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PDB: 109 results
1HX1
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BU of 1hx1 by Molmil
CRYSTAL STRUCTURE OF A BAG DOMAIN IN COMPLEX WITH THE HSC70 ATPASE DOMAIN
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BAG family molecular chaperone regulator 1, Heat shock 70 kDa protein 8
Authors:Sondermann, H, Scheufler, C, Moarefi, I.
Deposit date:2001-01-11
Release date:2001-03-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a Bag/Hsc70 complex: convergent functional evolution of Hsp70 nucleotide exchange factors.
Science, 291, 2001
1Q9C
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BU of 1q9c by Molmil
Crystal Structure of the Histone domain of Son of Sevenless
Descriptor: Son of sevenless protein
Authors:Sondermann, H, Soisson, S.M, Bar-Sagi, D, Kuriyan, J.
Deposit date:2003-08-24
Release date:2003-12-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Tandem Histone Folds in the Structure of the N-terminal Segment of the Ras Activator Son of Sevenless
Structure, 11, 2003
4KKQ
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BU of 4kkq by Molmil
Crystal structure of Vibrio cholerae RbmA (crystal form 1)
Descriptor: RbmA protein
Authors:Sondermann, H, Giglio, K.M.
Deposit date:2013-05-06
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural Basis for Biofilm Formation via the Vibrio cholerae Matrix Protein RbmA.
J.Bacteriol., 195, 2013
4KKR
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BU of 4kkr by Molmil
Crystal structure of Vibrio cholerae RbmA (crystal form 3)
Descriptor: CHLORIDE ION, RbmA protein
Authors:Sondermann, H, Giglio, K.M.
Deposit date:2013-05-06
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Biofilm Formation via the Vibrio cholerae Matrix Protein RbmA.
J.Bacteriol., 195, 2013
4KKP
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BU of 4kkp by Molmil
Crystal structure of Vibrio cholerae RbmA (crystal form 2)
Descriptor: RbmA protein
Authors:Sondermann, H, Giglio, K.M.
Deposit date:2013-05-06
Release date:2013-05-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Biofilm Formation via the Vibrio cholerae Matrix Protein RbmA.
J.Bacteriol., 195, 2013
1XD2
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BU of 1xd2 by Molmil
Crystal Structure of a ternary Ras:SOS:Ras*GDP complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Sondermann, H, Soisson, S.M, Boykevisch, S, Yang, S.S, Bar-Sagi, D, Kuriyan, J.
Deposit date:2004-09-03
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analysis of autoinhibition in the ras activator son of sevenless.
Cell(Cambridge,Mass.), 119, 2004
1XD4
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BU of 1xd4 by Molmil
Crystal structure of the DH-PH-cat module of Son of Sevenless (SOS)
Descriptor: Son of sevenless protein homolog 1
Authors:Sondermann, H, Soisson, S.M, Boykevisch, S, Yang, S.S, Bar-Sagi, D, Kuriyan, J.
Deposit date:2004-09-03
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:Structural analysis of autoinhibition in the ras activator son of sevenless.
Cell(Cambridge,Mass.), 119, 2004
1XDV
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BU of 1xdv by Molmil
Experimentally Phased Structure of Human the Son of Sevenless protein at 4.1 Ang.
Descriptor: Son of sevenless protein homolog 1
Authors:Sondermann, H, Soisson, S.M, Boykevisch, S, Yang, S.S, Bar-Sagi, D, Kuriyan, J.
Deposit date:2004-09-08
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Structural analysis of autoinhibition in the ras activator son of sevenless.
Cell(Cambridge,Mass.), 119, 2004
3PJV
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BU of 3pjv by Molmil
Structure of Pseudomonas fluorescence LapD periplasmic domain
Descriptor: Cyclic dimeric GMP binding protein
Authors:Sondermann, H, Navarro, M.V.A.S, Chatterjee, D.
Deposit date:2010-11-10
Release date:2011-02-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7727 Å)
Cite:Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011
3PJU
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BU of 3pju by Molmil
Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Cyclic dimeric GMP binding protein
Authors:Sondermann, H, Navarro, M.V.A.S, Krasteva, P.
Deposit date:2010-11-10
Release date:2011-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4991 Å)
Cite:Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011
3PJX
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BU of 3pjx by Molmil
Structure of Pseudomonas fluorescence LapD GGDEF-EAL dual domain, P32
Descriptor: 1,2-ETHANEDIOL, Cyclic dimeric GMP binding protein
Authors:Sondermann, H, Navarro, M.V.A.S.
Deposit date:2010-11-10
Release date:2011-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.0002 Å)
Cite:Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011
3PJW
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BU of 3pjw by Molmil
Structure of Pseudomonas fluorescence LapD GGDEF-EAL dual domain, I23
Descriptor: Cyclic dimeric GMP binding protein
Authors:Sondermann, H, Navarro, M.V.A.S.
