chen, J.Z, Samatey, F.A, Matsunami, H, Imada, K, Namba, K, DeRosier, D.J.
登録日2005-01-06
公開日2005-01-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献A Partial Atomic Structure for the Flagellar Hook of Salmonella Typhimurium.
Proc.Natl.Acad.Sci.USA, 102, 2005
6JZT
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BU of 6jzt by Molmil
Structure of the bacterial flagellar hook from Salmonella typhimurium
分子名称: Flagellar hook protein FlgE
著者Saijo-Hamano, Y, Matsunami, H, Namba, K, Imada, K.
登録日2019-05-03
公開日2019-07-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7.1 Å)
主引用文献Architecture of the Bacterial Flagellar Distal Rod and Hook ofSalmonella.
Biomolecules, 9, 2019
6K3I
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BU of 6k3i by Molmil
Salmonella hook in curved state - 66 subunit models
分子名称: Flagellar hook protein FlgE
著者Shibata, S, Matsunami, H, Wolf, M, Aizawa, S.
登録日2019-05-19
公開日2019-10-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Torque transmission mechanism of the curved bacterial flagellar hook revealed by cryo-EM.
Nat.Struct.Mol.Biol., 26, 2019
6JZR
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BU of 6jzr by Molmil
Structure of the bacterial flagellar polyrod
分子名称: Flagellar basal-body rod protein FlgG
著者Saijo-Hamano, Y, Matsunami, H, Namba, K, Imada, K.
登録日2019-05-03
公開日2019-07-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Architecture of the Bacterial Flagellar Distal Rod and Hook ofSalmonella.
Biomolecules, 9, 2019
6KMF
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BU of 6kmf by Molmil
FimA type V pilus from P.gingivalis
分子名称: Major fimbrium subunit FimA type-1
著者Shibata, S, Shoji, M, Matsunami, H, Matthews, M, Imada, K, Nakayama, K, Wolf, M.
登録日2019-07-31
公開日2020-04-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of polymerized type V pilin reveals assembly mechanism involving protease-mediated strand exchange.
Nat Microbiol, 5, 2020
6JF2
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BU of 6jf2 by Molmil
Crystal structure of a 20kDa fragment of FlgG
分子名称: Flagellar basal-body rod protein FlgG
著者Saijo-Hamano, Y, Matsunami, H, Namba, K, Imada, K.
登録日2019-02-08
公開日2019-07-17
最終更新日2020-10-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Architecture of the Bacterial Flagellar Distal Rod and Hook of Salmonella .
Biomolecules, 9, 2019
5Z9W
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BU of 5z9w by Molmil
Ebola virus nucleoprotein-RNA complex
分子名称: Ebolavirus nucleoprotein (residues 19-406), RNA (6-MER)
著者Sugita, Y, Matsunami, H, Kawaoka, Y, Noda, T, Wolf, M.
登録日2018-02-05
公開日2018-10-24
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of the Ebola virus nucleoprotein-RNA complex at 3.6 angstrom resolution.
Nature, 563, 2018
2D4Y
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BU of 2d4y by Molmil
Crystal structure of a 49K fragment of HAP1 (FlgK)
分子名称: Flagellar hook-associated protein 1
著者Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
登録日2005-10-25
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the bacterial flagellar hook-filament junction
To be Published
2D4X
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BU of 2d4x by Molmil
Crystal structure of a 26K fragment of HAP3 (FlgL)
分子名称: Flagellar hook-associated protein 3
著者Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
登録日2005-10-25
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the bacterial flagellar hook-filament junction
To be Published

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