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PDB: 1138 results

5XV3
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BU of 5xv3 by Molmil
Crystal structure of ATG101-ATG13HORMA
Descriptor: Autophagy-related protein 101, Autophagy-related protein 13, DI(HYDROXYETHYL)ETHER
Authors:Kim, B.-W, Song, H.K.
Deposit date:2017-06-26
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation.
Autophagy, 14, 2018
5HZY
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BU of 5hzy by Molmil
Crystal structure of the legionella pneumophila effector protein RavZ - P6322
Descriptor: Uncharacterized protein RavZ
Authors:Kwon, D.H, Kim, L, Kim, B.-W, Hong, S.B, Song, H.K.
Deposit date:2016-02-03
Release date:2016-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.548 Å)
Cite:The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane
Autophagy, 13, 2017
5WT9
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BU of 5wt9 by Molmil
Complex structure of PD-1 and nivolumab-Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Nivolumab, Light Chain of Nivolumab, ...
Authors:Tan, S, Zhang, H, Chai, Y, Song, H, Tong, Z, Wang, Q, Qi, J, Wong, G, Zhu, X, Liu, W.J, Gao, S, Wang, Z, Shi, Y, Yang, F, Gao, G.F, Yan, J.
Deposit date:2016-12-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:An unexpected N-terminal loop in PD-1 dominates binding by nivolumab.
Nat Commun, 8, 2017
5WZ1
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BU of 5wz1 by Molmil
Crystal structure of Zika virus NS5 methyltransferase bound to S-adenosyl-L-methionine
Descriptor: NS5 methyltransferase, S-ADENOSYLMETHIONINE
Authors:Duan, W, Song, H, Qi, J, Shi, Y, Gao, G.F.
Deposit date:2017-01-16
Release date:2017-03-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.507 Å)
Cite:The crystal structure of Zika virus NS5 reveals conserved drug targets.
EMBO J., 36, 2017
3M6N
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BU of 3m6n by Molmil
Crystal structure of RpfF
Descriptor: RpfF protein
Authors:Lim, S.C, Cheng, Z, Qamra, R, Song, H.
Deposit date:2010-03-16
Release date:2010-09-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of the Sensor-Synthase Interaction in Autoinduction of the Quorum Sensing Signal DSF Biosynthesis
Structure, 18, 2010
5XAD
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BU of 5xad by Molmil
NLIR - LC3B fusion protein
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B, Uncharacterised protein
Authors:Kwon, D.H, Kim, L, Song, H.K.
Deposit date:2017-03-12
Release date:2017-07-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A novel conformation of the LC3-interacting region motif revealed by the structure of a complex between LC3B and RavZ
Biochem. Biophys. Res. Commun., 490, 2017
3ZYP
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BU of 3zyp by Molmil
Cellulose induced protein, Cip1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CIP1, ...
Authors:Jacobson, F, Karkehabadi, S, Hansson, H, Goedegebuur, F, Wallace, L, Mitchinson, C, Piens, K, Stals, I, Sandgren, M.
Deposit date:2011-08-24
Release date:2012-09-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of the Core Domain of a Cellulose Induced Protein (Cip1) from Hypocrea Jecorina, at 1.5 A Resolution.
Plos One, 8, 2013
5WZ2
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BU of 5wz2 by Molmil
Crystal structure of Zika virus NS5 methyltransferase bound to SAM and RNA analogue (m7GpppA)
Descriptor: NS5 MTase, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, S-ADENOSYLMETHIONINE
Authors:Duan, W, Song, H, Qi, J, Shi, Y, Gao, G.F.
Deposit date:2017-01-16
Release date:2017-03-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of Zika virus NS5 reveals conserved drug targets.
EMBO J., 36, 2017
5XGR
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BU of 5xgr by Molmil
Structure of the S1 subunit C-terminal domain from bat-derived coronavirus HKU5 spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1
Authors:Xue, H, Qi, J, Song, H, Qihui, W, Shi, Y, Gao, G.F.
Deposit date:2017-04-16
Release date:2017-05-10
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the S1 subunit C-terminal domain from bat-derived coronavirus HKU5 spike protein
Virology, 507, 2017
5XV6
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BU of 5xv6 by Molmil
Crystal structure of ATG101-ATG13HORMA
Descriptor: Autophagy-related protein 101, Autophagy-related protein 13
Authors:Kim, B.-W, Song, H.K.
Deposit date:2017-06-26
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.455 Å)
Cite:The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation.
Autophagy, 14, 2018
5K66
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BU of 5k66 by Molmil
Crystal structure of N-terminal amidase with Asn-Glu peptide
