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PDB: 90 results

5EMC
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BU of 5emc by Molmil
Transcription factor GRDBD and smGRE complex
Descriptor: DNA (5'-D(*CP*CP*AP*GP*AP*AP*(5CM)P*AP*TP*CP*AP*TP*GP*TP*TP*(5CM)P*TP*G)-3'), DNA (5'-D(*CP*CP*AP*GP*AP*AP*(5CM)P*AP*TP*GP*AP*TP*GP*TP*TP*(5CM)P*TP*G)-3'), Glucocorticoid receptor, ...
Authors:Su, X.D, Lian, T, Jin, J.
Deposit date:2015-11-06
Release date:2016-06-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The effects of cytosine methylation on general transcription factors
To Be Published
2PER
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BU of 2per by Molmil
Crystal Structure of Human Chloride Intracellular Channel protein 2
Descriptor: 5-MERCAPTO-2-NITRO-BENZOIC ACID, Chloride intracellular channel protein 2
Authors:Su, X.D, Liang, Y.H, Mi, W.
Deposit date:2007-04-03
Release date:2008-03-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of human chloride intracellular channel protein 2: A disulfide bond with functional implications.
Proteins, 71, 2008
3V8V
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BU of 3v8v by Molmil
Crystal structure of bifunctional methyltransferase YcbY (RlmLK) from Escherichia coli, SAM binding
Descriptor: 6-O-octanoyl-beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, Ribosomal RNA large subunit methyltransferase L, S-ADENOSYLMETHIONINE
Authors:Su, X.D, Wang, K.T.
Deposit date:2011-12-23
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the bifunctional methyltransferase YcbY (RlmKL) that adds the m7G2069 and m2G2445 modifications in Escherichia coli 23S rRNA
Nucleic Acids Res., 40, 2012
3V97
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BU of 3v97 by Molmil
Crystal structure of bifunctional methyltransferase YcbY (RlmLK) from Escherichia coli, SAH binding
Descriptor: 6-O-octanoyl-beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, GLYCEROL, Ribosomal RNA large subunit methyltransferase L, ...
Authors:Su, X.D, Wang, K.T.
Deposit date:2011-12-23
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the bifunctional methyltransferase YcbY (RlmKL) that adds the m7G2069 and m2G2445 modifications in Escherichia coli 23S rRNA
Nucleic Acids Res., 40, 2012
5XNL
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BU of 5xnl by Molmil
Structure of stacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
5XNN
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BU of 5xnn by Molmil
Structure of M-LHCII and CP24 complexes in the stacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
5XNM
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BU of 5xnm by Molmil
Structure of unstacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2019-05-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
5XNO
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BU of 5xno by Molmil
Structure of M-LHCII and CP24 complexes in the unstacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
3BR8
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BU of 3br8 by Molmil
Crystal structure of acylphosphatase from Bacillus subtilis
Descriptor: GLYCEROL, PHOSPHATE ION, Probable acylphosphatase
Authors:Li, D, Hu, J.C, Xia, B, Su, X.D.
Deposit date:2007-12-21
Release date:2008-06-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Conformational Transitions Revealed by Structures of Acylphosphatase from Bacillus subtilis in Different States
to be published
2RI1
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BU of 2ri1 by Molmil
Crystal Structure of glucosamine 6-phosphate deaminase (NagB) with GlcN6P from S. mutans
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, Glucosamine-6-phosphate deaminase
Authors:Liu, C, Li, D, Su, X.D.
Deposit date:2007-10-10
Release date:2008-03-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Ring-opening mechanism revealed by crystal structures of NagB and its ES intermediate complex
J.Mol.Biol., 379, 2008
2RI0
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BU of 2ri0 by Molmil
Crystal Structure of glucosamine 6-phosphate deaminase (NagB) from S. mutans
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glucosamine-6-phosphate deaminase, SODIUM ION
Authors:Li, D, Liu, C, Li, L.F, Su, X.D.
Deposit date:2007-10-10
Release date:2008-03-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ring-opening mechanism revealed by crystal structures of NagB and its ES intermediate complex
J.Mol.Biol., 379, 2008
1RKB
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BU of 1rkb by Molmil
The structure of adrenal gland protein AD-004
Descriptor: LITHIUM ION, Protein AD-004, SULFATE ION
Authors:Ren, H, Liang, Y, Bennett, M, Su, X.D.
Deposit date:2003-11-21
Release date:2005-01-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of human adenylate kinase 6: An adenylate kinase localized to the cell nucleus
Proc.Natl.Acad.Sci.Usa, 102, 2005
1ROA
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BU of 1roa by Molmil
Structure of human cystatin D
Descriptor: Cystatin D
Authors:Alvarez-Fernandez, M, Liang, Y.H, Abrahamson, M, Su, X.D.
Deposit date:2003-12-01
Release date:2004-05-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human cystatin D, a cysteine peptidase inhibitor with restricted inhibition profile.
J.Biol.Chem., 280, 2005
1RN7
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BU of 1rn7 by Molmil
Structure of human cystatin D
Descriptor: Cystatin D
Authors:Alvarez-Fernandez, M, Liang, Y.H, Abrahamson, M, Su, X.D.
Deposit date:2003-11-30
Release date:2004-05-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human cystatin D, a cysteine peptidase inhibitor with restricted inhibition profile.
J.Biol.Chem., 280, 2005
1R3U
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BU of 1r3u by Molmil
Crystal Structure of Hypoxanthine-Guanine Phosphoribosyltransferase from Thermoanaerobacter tengcongensis
Descriptor: ACETATE ION, Hypoxanthine-guanine phosphoribosyltransferase, MAGNESIUM ION
Authors:Chen, Q, Liang, Y.H, Gu, X.C, Luo, M, Su, X.D.
Deposit date:2003-10-03
Release date:2004-10-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Hypoxanthine-Guanine Phosphoribosyltransferase from Thermoanaerobacter tengcongensis
To be published
1KTV
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BU of 1ktv by Molmil
Crystal Structure of Elongation Factor G Dimer Without Nucleotide
Descriptor: ELONGATION FACTOR G
Authors:Laurberg, M, Kristensen, O, Su, X.D, Liljas, A.
Deposit date:2002-01-17
Release date:2003-12-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:A New Crystal Form of Thermus thermophilus Elongation Factor G Indicates Crystallographic Limitations Imposed on Molecular Flexibility
To be Published
3BGK
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BU of 3bgk by Molmil
The crystal structure of hypothetic protein SMU.573 from Streptococcus mutans
Descriptor: PHOSPHATE ION, POTASSIUM ION, Putative uncharacterized protein
Authors:Liang, Y.H, Zhou, Y.F, Yang, C, Su, X.D.
Deposit date:2007-11-26
Release date:2008-12-16
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of Streptococcus mutans protein SMU.573 solved from the anomalous signal measured with in-house chromium radiation
To be Published
3H6X
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BU of 3h6x by Molmil
Crystal structure of dUTPase from Streptococcus mutans
Descriptor: dUTPase
Authors:Li, G.L, Wang, K.T, Liu, X, Li, L.F, Su, X.D.
Deposit date:2009-04-24
Release date:2010-05-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and activity analysis of dUTP nucleotidohydrolase from Streptococcus mutans
To be Published
3JCU
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BU of 3jcu by Molmil
Cryo-EM structure of spinach PSII-LHCII supercomplex at 3.2 Angstrom resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Wei, X.P, Zhang, X.Z, Su, X.D, Cao, P, Liu, X.Y, Li, M, Chang, W.R, Liu, Z.F.
Deposit date:2016-03-10
Release date:2016-05-25
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of spinach photosystem II-LHCII supercomplex at 3.2 A resolution
Nature, 534, 2016
2D4G
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BU of 2d4g by Molmil
Structure of YjcG protein, a putative 2'-5' RNA ligase from Bacillus subtilis
Descriptor: hypothetical protein BSU11850
Authors:Li, D, Liang, Y.H, Su, X.D.
Deposit date:2005-10-19
Release date:2006-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of B. subtilis YjcG characterizing the YjcG-like group of 2H phosphoesterase superfamily.
Proteins, 72, 2008
2BB0
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BU of 2bb0 by Molmil
Structure of Imidazolonepropionase from Bacillus subtilis
Descriptor: ACETATE ION, Imidazolonepropionase, ZINC ION
Authors:Liang, Y.H, Yu, Y, Su, X.D.
Deposit date:2005-10-16
Release date:2006-09-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A catalytic mechanism revealed by the crystal structures of the imidazolonepropionase from Bacillus subtilis
J.Biol.Chem., 281, 2006
2B78
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BU of 2b78 by Molmil
A putative sam-dependent methyltransferase from Streptococcus mutans
Descriptor: hypothetical protein SMU.776
Authors:Nan, J, Wang, K.T, Su, X.D.
Deposit date:2005-10-03
Release date:2006-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A putative sam-dependent methyltransferase from Streptococcus mutans
To be Published
2AYD
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BU of 2ayd by Molmil
Crystal Structure of the C-terminal WRKY domainof AtWRKY1, an SA-induced and partially NPR1-dependent transcription factor
Descriptor: SUCCINIC ACID, WRKY transcription factor 1, ZINC ION
Authors:Duan, M.R, Nan, J, Li, Y, Su, X.D.
Deposit date:2005-09-07
Release date:2006-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DNA binding mechanism revealed by high resolution crystal structure of Arabidopsis thaliana WRKY1 protein.
Nucleic Acids Res., 35, 2007
5GS5
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BU of 5gs5 by Molmil
Crystal structure of apo rat STING
Descriptor: SULFATE ION, Stimulator of interferon genes protein
Authors:Zhang, H, Han, M.J, Tao, J.L, Ye, Z.Y, Du, X.X, Deng, M.J, Zhang, X.Y, Li, L.F, Jiang, Z.F, Su, X.D.
Deposit date:2016-08-13
Release date:2017-10-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of apo ratSTING
To Be Published
5GRM
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BU of 5grm by Molmil
Crystal structure of rat STING in complex with cyclic GMP-AMP with 2'5'and 3'5'phosphodiester linkage(2'3'-cGAMP)
Descriptor: Stimulator of interferon genes protein, cGAMP
Authors:Zhang, H, Han, M.J, Tao, J.L, Ye, Z.Y, Du, X.X, Deng, M.J, Zhang, X.Y, Li, L.F, Jiang, Z.F, Su, X.D.
Deposit date:2016-08-11
Release date:2017-10-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of rat STING in complex with cyclic GMP-AMP with 2'5'and 3'5'phosphodiester linkage(2'3'-cGAMP)
To Be Published

 

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数据于2024-10-30公开中

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