Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17 results

6ZFF
DownloadVisualize
BU of 6zff by Molmil
Pyrococcus furiosus Rad50 coiled coils in rod configuration
Descriptor: DNA double-strand break repair Rad50 ATPase, ZINC ION
Authors:Soh, Y.M, Basquin, J, Gruber, S.
Deposit date:2020-06-17
Release date:2020-07-08
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:A rod conformation of the Pyrococcus furiosus Rad50 coiled coil.
Proteins, 89, 2021
6SDK
DownloadVisualize
BU of 6sdk by Molmil
Crystal structure of bacterial ParB dimer bound to CDP
Descriptor: CALCIUM ION, CYTIDINE-5'-DIPHOSPHATE, Stage 0 sporulation protein J
Authors:Soh, Y.M, Basquin, J, Gruber, S.
Deposit date:2019-07-28
Release date:2019-10-23
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Self-organization ofparScentromeres by the ParB CTP hydrolase.
Science, 366, 2019
4RSI
DownloadVisualize
BU of 4rsi by Molmil
Yeast Smc2-Smc4 hinge domain with extended coiled coils
Descriptor: PHOSPHATE ION, Structural maintenance of chromosomes protein 2, Structural maintenance of chromosomes protein 4
Authors:Soh, Y.M, Shin, H.C, Oh, B.H.
Deposit date:2014-11-08
Release date:2014-12-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular Basis for SMC Rod Formation and Its Dissolution upon DNA Binding.
Mol.Cell, 57, 2015
4RSJ
DownloadVisualize
BU of 4rsj by Molmil
Pyrococcus furiosus Smc hinge domain with an extended coiled coil
Descriptor: Chromosome partition protein Smc
Authors:Soh, Y.M, Shin, H.C, Oh, B.H.
Deposit date:2014-11-08
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Molecular Basis for SMC Rod Formation and Its Dissolution upon DNA Binding.
Mol.Cell, 57, 2015
4R0G
DownloadVisualize
BU of 4r0g by Molmil
Crystal structure of Lpg0393 from Legionella pneumophila
Descriptor: Uncharacterized protein
Authors:Sohn, Y.S, Shin, H.C, Oh, B.H.
Deposit date:2014-07-31
Release date:2015-04-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Lpg0393 of Legionella pneumophila Is a Guanine-Nucleotide Exchange Factor for Rab5, Rab21 and Rab22
Plos One, 10, 2015
4I99
DownloadVisualize
BU of 4i99 by Molmil
Crystal structure of the SmcHead bound to the C-winged helix domain of ScpA
Descriptor: Chromosome partition protein Smc, PHOSPHATE ION, Putative uncharacterized protein
Authors:Shin, H.C, Soh, Y.M, Oh, B.H.
Deposit date:2012-12-05
Release date:2013-01-30
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An asymmetric SMC-kleisin bridge in prokaryotic condensin.
Nat.Struct.Mol.Biol., 20, 2013
3ZGX
DownloadVisualize
BU of 3zgx by Molmil
Crystal structure of the kleisin-N SMC interface in prokaryotic condensin
Descriptor: CHROMOSOME PARTITION PROTEIN SMC, SEGREGATION AND CONDENSATION PROTEIN A
Authors:Burmann, F, Shin, H, Basquin, J, Soh, Y, Gimenez, V, Kim, Y, Oh, B, Gruber, S.
Deposit date:2012-12-19
Release date:2013-01-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:An Asymmetric Smc-Kleisin Bridge in Prokaryotic Condensin.
Nat.Struct.Mol.Biol., 20, 2013
5GL4
DownloadVisualize
BU of 5gl4 by Molmil
Crystal structure of TON_0340 in complex with Mn
Descriptor: MANGANESE (II) ION, Uncharacterized protein
Authors:Lee, S.G, Sohn, Y.S, Oh, B.H.
Deposit date:2016-07-08
Release date:2016-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of a Highly Conserved Hypothetical Protein TON_0340 as a Probable Manganese-Dependent Phosphatase.
PLoS ONE, 11, 2016
6AVJ
DownloadVisualize
BU of 6avj by Molmil
Crystal structure of human Mitochondrial inner NEET protein (MiNT)/CISD3
Descriptor: CDGSH iron-sulfur domain-containing protein 3, mitochondrial, FE2/S2 (INORGANIC) CLUSTER
Authors:Lipper, C.H, Karmi, O, Sohn, Y.S, Darash-Yahana, M, Lammert, H, Song, L, Liu, A, Mittler, R, Nechushtai, R, Onuchic, J.N, Jennings, P.A.