Descriptor: ASPARAGINE, GLUTAMIC ACID, Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
3MC0
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BU of 3mc0 by Molmil
Crystal Structure of Staphylococcal Enterotoxin G (SEG) in Complex with a Mouse T-cell Receptor beta Chain
Descriptor: ACETATE ION, Enterotoxin SEG, variable beta 8.2 mouse T cell receptor
Authors:Fernandez, M.M, Cho, S, Robinson, H, Mariuzza, R.A, Malchiodi, E.L.
Deposit date:2010-03-26
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of staphylococcal enterotoxin G (SEG) in complex with a mouse T-cell receptor {beta} chain.
J.Biol.Chem., 286, 2011
5K62
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BU of 5k62 by Molmil
Crystal structure of N-terminal amidase C187S
Descriptor: ASPARAGINE, Nta1p, VALINE
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5YSI
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BU of 5ysi by Molmil
SdeA mART-C domain EE/AA NCA complex
Descriptor: NICOTINAMIDE, Ubiquitinating/deubiquitinating enzyme SdeA
Authors:Kim, L, Kwon, D.H, Song, H.K.
Deposit date:2017-11-14
Release date:2018-08-29
Method:X-RAY DIFFRACTION (1.546 Å)
Cite:Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila
J. Mol. Biol., 430, 2018
7BZN
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BU of 7bzn by Molmil
Cryo-EM structure of mature Coxsackievirus A10 at pH 7.4
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J.
Deposit date:2020-04-28
Release date:2020-07-22
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1.
Proc.Natl.Acad.Sci.USA, 117, 2020
7BZO
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BU of 7bzo by Molmil
Cryo-EM structure of mature Coxsackievirus A10 at pH 5.5
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J.
Deposit date:2020-04-28
Release date:2020-07-22
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1.
Proc.Natl.Acad.Sci.USA, 117, 2020
3NIL
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BU of 3nil by Molmil
The structure of UBR box (RDAA)
Descriptor: ACETATE ION, E3 ubiquitin-protein ligase UBR1, Peptide RDAA, ...
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIK
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BU of 3nik by Molmil
The structure of UBR box (REAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide REAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIS
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BU of 3nis by Molmil
The structure of UBR box (native2)
Descriptor: ACETATE ION, E3 ubiquitin-protein ligase UBR1, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
5K5U
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BU of 5k5u by Molmil
Crystal structure of N-terminal amidase
Descriptor: Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K63
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BU of 5k63 by Molmil
Crystal structure of N-terminal amidase C187S
Descriptor: ASPARAGINE, GLYCINE, Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
7BV7
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BU of 7bv7 by Molmil
INTS3 complexed with INTS6
Descriptor: Integrator complex subunit 3, Integrator complex subunit 6
Authors:Jia, Y, Bharath, S.R, Song, H.
Deposit date:2020-04-09
Release date:2021-07-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the INTS3/INTS6 complex reveals the functional importance of INTS3 dimerization in DSB repair.
Cell Discov, 7, 2021
3NIM
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BU of 3nim by Molmil
The structure of UBR box (RRAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide RRAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
2HUI
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BU of 2hui by Molmil
Crystal structure of Aedes aegypti alanine glyoxylate aminotransferase in complex with glyoxylic acid
Descriptor: Alanine glyoxylate aminotransferase, GLYOXYLIC ACID
Authors:Han, Q, Robinson, H, Gao, Y.G, Vogelaar, N, Wilson, S.R, Rizzi, M, Li, J.
Deposit date:2006-07-26
Release date:2006-09-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structures of Aedes aegypti Alanine Glyoxylate Aminotransferase.
J.Biol.Chem., 281, 2006
2HUU
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BU of 2huu by Molmil
Crystal structure of Aedes aegypti alanine glyoxylate aminotransferase in complex with alanine
Descriptor: 1-BUTANOL, ALANINE, Alanine glyoxylate aminotransferase
Authors:Han, Q, Robinson, H, Gao, Y.G, Vogelaar, N, Wilson, S.R, Rizzi, M, Li, J.
Deposit date:2006-07-27
Release date:2006-09-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Aedes aegypti Alanine Glyoxylate Aminotransferase.
J.Biol.Chem., 281, 2006

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數據於2024-10-09公開中

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