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PDB: 1135 件
6PC3
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BU of 6pc3 by Molmil
Crystal structure of Helicobacter pylori PPX/GppA in complex with GSP
分子名称: 1,2-ETHANEDIOL, 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, CHLORIDE ION, ...
著者Song, H, Wang, C, Shaw, G.X, Ji, X.
登録日2019-06-15
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and activity of PPX/GppA homologs from Escherichia coli and Helicobacter pylori.
Febs J., 287, 2020
6PC2
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BU of 6pc2 by Molmil
Crystal structure of Helicobacter pylori PPX/GppA in complex with GNP
分子名称: Guanosine pentaphosphate phosphohydrolase, MAGNESIUM ION, PHOSPHATE ION, ...
著者Song, H, Wang, C, Shaw, G.X, Ji, X.
登録日2019-06-15
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure and activity of PPX/GppA homologs from Escherichia coli and Helicobacter pylori.
Febs J., 287, 2020
1T91
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BU of 1t91 by Molmil
crystal structure of human small GTPase Rab7(GTP)
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-7
著者Song, H, Hong, W, Wu, M, Wang, T.
登録日2004-05-14
公開日2005-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for recruitment of RILP by small GTPase Rab7.
Embo J., 24, 2005
5D6M
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BU of 5d6m by Molmil
Mn(II)-loaded MnCcP.1
分子名称: Cytochrome c peroxidase, mitochondrial, MANGANESE (II) ION, ...
著者Robinson, H, Gao, Y.-G, Hosseinzadeh, P, Lu, Y.
登録日2015-08-12
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.653 Å)
主引用文献Enhancing Mn(II)-Binding and Manganese Peroxidase Activity in a Designed Cytochrome c Peroxidase through Fine-Tuning Secondary-Sphere Interactions.
Biochemistry, 55, 2016
5OUF
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BU of 5ouf by Molmil
Crystal structure of OphA-DeltaC6 mutant W400A in complex with Sinefungin
分子名称: BICARBONATE ION, OphA peptide N-methyltransferase, SINEFUNGIN, ...
著者Song, H, Naismith, J.H.
登録日2017-08-23
公開日2018-09-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5N0R
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BU of 5n0r by Molmil
Crystal structure of OphA-DeltaC6 mutant Y66F in complex with SAM
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Peptide N-methyltransferase, ...
著者Song, H, Naismith, J.H.
登録日2017-02-03
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5N4I
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BU of 5n4i by Molmil
Crystal structure of OphA-DeltaC6 mutant W400A in complex with SAM
分子名称: BICARBONATE ION, GLYCEROL, MALONATE ION, ...
著者Song, H, Naismith, J.H.
登録日2017-02-10
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5N0S
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BU of 5n0s by Molmil
Crystal structure of OphA-DeltaC6 mutant Y98A in complex with SAM
分子名称: MALONATE ION, Peptide N-methyltransferase, S-ADENOSYLMETHIONINE
著者Song, H, Naismith, J.H.
登録日2017-02-03
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5N0X
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BU of 5n0x by Molmil
Crystal structure of OphA-DeltaC6 in complex with SAM
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Peptide N-Methyltransferase, ...
著者Song, H, Naismith, J.H.
登録日2017-02-03
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5N0T
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BU of 5n0t by Molmil
Crystal structure of OphA-DeltaC6 mutant Y76F in complex with SAM
分子名称: Peptide N-methyltransferase, S-ADENOSYLMETHIONINE
著者Song, H, Naismith, J.H.
登録日2017-02-03
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5N0N
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BU of 5n0n by Molmil
Crystal structure of OphA-DeltaC6 mutant Y63F in complex with SAM
分子名称: MAGNESIUM ION, Peptide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Song, H, Naismith, J.H.
登録日2017-02-03
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5N0U
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BU of 5n0u by Molmil
Crystal structure of OphA-DeltaC6 mutant R72A in complex with SAH
分子名称: MAGNESIUM ION, Peptide N-Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Song, H, Naismith, J.H.
登録日2017-02-03
公開日2018-02-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5O2X
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BU of 5o2x by Molmil
Extended catalytic domain of H. jecorina LPMO9A a.k.a EG4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, Glycoside hydrolase family 61, ...
著者Hansson, H, Karkehabadi, S, Mikkelsen, N.E, Sandgren, M, Kelemen, B, Kaper, T.
登録日2017-05-23
公開日2017-09-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献High-resolution structure of a lytic polysaccharide monooxygenase from Hypocrea jecorina reveals a predicted linker as an integral part of the catalytic domain.
J. Biol. Chem., 292, 2017
5N0W
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BU of 5n0w by Molmil
Crystal structure of OphA-DeltaC6 mutant R72A in complex with SAM
分子名称: GLYCEROL, Peptide N-methyltransferase, S-ADENOSYLMETHIONINE
著者Song, H, Naismith, J.H.
登録日2017-02-03
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5N0V
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BU of 5n0v by Molmil
Crystal structure of OphA-DeltaC6 mutant Y76F in complex with SAH
分子名称: Peptide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Song, H, Naismith, J.H.
登録日2017-02-03
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
4U1T
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BU of 4u1t by Molmil
The crystal structure of holo CalE6, a methionine gamma lyase from Micromonospora echinospora
分子名称: CalE6, SULFATE ION
著者Song, H.G, Guo, Z.H.
登録日2014-07-16
公開日2015-01-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification and Characterization of a Methionine gamma-Lyase in the Calicheamicin Biosynthetic Cluster of Micromonospora echinospora
Chembiochem, 16, 2015
4U2H
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BU of 4u2h by Molmil
The crystal structure of apo CalE6, a methionine gamma lyase from Micromonospora echinospora
分子名称: CalE6, SULFATE ION
著者Song, H.G, Xu, R.
登録日2014-07-17
公開日2015-01-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Identification and Characterization of a Methionine gamma-Lyase in the Calicheamicin Biosynthetic Cluster of Micromonospora echinospora
Chembiochem, 16, 2015
8ORR
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BU of 8orr by Molmil
Outer membrane protein assembly factor BamB from Klebsiella pneumoniae
分子名称: CADMIUM ION, Outer membrane protein assembly factor BamB
著者Song, H, Bolla, J.R.
登録日2023-04-17
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Outer membrane protein assembly factor BamB from Klebsiella pneumoniae
To Be Published
7ZB1
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BU of 7zb1 by Molmil
S580A with 18mer
分子名称: 1,2-ETHANEDIOL, 18mer, BICARBONATE ION, ...
著者Song, H, Naismith, J.H.
登録日2022-03-23
公開日2022-07-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
Biorxiv, 2022
7ZB0
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BU of 7zb0 by Molmil
macrocyclase OphP with 15mer
分子名称: 1,2-ETHANEDIOL, 15mer, BICARBONATE ION, ...
著者Song, H, Naismith, J.H.
登録日2022-03-23
公開日2022-07-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
Biorxiv, 2022
7ZAZ
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BU of 7zaz by Molmil
macrocyclase OphP with ZPP
分子名称: 1,2-ETHANEDIOL, BICARBONATE ION, DIMETHYL SULFOXIDE, ...
著者Song, H, Naismith, J.H.
登録日2022-03-23
公開日2022-07-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
Biorxiv, 2022
7ZB2
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BU of 7zb2 by Molmil
apo macrocyclase OphP
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Song, H, Naismith, J.H.
登録日2022-03-23
公開日2022-07-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
Biorxiv, 2022
6JO8
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BU of 6jo8 by Molmil
The complex structure of CHIKV envelope glycoprotein bound to human MXRA8
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHIKV E1, ...
著者Song, H, Zhao, Z, Qi, J, Gao, F, Gao, F.G.
登録日2019-03-20
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.495 Å)
主引用文献Molecular Basis of Arthritogenic Alphavirus Receptor MXRA8 Binding to Chikungunya Virus Envelope Protein.
Cell, 177, 2019
6QZY
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BU of 6qzy by Molmil
full length OphA V406P in complex with SAH
分子名称: ASN-GLY-PHE-PRO-TRP-MVA-ILE-MVA-VAL-GLY-PRO-ILE-GLY, MAGNESIUM ION, Peptide N-methyltransferase, ...
著者Song, H, Naismith, J.H.
登録日2019-03-12
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Substrate Plasticity of a Fungal Peptide alpha-N-Methyltransferase.
Acs Chem.Biol., 15, 2020
6QZZ
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full length OphA V404E in complex with SAH
分子名称: Peptide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Song, H, Naismith, J.H.
登録日2019-03-12
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Substrate Plasticity of a Fungal Peptide alpha-N-Methyltransferase.
Acs Chem.Biol., 15, 2020

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