Deposit date:2017-09-02
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the human monomeric NEET protein MiNT and its role in regulating iron and reactive oxygen species in cancer cells.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5B59
DownloadVisualize
BU of 5b59 by Molmil
Hen egg-white lysozyme modified with a keto-ABNO.
Descriptor: (2~{S})-2-azanyl-3-[(2~{R},3~{S})-2-oxidanyl-3-[[(1~{S},5~{R})-3-oxidanylidene-9-azabicyclo[3.3.1]nonan-9-yl]oxy]-1,2-dihydroindol-3-yl]propanal, Lysozyme C
Authors:Sasaki, D, Seki, Y, Sohma, Y, Oisaki, K, Kanai, M.
Deposit date:2016-04-28
Release date:2016-09-14
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Transition Metal-Free Tryptophan-Selective Bioconjugation of Proteins
J.Am.Chem.Soc., 138, 2016
5GL2
DownloadVisualize
BU of 5gl2 by Molmil
Crystal structure of TON_0340 in complex with Ca
Descriptor: CALCIUM ION, Uncharacterized protein
Authors:Lee, S.G, Sohn, Y.S, Oh, B.H.
Deposit date:2016-07-07
Release date:2016-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Identification of a Highly Conserved Hypothetical Protein TON_0340 as a Probable Manganese-Dependent Phosphatase.
PLoS ONE, 11, 2016
5GL3
DownloadVisualize
BU of 5gl3 by Molmil
Crystal structure of TON_0340 in complex with Mg
Descriptor: MAGNESIUM ION, Uncharacterized protein
Authors:Lee, S.G, Sohn, Y.S, Oh, B.H.
Deposit date:2016-07-07
Release date:2016-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of a Highly Conserved Hypothetical Protein TON_0340 as a Probable Manganese-Dependent Phosphatase.
PLoS ONE, 11, 2016
5GKX
DownloadVisualize
BU of 5gkx by Molmil
Crystal structure of TON_0340, apo form
Descriptor: PHOSPHATE ION, Uncharacterized protein
Authors:Lee, S.G, Sohn, Y.S, Oh, B.H.
Deposit date:2016-07-07
Release date:2016-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Identification of a Highly Conserved Hypothetical Protein TON_0340 as a Probable Manganese-Dependent Phosphatase.
PLoS ONE, 11, 2016
3WWI
DownloadVisualize
BU of 3wwi by Molmil
Crystal structure of the G136F mutant of the first R-stereoselective -transaminase identified from Arthrobacter sp. KNK168 (FERM-BP-5228)
Descriptor: (R)-amine transaminase, PYRIDOXAL-5'-PHOSPHATE
Authors:Guan, L.J, Ohtsuka, J, Miyakawa, T, Zhi, Y, Ito, N, Yasohara, Y, Tanokura, M.
Deposit date:2014-06-18
Release date:2015-08-19
Last modified:2020-01-22
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
3WWJ
DownloadVisualize
BU of 3wwj by Molmil
Crystal structure of an engineered sitagliptin-producing transaminase, ATA-117-Rd11
Descriptor: (R)-amine transaminase, PYRIDOXAL-5'-PHOSPHATE
Authors:Guan, L.J, Ohtsuka, J, Okai, M, Miyakawa, T, Mase, T, Zhi, Y, Hou, F, Ito, N, Yasohara, Y, Tanokura, M.
Deposit date:2014-06-18
Release date:2015-08-12
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
3WWH
DownloadVisualize
BU of 3wwh by Molmil
Crystal structure of the first R-stereoselective -transaminase identified from Arthrobacter sp. KNK168 (FERM-BP-5228)
Descriptor: (R)-amine transaminase, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
Authors:Guan, L.J, Ohtsuka, J, Okai, M, Miyakawa, T, Mase, T, Zhi, Y, Ito, N, Yasohara, Y, Tanokura, M.
Deposit date:2014-06-18
Release date:2015-08-12
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
8YG2
DownloadVisualize
BU of 8yg2 by Molmil
Crystal structure of amyloidogenic peptide Piv-NFGAIL-NH2 from Islet Amyloid Polypeptide
Descriptor: Amyloidogenic peptide from Islet Amyloid Polypeptide, FORMIC ACID
Authors:Sawazaki, T, Sasaki, D, Sohma, Y.
Deposit date:2024-02-26
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Catalysis driven by an amyloid-substrate complex.
Proc.Natl.Acad.Sci.USA, 121, 2024

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon