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PDB: 174 results

5ARA
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Bovine mitochondrial ATP synthase state 1a
Descriptor: ATP SYNTHASE F(0) COMPLEX SUBUNIT B1, MITOCHONDRIAL, ATP SYNTHASE F(0) COMPLEX SUBUNIT C1, ...
Authors:Zhou, A, Rohou, A, Schep, D.G, Bason, J.V, Montgomery, M.G, Walker, J.E, Grigorieff, N, Rubinstein, J.L.
Deposit date:2015-09-24
Release date:2015-10-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Structure and conformational states of the bovine mitochondrial ATP synthase by cryo-EM.
Elife, 4, 2015
6VQ6
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BU of 6vq6 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 1 bound to ADP and SidK (built from focused refinement models)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
5ARI
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BU of 5ari by Molmil
Bovine mitochondrial ATP synthase state 2b
Descriptor: ATP SYNTHASE F(0) COMPLEX SUBUNIT B1, MITOCHONDRIAL, ATP SYNTHASE F(0) COMPLEX SUBUNIT C1, ...
Authors:Zhou, A, Rohou, A, Schep, D.G, Bason, J.V, Montgomery, M.G, Walker, J.E, Grigorieff, N, Rubinstein, J.L.
Deposit date:2015-09-24
Release date:2015-10-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Structure and conformational states of the bovine mitochondrial ATP synthase by cryo-EM.
Elife, 4, 2015
6VQG
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BU of 6vqg by Molmil
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 2 (from focused refinement)
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-05
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
5I1M
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BU of 5i1m by Molmil
Yeast V-ATPase average of densities, a subunit segment
Descriptor: V-type proton ATPase subunit a, vacuolar isoform
Authors:Schep, D.G, Zhao, J, Rubinstein, J.L.
Deposit date:2016-02-05
Release date:2016-03-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.
Proc.Natl.Acad.Sci.USA, 113, 2016
6VQC
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BU of 6vqc by Molmil
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 1 (from focused refinement)
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ8
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BU of 6vq8 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 3 bound to ADP and SidK (built from focused refinement models)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQH
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BU of 6vqh by Molmil
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 3 (from focused refinement)
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-05
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ9
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BU of 6vq9 by Molmil
Mammalian V-ATPase from rat brain soluble V1 region rotational state 1 with SidK and ADP (from focused refinement)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
5ARE
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BU of 5are by Molmil
Bovine mitochondrial ATP synthase state 1b
Descriptor: ATP SYNTHASE F(0) COMPLEX SUBUNIT B1, MITOCHONDRIAL, ATP SYNTHASE F(0) COMPLEX SUBUNIT C1, ...
Authors:Zhou, A, Rohou, A, Schep, D.G, Bason, J.V, Montgomery, M.G, Walker, J.E, Grigorieff, N, Rubinstein, J.L.
Deposit date:2015-09-24
Release date:2015-10-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Structure and conformational states of the bovine mitochondrial ATP synthase by cryo-EM.
Elife, 4, 2015
6WXB
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BU of 6wxb by Molmil
Cryo-EM Structure of Influenza Hemagglutinin (HA) Trimer Vitrified Using Back-it-up
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, beta-D-mannopyranose
Authors:Tan, Y.Z, Rubinstein, J.L.
Deposit date:2020-05-10
Release date:2020-05-20
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Through-grid wicking enables high-speed cryoEM specimen preparation.
Acta Crystallogr D Struct Biol, 76, 2020
6VQK
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BU of 6vqk by Molmil
Mammalian V-ATPase from rat brain collar and peripheral stalks rotational state 3 (from focused refinement)
Descriptor: V-type proton ATPase 116 kDa subunit a isoform 1, V-type proton ATPase subunit C 1, V-type proton ATPase subunit E 1, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-05
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6WTS
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BU of 6wts by Molmil
CryoEM structure of the C. sordellii lethal toxin TcsL in complex with SEMA6A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SEMA6A, ...
Authors:Kucharska, I, Rubinstein, J.L, Julien, J.P.
Deposit date:2020-05-03
Release date:2020-07-08
Last modified:2020-08-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Recognition of Semaphorin Proteins by P. sordellii Lethal Toxin Reveals Principles of Receptor Specificity in Clostridial Toxins.
Cell, 182, 2020
6WX6
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BU of 6wx6 by Molmil
Cryo-EM Structure of Human Apoferritin Light Chain Vitrified Using Back-it-up
Descriptor: CALCIUM ION, Ferritin light chain
Authors:Tan, Y.Z, Rubinstein, J.L.
Deposit date:2020-05-09
Release date:2020-05-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2 Å)
Cite:Through-grid wicking enables high-speed cryoEM specimen preparation.
Acta Crystallogr D Struct Biol, 76, 2020
9B8O
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BU of 9b8o by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, Vo
Descriptor: (7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9B8Q
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BU of 9b8q by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, peripheral stalks
Descriptor: V-type proton ATPase 116 kDa subunit a isoform 1, V-type proton ATPase subunit C 1, V-type proton ATPase subunit E 1, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BRB
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BU of 9brb by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 1
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-05-11
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BRD
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BU of 9brd by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3
Descriptor: (7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-05-11
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BRC
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BU of 9brc by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 2
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-05-11
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9B8P
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BU of 9b8p by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, V1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit D, H(+)-transporting two-sector ATPase, ...
Authors:Coupland, E.M, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-07-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
3J9V
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BU of 3j9v by Molmil
Yeast V-ATPase state 3
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Zhao, J, Benlekbir, S, Rubinstein, J.L.
Deposit date:2015-02-23
Release date:2015-05-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.3 Å)
Cite:Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
3J9U
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BU of 3j9u by Molmil
Yeast V-ATPase state 2
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Zhao, J, Benlekbir, S, Rubinstein, J.L.
Deposit date:2015-02-23
Release date:2015-05-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
6B8H
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BU of 6b8h by Molmil
Mosaic model of yeast mitochondrial ATP synthase monomer
Descriptor: AATP synthase subunit g, ATP synthase catalytic sector F1 epsilon subunit, ATP synthase protein 8, ...
Authors:Guo, H, Bueler, S.A, Rubinstein, J.L.
Deposit date:2017-10-07
Release date:2018-01-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Atomic model for the dimeric FO region of mitochondrial ATP synthase.
Science, 358, 2017
6B2Z
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BU of 6b2z by Molmil
Cryo-EM structure of the dimeric FO region of yeast mitochondrial ATP synthase
Descriptor: ATP synthase protein 8, ATP synthase subunit a, ATP synthase subunit b, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2017-09-20
Release date:2017-11-08
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Atomic model for the dimeric FO region of mitochondrial ATP synthase.
Science, 358, 2017
6BTM
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BU of 6btm by Molmil
Structure of Alternative Complex III from Flavobacterium johnsoniae (Wild Type)
Descriptor: (2S)-3-hydroxypropane-1,2-diyl ditetradecanoate, Alternative Complex III subunit A, Alternative Complex III subunit B, ...
Authors:Sun, C, Benlekbir, S, Venkatakrishnan, P, Yuhang, W, Tajkhorshid, E, Rubinstein, J.L, Gennis, R.B.
Deposit date:2017-12-07
Release date:2018-05-09
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of the alternative complex III in a supercomplex with cytochrome oxidase.
Nature, 557, 2018

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PDB entries from 2024-10-02

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