Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 220 results

7N2T
DownloadVisualize
BU of 7n2t by Molmil
O-acetylserine sulfhydrylase from Citrullus vulgaris in the internal aldimine state, with citrate bound
Descriptor: CITRIC ACID, Cysteine synthase, PENTAETHYLENE GLYCOL, ...
Authors:Smith, J.L, Buller, A.R, Bingman, C.A.
Deposit date:2021-05-29
Release date:2022-07-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Investigation of beta-Substitution Activity of O-Acetylserine Sulfhydrolase from Citrullus vulgaris.
Chembiochem, 23, 2022
4WXY
DownloadVisualize
BU of 4wxy by Molmil
PLPS (inactive glutaminase mutant) co-crystallized with glutamine and R5P.
Descriptor: Glutamine amidotransferase subunit PdxT, Pyridoxal biosynthesis lyase PdxS
Authors:Smith, J.L, Smith, A.M.
Deposit date:2014-11-14
Release date:2015-01-14
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures capture three states in the catalytic cycle of a pyridoxal phosphate (PLP) synthase.
J.Biol.Chem., 290, 2015
4WY0
DownloadVisualize
BU of 4wy0 by Molmil
PdxS (G. stearothermophilus) co-crystallized with R5P in the presence of ammonia.
Descriptor: 1,2-ETHANEDIOL, CACODYLATE ION, PHOSPHATE ION, ...
Authors:Smith, J.L, Smith, A.M.
Deposit date:2014-11-14
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures capture three states in the catalytic cycle of a pyridoxal phosphate (PLP) synthase.
J.Biol.Chem., 290, 2015
4WXZ
DownloadVisualize
BU of 4wxz by Molmil
PdxS (G. stearothermophilus) co-crystallized with R5P
Descriptor: Pyridoxal biosynthesis lyase PdxS
Authors:Smith, J.L, Smith, A.M.
Deposit date:2014-11-14
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures capture three states in the catalytic cycle of a pyridoxal phosphate (PLP) synthase.
J.Biol.Chem., 290, 2015
6N3P
DownloadVisualize
BU of 6n3p by Molmil
Crosslinked AcpP=FabZ complex from E. coli Type II FAS
Descriptor: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, Acyl carrier protein, N~3~-{(2R)-4-[(dihydroxyphosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-N-(3-{[(1Z)-pent-1-en-1-yl]sulfonyl}propyl)-beta-alaninamide
Authors:Smith, J.L, Dodge, G.J.
Deposit date:2018-11-15
Release date:2019-03-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and dynamical rationale for fatty acid unsaturation inEscherichia coli.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
3EBX
DownloadVisualize
BU of 3ebx by Molmil
REFINEMENT AT 1.4 ANGSTROMS RESOLUTION OF A MODEL OF ERABUTOXIN B. TREATMENT OF ORDERED SOLVENT AND DISCRETE DISORDER
Descriptor: ERABUTOXIN B, SULFATE ION
Authors:Smith, J.L, Corfield, P.W.R, Hendrickson, W.A, Low, B.W.
Deposit date:1988-01-15
Release date:1988-04-16
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Refinement at 1.4 A resolution of a model of erabutoxin b: treatment of ordered solvent and discrete disorder.
Acta Crystallogr.,Sect.A, 44, 1988
3FLB
DownloadVisualize
BU of 3flb by Molmil
RifR - Type II thioesterase from Rifamycin NRPS/PKS biosynthetic pathway - Form 2
Descriptor: CHLORIDE ION, RifR, TETRAETHYLENE GLYCOL
Authors:Smith, J.L, Akey, D.L.
Deposit date:2008-12-18
Release date:2009-01-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Functional Analysis of RifR, the Type II Thioesterase from the Rifamycin Biosynthetic Pathway.
J.Biol.Chem., 284, 2009
3FLA
DownloadVisualize
BU of 3fla by Molmil
RifR - Type II thioesterase from Rifamycin NRPS/PKS biosynthetic pathway - Form 1
Descriptor: CHLORIDE ION, RifR
Authors:Smith, J.L, Akey, D.L.
Deposit date:2008-12-18
Release date:2009-01-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Functional Analysis of RifR, the Type II Thioesterase from the Rifamycin Biosynthetic Pathway.
J.Biol.Chem., 284, 2009
1HR3
DownloadVisualize
BU of 1hr3 by Molmil
STRUCTURE OF TRIMERIC HAEMERYTHRIN
Descriptor: HEMERYTHRIN, MONOAZIDO-MU-OXO-DIIRON
Authors:Smith, J.L, Hendrickson, W.A, Addison, A.W.
Deposit date:1983-05-06
Release date:1983-06-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Structure of trimeric haemerythrin.
Nature, 303, 1983
5FFM
DownloadVisualize
BU of 5ffm by Molmil
Yellow fever virus helicase
Descriptor: Serine protease NS3
Authors:Smith, J.L.
Deposit date:2015-12-18
Release date:2015-12-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the Flavivirus helicase: implications for catalytic activity, protein interactions, and proteolytic processing.
J. Virol., 79, 2005
1QD9
DownloadVisualize
BU of 1qd9 by Molmil
Bacillus subtilis YABJ
Descriptor: ACETIC ACID, ETHYL MERCURY ION, MERCURY (II) ION, ...
Authors:Smith, J.L, Sinha, S, Rappu, P, Lange, S.C, Mantsala, P, Zalkin, H.
Deposit date:1999-07-09
Release date:1999-11-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Bacillus subtilis YabJ, a purine regulatory protein and member of the highly conserved YjgF family.
Proc.Natl.Acad.Sci.USA, 96, 1999
1GPH
DownloadVisualize
BU of 1gph by Molmil
STRUCTURE OF THE ALLOSTERIC REGULATORY ENZYME OF PURINE BIOSYNTHESIS
Descriptor: ADENOSINE MONOPHOSPHATE, GLUTAMINE PHOSPHORIBOSYL-PYROPHOSPHATE AMIDOTRANSFERASE, IRON/SULFUR CLUSTER
Authors:Smith, J.L.
Deposit date:1994-04-20
Release date:1994-07-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the allosteric regulatory enzyme of purine biosynthesis.
Science, 264, 1994
4V9E
DownloadVisualize
BU of 4v9e by Molmil
Crystal Structure of Rift Valley Fever Virus Nucleocapsid Protein Hexamer Bound to Single-stranded RNA.
Descriptor: 35-mer poly(U) RNA, Nucleocapsid protein
Authors:Raymond, D.D, Smith, J.L.
Deposit date:2012-09-19
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Phleboviruses encapsidate their genomes by sequestering RNA bases.
Proc.Natl.Acad.Sci.USA, 109, 2012
4O6D
DownloadVisualize
BU of 4o6d by Molmil
West Nile Virus Non-structural protein 1 (NS1) Form 1 crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NS1, ...
Authors:Akey, D.L, Smith, J.L.
Deposit date:2013-12-20
Release date:2014-02-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5936 Å)
Cite:Flavivirus NS1 structures reveal surfaces for associations with membranes and the immune system.
Science, 343, 2014
4O6B
DownloadVisualize
BU of 4o6b by Molmil
Dengue Type2 Virus Non-structural protein 1 (NS1) Form 1 crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Non-structural protein 1
Authors:Akey, D.L, Smith, J.L.
Deposit date:2013-12-20
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.0005 Å)
Cite:Flavivirus NS1 structures reveal surfaces for associations with membranes and the immune system.
Science, 343, 2014
7R7G
DownloadVisualize
BU of 7r7g by Molmil
Synechococcus Olefin Synthase FAAL domain A229I/R336A in complex with palmitoyl adenylate and pyrophosphate
Descriptor: ACETATE ION, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Sikkema, A.P, Strugis, R.M, Smith, J.L.
Deposit date:2021-06-24
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:An electrostatic fatty acid selection mechanism by the Olefin Synthase FAAL domain from Synechococcus sp. PCC7002
To Be Published
7R7F
DownloadVisualize
BU of 7r7f by Molmil
Synechococcus Olefin Synthase FAAL domain R336A in complex with stearoyl adenylate and pyrophosphate
Descriptor: ACETATE ION, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Sikkema, A.P, Strugis, R.M, Smith, J.L.
Deposit date:2021-06-24
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:An electrostatic fatty acid selection mechanism by the Olefin Synthase FAAL domain from Synechococcus sp. PCC7002
To Be Published
7R7E
DownloadVisualize
BU of 7r7e by Molmil
Synechococcus Olefin Synthase FAAL domain in complex with AMP and pyrophosphate
Descriptor: ACETATE ION, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Sikkema, A.P, Strugis, R.M, Smith, J.L.
Deposit date:2021-06-24
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:An electrostatic fatty acid selection mechanism by the Olefin Synthase FAAL domain from Synechococcus sp. PCC7002
To Be Published
6WEQ
DownloadVisualize
BU of 6weq by Molmil
DENV1 NS1 in complex with neutralizing 2B7 Fab fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2B7 Fab fragment heavy chain, 2B7 Fab fragment light chain, ...
Authors:Akey, D.L, Smith, J.L.
Deposit date:2020-04-02
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for antibody inhibition of flavivirus NS1-triggered endothelial dysfunction.
Science, 371, 2021
6D5X
DownloadVisualize
BU of 6d5x by Molmil
Structure of Human ATP:Cobalamin Adenosyltransferase bound to ATP, Adenosylcobalamin, and Triphosphate
Descriptor: 5'-DEOXYADENOSINE, ADENOSINE-5'-TRIPHOSPHATE, COBALAMIN, ...
Authors:Dodge, G.J, Campanello, G, Smith, J.L, Banerjee, R.
Deposit date:2018-04-19
Release date:2018-10-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Sacrificial Cobalt-Carbon Bond Homolysis in Coenzyme B12as a Cofactor Conservation Strategy.
J. Am. Chem. Soc., 140, 2018
6D6Y
DownloadVisualize
BU of 6d6y by Molmil
AprA Methyltransferase 2 - GNAT didomain in complex with SAH
Descriptor: AprA Methyltransferase 2, S-ADENOSYL-L-HOMOCYSTEINE, trimethylamine oxide
Authors:Sikkema, A.P, Smith, J.L.
Deposit date:2018-04-23
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.246 Å)
Cite:Biosynthesis of t-Butyl in Apratoxin A: Functional Analysis and Architecture of a PKS Loading Module.
ACS Chem. Biol., 13, 2018
6D5K
DownloadVisualize
BU of 6d5k by Molmil
Structure of Human ATP:Cobalamin Adenosyltransferase bound to ATP, and Adenosylcobalamin
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-DEOXYADENOSINE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Dodge, G.J, Campanello, G, Smith, J.L, Banerjee, R.
Deposit date:2018-04-19
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Sacrificial Cobalt-Carbon Bond Homolysis in Coenzyme B12as a Cofactor Conservation Strategy.
J. Am. Chem. Soc., 140, 2018
5VE4
DownloadVisualize
BU of 5ve4 by Molmil
Crystal structure of persulfide dioxygenase-rhodanese fusion protein with rhodanese domain inactivating mutation (C314S) from Burkholderia phytofirmans
Descriptor: BpPRF, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
Deposit date:2017-04-03
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017
5VE5
DownloadVisualize
BU of 5ve5 by Molmil
Crystal structure of persulfide dioxygenase rhodanese fusion protein with rhodanese domain inactivating mutation (C314S) from Burkholderia phytofirmans in complex with glutathione
Descriptor: BpPRF, CHLORIDE ION, FE (III) ION, ...
Authors:Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
Deposit date:2017-04-03
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017
5VE3
DownloadVisualize
BU of 5ve3 by Molmil
Crystal structure of wild-type persulfide dioxygenase-rhodanese fusion protein from Burkholderia phytofirmans
Descriptor: BpPRF, FE (III) ION
Authors:Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
Deposit date:2017-04-03
Release date:2017-07-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.793 Å)
Cite:Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon