4XG9
| Crystal structure of an inhibitor-bound Syk | Descriptor: | 1-[(1-{2-[(3-chloro-1,2-dimethyl-1H-indol-5-yl)amino]pyrimidin-4-yl}-3-methyl-1H-pyrazol-4-yl)methyl]azetidin-3-ol, Tyrosine-protein kinase SYK | Authors: | Lee, S.J, Choi, J, Han, B.G, Song, H, Koh, J.S, Lee, B.I. | Deposit date: | 2014-12-30 | Release date: | 2015-12-30 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.91 Å) | Cite: | Crystal structures of spleen tyrosine kinase in complex with novel inhibitors: structural insights for design of anticancer drugs Febs J., 283, 2016
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5U7G
| Crystal Structure of the Catalytic Core of CBP | Descriptor: | CREB-binding protein, ZINC ION | Authors: | Park, S, Stanfield, R.L, Martinez-Yamout, M.M, Dyson, H.J, Wilson, I.A, Wright, P.E. | Deposit date: | 2016-12-12 | Release date: | 2017-06-21 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.401 Å) | Cite: | Role of the CBP catalytic core in intramolecular SUMOylation and control of histone H3 acetylation. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
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4XG3
| Crystal structure of an inhibitor-bound Syk | Descriptor: | 4-{[5-fluoro-4-(3-{[(3R)-3-hydroxypyrrolidin-1-yl]methyl}-4-methyl-1H-pyrrol-1-yl)pyrimidin-2-yl]amino}-2,6-dimethylphenyl methanesulfonate, Tyrosine-protein kinase SYK | Authors: | Lee, S.J, Choi, J, Han, B.G, Song, H, Koh, J.S, Lee, B.I. | Deposit date: | 2014-12-30 | Release date: | 2015-12-30 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structures of spleen tyrosine kinase in complex with novel inhibitors: structural insights for design of anticancer drugs Febs J., 283, 2016
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8XB8
| The structure of ASFV A137R | Descriptor: | A137R | Authors: | Li, C, Song, H, Gao, G.F. | Deposit date: | 2023-12-06 | Release date: | 2024-01-31 | Last modified: | 2024-04-03 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | African swine fever virus A137R assembles into a dodecahedron cage. J.Virol., 98, 2024
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8XAK
| Structure of Pif1-G4 complex | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase PIF1, DNA (34-MER), ... | Authors: | Hong, Z, Song, H. | Deposit date: | 2023-12-04 | Release date: | 2024-07-31 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | Eukaryotic Pif1 helicase unwinds G-quadruplex and dsDNA using a conserved wedge. Nat Commun, 15, 2024
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4ZUY
| Structure of Tsi6 from Pseudomonas aeruginosa | Descriptor: | CHLORIDE ION, Tsi6 | Authors: | Whitney, J.C, Sawai, S, Robinson, H, Mougous, J.D. | Deposit date: | 2015-05-18 | Release date: | 2015-11-11 | Last modified: | 2019-12-11 | Method: | X-RAY DIFFRACTION (1.952 Å) | Cite: | An Interbacterial NAD(P)(+) Glycohydrolase Toxin Requires Elongation Factor Tu for Delivery to Target Cells. Cell, 163, 2015
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3L4F
| Crystal Structure of betaPIX Coiled-Coil Domain and Shank PDZ Complex | Descriptor: | Rho guanine nucleotide exchange factor 7, SH3 and multiple ankyrin repeat domains protein 1 | Authors: | Im, Y.J, Kang, G.B, Lee, J.H, Song, H.E, Park, K.R, Kim, E, Song, W.K, Park, D, Eom, S.H. | Deposit date: | 2009-12-19 | Release date: | 2010-02-16 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Structural basis for asymmetric association of the betaPIX coiled coil and shank PDZ J.Mol.Biol., 397, 2010
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6ICO
| Pseudomonas putida CBB5 NdmA with theophylline | Descriptor: | COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICM
| Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.961 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICP
| Pseudomonas putida CBB5 NdmA QL mutant with caffeine | Descriptor: | CAFFEINE, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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7V97
| Arsenic-bound p53 DNA-binding domain mutant V272M | Descriptor: | ARSENIC, Cellular tumor antigen p53, ZINC ION | Authors: | Lu, M, Xing, Y.F, Wang, Z.Y, Ni, Y, Song, H.X. | Deposit date: | 2021-08-24 | Release date: | 2022-08-31 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.02 Å) | Cite: | Diverse rescue potencies of p53 mutations to ATO are predetermined by intrinsic mutational properties. Sci Transl Med, 15, 2023
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6ICN
| Pseudomonas putida CBB5 NdmA with caffeine | Descriptor: | CAFFEINE, COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICQ
| Pseudomonas putida CBB5 NdmA QL mutant with theobromine | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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3N0I
| Crystal Structure of Ad37 fiber knob in complex with GD1a oligosaccharide | Descriptor: | Fiber, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ZINC ION | Authors: | Nilsson, E.C, Storm, R.J, Bauer, J, Johansson, S.M.C, Lookene, A, Angstroem, J, Hedenstroem, M, Fraengsmyr, L, Rinaldi, S, Willison, H, Domelloef, F.P, Stehle, T, Arnberg, N. | Deposit date: | 2010-05-14 | Release date: | 2010-12-29 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | The GD1a glycan is a cellular receptor for adenoviruses causing epidemic keratoconjunctivitis. NAT.MED. (N.Y.), 17, 2011
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4ZV4
| Structure of Tse6 in complex with EF-Tu | Descriptor: | Elongation factor Tu, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Whitney, J.C, Sawai, S, Robinson, H, Mougous, J.D. | Deposit date: | 2015-05-18 | Release date: | 2015-11-11 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (3.504 Å) | Cite: | An Interbacterial NAD(P)(+) Glycohydrolase Toxin Requires Elongation Factor Tu for Delivery to Target Cells. Cell, 163, 2015
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6ICK
| Pseudomonas putida CBB5 NdmA | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.952 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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4WCJ
| Structure of IcaB from Ammonifex degensii | Descriptor: | CHLORIDE ION, Polysaccharide deacetylase, ZINC ION | Authors: | Little, D.J, Bamford, N.C, Pokrovskaya, V, Robinson, H, Nitz, M, Howell, P.L. | Deposit date: | 2014-09-04 | Release date: | 2014-11-12 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structural Basis for the De-N-acetylation of Poly-beta-1,6-N-acetyl-d-glucosamine in Gram-positive Bacteria. J.Biol.Chem., 289, 2014
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6ICL
| Pseudomonas putida CBB5 NdmB | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N3-demethylase NdmB | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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5IO3
| Crystal structure of the legionella pneumophila effector protein RavZ - I422 | Descriptor: | Uncharacterized protein RavZ | Authors: | Kwon, D.H, Kim, L, Kim, B.-W, Hong, S.B, Song, H.K. | Deposit date: | 2016-03-08 | Release date: | 2016-11-09 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.74 Å) | Cite: | The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane Autophagy, 13, 2017
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7WG4
| DVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-28 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.51 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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7WG2
| EVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-28 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.76 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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7WFX
| EVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-27 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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7WG1
| DVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-27 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (2.19 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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4F6N
| Crystal structure of Kaiso zinc finger DNA binding protein in complex with methylated CpG site DNA | Descriptor: | DNA (5'-D(*CP*GP*TP*AP*TP*AP*GP*AP*(5CM)P*GP*(5CM)P*GP*GP*TP*GP*AP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*TP*CP*AP*CP*(5CM)P*GP*(5CM)P*GP*TP*CP*TP*AP*TP*AP*CP*G)-3'), GLYCEROL, ... | Authors: | Buck-Koehntop, B.A, Stanfield, R.L, Ekiert, D.C, Martinez-Yamout, M.A, Dyson, H.J, Wilson, I.A, Wright, P.E. | Deposit date: | 2012-05-15 | Release date: | 2012-09-05 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Molecular basis for recognition of methylated and specific DNA sequences by the zinc finger protein Kaiso. Proc.Natl.Acad.Sci.USA, 109, 2012
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4F6M
| Crystal structure of Kaiso zinc finger DNA binding domain in complex with Kaiso binding site DNA | Descriptor: | DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*GP*GP*CP*AP*GP*GP*AP*AP*GP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*CP*TP*TP*CP*CP*TP*GP*CP*CP*AP*AP*TP*AP*AP*CP*G)-3'), Transcriptional regulator Kaiso, ... | Authors: | Buck-Koehntop, B.A, Stanfield, R.L, Ekiert, D.C, Martinez-Yamout, M.A, Dyson, H.J, Wilson, I.A, Wright, P.E. | Deposit date: | 2012-05-15 | Release date: | 2012-09-05 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Molecular basis for recognition of methylated and specific DNA sequences by the zinc finger protein Kaiso. Proc.Natl.Acad.Sci.USA, 109, 2012
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