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PDB: 42 件

7V8V
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Crystal structure of PsEst3 S128A mutant
分子名称: esterase
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8W
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Crystal structure of PsEst3 S128A variant complexed with malonate
分子名称: 1,2-ETHANEDIOL, ACETATE ION, MALONIC ACID, ...
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8X
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Crystal structure of PsEst3 complexed with Phenylmethylsulfonyl fluoride (PMSF)
分子名称: esterase, phenylmethanesulfonic acid
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8U
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Crystal structure of PsEst3 wild-type
分子名称: Esterase, NITROBENZENE, SULFATE ION
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
5CZY
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Crystal structure of LegAS4
分子名称: GLYCEROL, Legionella effector LegAS4, S-ADENOSYLMETHIONINE
著者Son, J, Hwang, K.Y, Lee, W.C.
登録日2015-08-01
公開日2015-09-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Legionella pneumophila type IV secretion system effector LegAS4
Biochem.Biophys.Res.Commun., 465, 2015
5ZFX
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Crystal Structure of Triosephosphate isomerase from Opisthorchis viverrini
分子名称: MAGNESIUM ION, Triosephosphate isomerase
著者Son, J, Kim, S, Kim, S.E, Lee, H, Lee, M.R, Hwang, K.Y.
登録日2018-03-07
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.751 Å)
主引用文献Structural Analysis of an Epitope Candidate of Triosephosphate Isomerase in Opisthorchis viverrini.
Sci Rep, 8, 2018
5ZG5
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Crystal Structure of Triosephosphate isomerase SADsubAAA mutant from Opisthorchis viverrini
分子名称: Triosephosphate isomerase
著者Son, J, Kim, S, Kim, S.E, Lee, H, Lee, M.R, Hwang, K.Y.
登録日2018-03-07
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.597 Å)
主引用文献Structural Analysis of an Epitope Candidate of Triosephosphate Isomerase in Opisthorchis viverrini.
Sci Rep, 8, 2018
5ZGA
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Crystal Structure of Triosephosphate isomerase SAD deletion and N115A mutant from Opisthorchis viverrini
分子名称: Triosephosphate isomerase
著者Son, J, Kim, S, Kim, S.E, Lee, H, Lee, M.R, Hwang, K.Y.
登録日2018-03-08
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.793 Å)
主引用文献Structural Analysis of an Epitope Candidate of Triosephosphate Isomerase in Opisthorchis viverrini.
Sci Rep, 8, 2018
5ZG4
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Crystal Structure of Triosephosphate isomerase SAD deletion mutant from Opisthorchis viverrini
分子名称: Triosephosphate isomerase
著者Son, J, Kim, S, Kim, S.E, Lee, H, Lee, M.R, Hwang, K.Y.
登録日2018-03-07
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.746 Å)
主引用文献Structural Analysis of an Epitope Candidate of Triosephosphate Isomerase in Opisthorchis viverrini.
Sci Rep, 8, 2018
4Y7I
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Crystal Structure of MTMR8
分子名称: Myotubularin-related protein 8, PHOSPHATE ION
著者Yoo, K, Lee, J, Son, J, Shin, W, Im, D, Heo, Y.S.
登録日2015-02-15
公開日2015-07-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Structure of the catalytic phosphatase domain of MTMR8: implications for dimerization, membrane association and reversible oxidation.
Acta Crystallogr.,Sect.D, 71, 2015
7L9C
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Receiver Domain of RssB
分子名称: Regulator of RpoS
著者Deaconescu, A.M, Son, J, Schwartz, J.
登録日2021-01-03
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Phospho-dependent signaling during the general stress response by the atypical response regulator and ClpXP adaptor RssB.
Protein Sci., 30, 2021
7LCM
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Receiver Domain of RssB bound to beryllofluoride
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Regulator of RpoS
著者Deaconescu, A.M, Schwartz, J, Son, J.
登録日2021-01-11
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Phospho-dependent signaling during the general stress response by the atypical response regulator and ClpXP adaptor RssB.
Protein Sci., 30, 2021
1XM2
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BU of 1xm2 by Molmil
Crystal structure of Human PRL-1
分子名称: SULFATE ION, Tyrosine Phosphatase
著者Jeong, D.G, Kim, S.J, Kim, J.H, Son, J.H, Ryu, S.E.
登録日2004-10-01
公開日2005-01-25
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Trimeric structure of PRL-1 phosphatase reveals an active enzyme conformation and regulation mechanisms
J.Mol.Biol., 345, 2005
4K86
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Crystal structure of human prolyl-tRNA synthetase (apo form)