Deposit date:2010-11-10
Release date:2011-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1006 Å)
Cite:Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011
3PJT
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BU of 3pjt by Molmil
Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, C2221
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Cyclic dimeric GMP binding protein
Authors:Sondermann, H, Navarro, M.V.A.S, Krasteva, P.
Deposit date:2010-11-10
Release date:2011-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5154 Å)
Cite:Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011
3SVN
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BU of 3svn by Molmil
Crystal structure of mKate S158A mutant at pH 7.5
Descriptor: mKate
Authors:Wang, Q, Byrnes, L, Sondermann, H.
Deposit date:2011-07-12
Release date:2011-09-14
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
3SVU
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BU of 3svu by Molmil
Crystal structure of mKate mutant S143C
Descriptor: mkate S143C
Authors:Wang, Q, Byrnes, L, Sondermann, H.
Deposit date:2011-07-12
Release date:2011-09-14
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
3SVR
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BU of 3svr by Molmil
Crystal structure of mkate mutant S158A/S143C at pH 7.5
Descriptor: mkate S158A/S143C
Authors:Wang, Q, Byrnes, L, Sondermann, H.
Deposit date:2011-07-12
Release date:2011-09-14
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.907 Å)
Cite:Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
5VGR
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BU of 5vgr by Molmil
Human Atlastin-3, GDP-bound
Descriptor: Atlastin-3, GUANOSINE-5'-DIPHOSPHATE
Authors:O'Donnell, J.P, Sondermann, H.
Deposit date:2017-04-11
Release date:2017-05-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Timing and Reset Mechanism of GTP Hydrolysis-Driven Conformational Changes of Atlastin.
Structure, 25, 2017
6XJO
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BU of 6xjo by Molmil
Human atlastin-3 (residues 1-334) bound to GDP-Mg2+ exhibits an ordered amino terminus
Descriptor: Atlastin-3, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:O'Donnell, J.P, Sondermann, H.
Deposit date:2020-06-24
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The hypervariable region of atlastin-1 is a site for intrinsic and extrinsic regulation.
J.Cell Biol., 220, 2021
6XJN
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BU of 6xjn by Molmil
Human atlastin-1 (residues 1-439) bound to GDP-Mg2+ exhibits an ordered amino terminus
Descriptor: Atlastin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:O'Donnell, J.P, Sondermann, H.
Deposit date:2020-06-24
Release date:2021-06-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The hypervariable region of atlastin-1 is a site for intrinsic and extrinsic regulation.
J.Cell Biol., 220, 2021
9ETK
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BU of 9etk by Molmil
Crystal structure of Vibrio cholerae RNase AM
Descriptor: GLYCEROL, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2024-03-26
Release date:2024-09-11
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Diribonuclease activity eliminates toxic diribonucleotide accumulation.
Cell Rep, 43, 2024
6PWK
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BU of 6pwk by Molmil
Vibrio cholerae LapD S helix-GGDEF-EAL (bound to c-di-GMP)
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), GGDEF and EAL domain-containing protein, MAGNESIUM ION
Authors:Giglio, K.M, Cooley, R.B, Sondermann, H.
Deposit date:2019-07-23
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:A Conserved Regulatory Circuit Controls Large Adhesins in Vibrio cholerae.
Mbio, 10, 2019
6PWJ
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BU of 6pwj by Molmil
Vibrio cholerae LapD S helix-GGDEF-EAL (apo)
Descriptor: GGDEF and EAL domain-containing protein, MAGNESIUM ION, TRIETHYLENE GLYCOL
Authors:Giglio, K.M, Cooley, R.B, Sondermann, H.
Deposit date:2019-07-23
Release date:2019-10-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Conserved Regulatory Circuit Controls Large Adhesins in Vibrio cholerae.
Mbio, 10, 2019
3KLO
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BU of 3klo by Molmil
Vibrio cholerae VpsT bound to c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), D(-)-TARTARIC ACID, Transcriptional regulator VpsT
Authors:Krasteva, P.V, Navarro, V.A.S, Sondermann, H.
Deposit date:2009-11-08
Release date:2010-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP.
Science, 327, 2010
3KLN
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BU of 3kln by Molmil
Vibrio cholerae VpsT
Descriptor: Transcriptional regulator, LuxR family
Authors:Krasteva, P.V, Navarro, V.A.S, Sondermann, H.
Deposit date:2009-11-08
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.078 Å)
Cite:Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP.
Science, 327, 2010
9F7L
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BU of 9f7l by Molmil
Bartonella henselae NrnC bound to deoxy-pGG
Descriptor: 3'-5' exonuclease, CHLORIDE ION, DNA (5'-R(P*DGP*DG)-3'), ...
Authors:Mortensen, S, Sondermann, H.
Deposit date:2024-05-04
Release date:2024-12-04
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and bioinformatics analyses identify deoxydinucleotide-specific nucleases and their association with genomic islands in gram-positive bacteria.
Nucleic Acids Res., 53, 2025

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