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PDB: 11 results

9QDP
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BU of 9qdp by Molmil
De novo designed enzyme for Morita-Baylis-Hillman reaction MBH2
Descriptor: De novo designed enzyme for Morita-Baylis-Hillman reaction MBH2, SODIUM ION, TRIETHYLENE GLYCOL
Authors:Tripp, A, Stoll, D, Oberdorfer, G, Fischer, C, Kaltenbrunner, S.
Deposit date:2025-03-06
Release date:2025-12-10
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Computational enzyme design by catalytic motif scaffolding.
Nature, 2025
9FW5
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Retroaldolase 17 (RAD17)
Descriptor: NONAETHYLENE GLYCOL, Retroaldolase 17 (RAD17)
Authors:Bijelic, A, Braun, M, Stoll, D, Tripp, A, Chakatok, M, Oberdorfer, G.
Deposit date:2024-06-28
Release date:2025-07-09
Last modified:2025-12-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Computational enzyme design by catalytic motif scaffolding.
Nature, 2025
9FW7
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BU of 9fw7 by Molmil
Retroaldolase 32 (RAD32)
Descriptor: Retroaldolase 32 (RAD32)
Authors:Bijelic, A, Braun, M, Stoll, D, Tripp, A, Chakatok, M, Oberdorfer, G.
Deposit date:2024-06-28
Release date:2025-07-09
Last modified:2025-12-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Computational enzyme design by catalytic motif scaffolding.
Nature, 2025
9FWA
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BU of 9fwa by Molmil
Retroaldolase 36 (RAD36)
Descriptor: 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL, MAGNESIUM ION, Retroaldolase 36 (RAD36)
Authors:Bijelic, A, Braun, M, Stoll, D, Tripp, A, Chakatok, M, Oberdorfer, G.
Deposit date:2024-06-28
Release date:2025-07-09
Last modified:2025-12-17
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Computational enzyme design by catalytic motif scaffolding.
Nature, 2025
9GBT
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BU of 9gbt by Molmil
De novo designed retro-aldolase 13 (RAD13)
Descriptor: ACETATE ION, GLYCEROL, Retroaldolase 13 (RAD13), ...
Authors:Bijelic, A, Stoll, D, Chakatok, M, Tripp, A, Braun, M, Oberdorfer, G.
Deposit date:2024-07-31
Release date:2025-08-13
Last modified:2025-12-17
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Computational enzyme design by catalytic motif scaffolding.
Nature, 2025
2BVT
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The structure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases.
Descriptor: BETA-1,4-MANNANASE, CACODYLATE ION, beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose
Authors:Le Nours, J, Anderson, L, Stoll, D, Stalbrand, H, Lo Leggio, L.
Deposit date:2005-07-04
Release date:2005-09-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structure and Characterization of a Modular Endo-Beta-1,4-Mannanase from Cellulomonas Fimi
Biochemistry, 44, 2005
2BVY
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The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi
Descriptor: ACETATE ION, BETA-1,4-MANNANASE, CACODYLATE ION, ...
Authors:Le Nours, J, Anderson, L, Stoll, D, Stalbrand, H, Lo Leggio, L.
Deposit date:2005-07-04
Release date:2005-09-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Structure and Characterization of a Modular Endo-Beta-1,4-Mannanase from Cellulomonas Fimi
Biochemistry, 44, 2005
8R5S
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BU of 8r5s by Molmil
t113 - De-novo designed soluble homotetramer
Descriptor: chain A, B, C and H of the soluble homotetramer
Authors:Messenlehner, J, Stoll, D, Oberdorfer, G.
Deposit date:2023-11-17
Release date:2024-11-27
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:De-novo soluble homotetramer
To Be Published
8RIS
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BU of 8ris by Molmil
Computationally redesigend variant of Pyrrolysyl-tRNA Synthetase (Y306A)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PENTAETHYLENE GLYCOL, ...
Authors:Oberdorfer, G, Moser, M, Stoll, D.
Deposit date:2023-12-19
Release date:2025-01-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Computationally redesigend variant of Pyrrolysyl-tRNA Synthetase (Y306A)
To Be Published
1ODZ
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BU of 1odz by Molmil
Expansion of the glycosynthase repertoire to produce defined manno-oligosaccharides
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Mannan endo-1,4-beta-mannosidase, SODIUM ION, ...
Authors:Jahn, M, Stoll, D, Warren, R.A.J, Szabo, L, Singh, P, Gilbert, H.J, Ducros, V.M.A, Davies, G.J, Withers, S.G.
Deposit date:2003-03-17
Release date:2003-07-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Expansion of the Glycosynthase Repertoire to Produce Defined Manno-Oligosaccharides
Chem.Commun.(Camb.), 12, 2003
8P0Z
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BU of 8p0z by Molmil
AP01-S2.3 - a variant of a redesigned transferrin receptor apical domain
Descriptor: BORIC ACID, SODIUM ION, Transferrin receptor protein 1, ...
Authors:Oberdorfer, G, Grill, B, Bjelic, S, Stoll, D.
Deposit date:2023-05-11
Release date:2023-09-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Affinity Maturated Transferrin Receptor Apical Domain Blocks Machupo Virus Glycoprotein Binding.
J.Mol.Biol., 435, 2023

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PDB entries from 2025-12-24

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