分子名称: Proline--tRNA ligase, ZINC ION
著者Hwang, K.Y, Son, J.H, Lee, E.H.
登録日2013-04-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Conformational changes in human prolyl-tRNA synthetase upon binding of the substrates proline and ATP and the inhibitor halofuginone.
Acta Crystallogr.,Sect.D, 69, 2013
4K88
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Crystal structure of human prolyl-tRNA synthetase (halofuginone bound form)
分子名称: 7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one, Proline--tRNA ligase, ZINC ION
著者Hwang, K.Y, Son, J.H, Lee, E.H.
登録日2013-04-18
公開日2013-10-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.619 Å)
主引用文献Conformational changes in human prolyl-tRNA synthetase upon binding of the substrates proline and ATP and the inhibitor halofuginone.
Acta Crystallogr.,Sect.D, 69, 2013
4K87
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BU of 4k87 by Molmil
Crystal structure of human prolyl-tRNA synthetase (substrate bound form)
分子名称: ADENOSINE, PROLINE, Proline--tRNA ligase, ...
著者Hwang, K.Y, Son, J.H, Lee, E.H.
登録日2013-04-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Conformational changes in human prolyl-tRNA synthetase upon binding of the substrates proline and ATP and the inhibitor halofuginone.
Acta Crystallogr.,Sect.D, 69, 2013
1YZ4
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BU of 1yz4 by Molmil
Crystal structure of DUSP15
分子名称: SULFATE ION, dual specificity phosphatase-like 15 isoform a, octyl beta-D-glucopyranoside
著者Kim, S.J, Ryu, S.E, Jeong, D.G, Yoon, T.S, Kim, J.H, Cho, Y.H, Jeong, S.K, Lee, J.W, Son, J.H.
登録日2005-02-28
公開日2005-11-01
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the catalytic domain of human VHY, a dual-specificity protein phosphatase
Proteins, 61, 2005
1ZZW
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Crystal Structure of catalytic domain of Human MAP Kinase Phosphatase 5
分子名称: 1,2-ETHANEDIOL, Dual specificity protein phosphatase 10, SULFATE ION
著者Jeong, D.G, Yoon, T.S, Kim, J.H, Shim, M.Y, Jeong, S.K, Son, J.H, Ryu, S.E, Kim, S.J.
登録日2005-06-14
公開日2006-07-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of the Catalytic Domain of Human MAP Kinase Phosphatase 5: Structural Insight into Constitutively Active Phosphatase.
J.Mol.Biol., 360, 2006
7Y28
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Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-[6-(3-fluorophenyl)benzimidazol-1-yl]-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-09
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y3S
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BU of 7y3s by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-(6-bromanyl-7-methyl-imidazo[4,5-b]pyridin-3-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-12
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y1W
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Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: (2R,3S)-2-[3-[4,5-bis(chloranyl)benzimidazol-1-yl]propyl]piperidin-3-ol, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-09
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y1H
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Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-(5-chloranyl-4-methyl-benzimidazol-1-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-08
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
1UC7
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BU of 1uc7 by Molmil
Crystal structure of DsbDgamma
分子名称: Thiol:disulfide interchange protein dsbD
著者Kim, J.H, Kim, S.J, Jeong, D.G, Son, J.H, Ryu, S.E.
登録日2003-04-09
公開日2004-04-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of DsbDgamma reveals the mechanism of redox potential shift and substrate specificity(1)
FEBS LETT., 543, 2003
6KIE
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BU of 6kie by Molmil
Crystal structure of human leucyl-tRNA synthetase, Leu-AMS-bound form
分子名称: 5'-O-(L-leucylsulfamoyl)adenosine, LEUCINE, Leucine--tRNA ligase, ...
著者Kim, S, Son, J, Kim, S, Hwang, K.Y.
登録日2019-07-18
公開日2021-01-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Leucine-sensing mechanism of leucyl-tRNA synthetase 1 for mTORC1 activation.
Cell Rep, 35, 2021
6KID
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Crystal structure of human leucyl-tRNA synthetase, ATP-bound form
分子名称: ADENOSINE-5'-TRIPHOSPHATE, LEUCINE, Leucine--tRNA ligase, ...
著者Kim, S, Son, J, Kim, S, Hwang, K.Y.
登録日2019-07-18
公開日2021-01-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Leucine-sensing mechanism of leucyl-tRNA synthetase 1 for mTORC1 activation.
Cell Rep, 35, 2021

 

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