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PDB: 174 results

7TK1
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BU of 7tk1 by Molmil
Yeast ATP synthase State 1catalytic(d) without exogenous ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKD
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BU of 7tkd by Molmil
Yeast ATP synthase State 1catalytic(h) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TK9
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BU of 7tk9 by Molmil
Yeast ATP synthase State 1catalytic(d) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
6DKF
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BU of 6dkf by Molmil
Caseinolytic protease (ClpP) from Staphylococcus aureus mutant - V7A
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Ripstein, Z.A, Vahidi, S, Kay, L.E, Rubinstein, J.L.
Deposit date:2018-05-29
Release date:2018-06-27
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Reversible inhibition of the ClpP protease via an N-terminal conformational switch.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6VGK
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BU of 6vgk by Molmil
ClpP1P2 complex from M. tuberculosis
Descriptor: ATP-dependent Clp protease proteolytic subunit 1, ATP-dependent Clp protease proteolytic subunit 2
Authors:Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-08
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VFS
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BU of 6vfs by Molmil
ClpXP from Neisseria meningitidis - Conformation A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
Authors:Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-06
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
6VFX
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BU of 6vfx by Molmil
ClpXP from Neisseria meningitidis - Conformation B
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
Authors:Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-06
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
6VGQ
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BU of 6vgq by Molmil
ClpP1P2 complex from M. tuberculosis with GLF-CMK bound to ClpP1
Descriptor: ATP-dependent Clp protease proteolytic subunit, ATP-dependent Clp protease proteolytic subunit 1, Z-Gly-leu-phe-CH2Cl
Authors:Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-08
Release date:2020-03-18
Last modified:2020-04-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VGN
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BU of 6vgn by Molmil
ClpP1P2 complex from M. tuberculosis bound to ADEP
Descriptor: ATP-dependent Clp protease proteolytic subunit, ATP-dependent Clp protease proteolytic subunit 1, R0M-WFP-ALO-PRO-YCP-ALA-MP8
Authors:Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-08
Release date:2020-03-18
Last modified:2020-04-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
7TMR
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BU of 7tmr by Molmil
V-ATPase from Saccharomyces cerevisiae, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-type proton ATPase subunit C, ...
Authors:Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L.
Deposit date:2022-01-19
Release date:2022-04-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation.
Nat.Struct.Mol.Biol., 29, 2022
7TMT
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BU of 7tmt by Molmil
V-ATPase from Saccharomyces cerevisiae, State 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ...
Authors:Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L.
Deposit date:2022-01-20
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation.
Nat.Struct.Mol.Biol., 29, 2022
7TMS
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BU of 7tms by Molmil
V-ATPase from Saccharomyces cerevisiae, State 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ...
Authors:Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L.
Deposit date:2022-01-20
Release date:2022-04-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation.
Nat.Struct.Mol.Biol., 29, 2022
7TJW
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BU of 7tjw by Molmil
Yeast ATP synthase F1 region State 1catalytic(e-h) with 10 mM ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ATP synthase subunit beta, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TJU
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BU of 7tju by Molmil
Yeast ATP synthase F1 region State 1-3binding beta_tight open without exogenous ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ATP synthase subunit beta, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TJT
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BU of 7tjt by Molmil
Yeast ATP synthase F1 region State 1-3catalytic beta_tight open without exogenous ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ATP synthase subunit beta, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TJV
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BU of 7tjv by Molmil
Yeast ATP synthase F1 region State 1catalytic(a) with 10 mM ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TJX
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BU of 7tjx by Molmil
Yeast ATP synthase F1 region State 1binding(a-d) with 10 mM ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TJS
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BU of 7tjs by Molmil
Yeast ATP synthase F1 region State 1-3catalytic beta_tight closed without exogenous ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKM
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BU of 7tkm by Molmil
Yeast ATP synthase State 3binding(b) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7UW9
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BU of 7uw9 by Molmil
Citrus V-ATPase State 1, H in contact with subunit a
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWB
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BU of 7uwb by Molmil
Citrus V-ATPase State 2, Highest-Resolution Class
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWA
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BU of 7uwa by Molmil
Citrus V-ATPase State 1, H in contact with subunits AB
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Abdelaziz, R.A, Keon, K.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWD
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BU of 7uwd by Molmil
Citrus V-ATPase State 2, H in contact with subunits AB
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit, V-type proton ATPase subunit AP1 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWC
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BU of 7uwc by Molmil
Citrus V-ATPase State 2, H in contact with subunit a
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UZK
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BU of 7uzk by Molmil
Rat Kidney V1 complex lacking subunit H with SidK and NCOA7B, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of V-ATPase with NCOA7B
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PDB entries from 2024-07-24

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