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PDB: 76 件

4UAI
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Crystal structure of CXCL12 in complex with inhibitor
分子名称: 1-phenyl-3-[4-(1H-tetrazol-5-yl)phenyl]urea, SULFATE ION, Stromal cell-derived factor 1
著者Smith, E.W, Chen, Y.
登録日2014-08-09
公開日2014-11-12
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Analysis of a Novel Small Molecule Ligand Bound to the CXCL12 Chemokine.
J.Med.Chem., 57, 2014
7V01
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Staphylococcus epidermidis RP62a CRISPR short effector complex with self RNA target and ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZY
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Staphylococcus epidermidis RP62A CRISPR effector complex with non-self target RNA 2
分子名称: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7V02
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Staphylococcus epidermidis RP62A CRISPR short effector complex
分子名称: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (4.97 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZZ
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Staphylococcus epidermidis RP62a CRISPR tall effector complex
分子名称: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (4.45 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZW
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Staphylococcus epidermidis RP62a CRISPR effector subcomplex
分子名称: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm4, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZX
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Staphylococcus epidermidis RP62a CRISPR effector subcomplex with non-self target RNA bound
分子名称: CRISPR non-self RNA target, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm4, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7V00
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Staphylococcus epidermidis RP62a CRISPR tall effector complex with bound ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
5DEM
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Structure of Pseudomonas aeruginosa LpxA
分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, PHOSPHATE ION
著者Smith, E.W, Chen, Y.
登録日2015-08-25
公開日2015-09-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structures of Pseudomonas aeruginosa LpxA Reveal the Basis for Its Substrate Selectivity.
Biochemistry, 54, 2015
5DEP
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Structure of Pseudomonas aeruginosa LpxA in complex with UDP-GlcNAc
分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, PHOSPHATE ION, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Smith, E.W, Chen, Y.
登録日2015-08-25
公開日2015-09-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structures of Pseudomonas aeruginosa LpxA Reveal the Basis for Its Substrate Selectivity.
Biochemistry, 54, 2015
5DG3
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Structure of Pseudomonas aeruginosa LpxA in complex with UDP-3-O-(R-3-hydroxydecanoyl)-GlcNAc
分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, PHOSPHATE ION, uridine-5'-diphosphate-3-O-(R-3-hydroxydecanoyl)-N-acetyl-D-glucosamine
著者Smith, E.W, Chen, Y.
登録日2015-08-27
公開日2015-09-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of Pseudomonas aeruginosa LpxA Reveal the Basis for Its Substrate Selectivity.
Biochemistry, 54, 2015
1C5G
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PLASMINOGEN ACTIVATOR INHIBITOR-1
分子名称: PLASMINOGEN ACTIVATOR INHIBITOR-1
著者Goldsmith, E.J.
登録日1999-12-07
公開日1999-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Engineering of plasminogen activator inhibitor-1 to reduce the rate of latency transition.
Nat.Struct.Biol., 2, 1995
3UUO
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The discovery of potent, selectivity, and orally bioavailable pyrozoloquinolines as PDE10 inhibitors for the treatment of Schizophrenia
分子名称: 6-methoxy-3,8-dimethyl-4-(piperazin-1-yl)-1H-pyrazolo[3,4-b]quinoline, MAGNESIUM ION, PHOSPHATE ION, ...
著者Ho, G.D, Yang, S, Smotryski, J, Bercovici, A, Nechuta, T, Smith, E.M, McElroy, W, Tan, Z, Tulshian, D, Mckittrick, B, Greenlee, W.J, Hruza, A, Xiao, L, Rindgen, D, Guzzi, M, Zhang, X, Bleickardt, C, Mullins, D, Hodgson, R.
登録日2011-11-28
公開日2012-01-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献The discovery of potent, selective, and orally active pyrazoloquinolines as PDE10A inhibitors for the treatment of Schizophrenia.
Bioorg.Med.Chem.Lett., 22, 2012
5N0G
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Crystal Structure of CobH T85A (precorrin-8x methyl mutase) complexed with C5 allyl-HBA
分子名称: 3-[(1~{R},2~{S},3~{S},4~{Z},7~{S},8~{S},9~{Z},15~{R},17~{R},18~{R},19~{R})-2,7,18-tris(2-hydroxy-2-oxoethyl)-3,13,17-tris(3-hydroxy-3-oxopropyl)-1,2,7,12,12,15,17-heptamethyl-5-prop-2-enyl-3,8,15,18,19,21-hexahydrocorrin-8-yl]propanoic acid, GLYCEROL, Precorrin-8X methylmutase
著者Nemoto-Smith, E.H, Lawrence, A.D, Brown, D.G, Warren, M.J.
登録日2017-02-02
公開日2018-02-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Novel cobalamin analogues and their application in the trafficking of cobalamin in bacteria, worms and plants
To Be Published
8FE5
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Structure of J-PKAc chimera complexed with Aplithianine B
分子名称: 6-[(6P)-6-(1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-7,9-dihydro-8H-purin-8-one, DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
著者Du, L, Wilson, B.A.P, Li, N, Martinez Fiesco, J.A, Dalilian, M, Wang, D, Smith, E.A, Wamiru, A, Goncharova, E.I, Zhang, P, O'Keefe, B.R.
登録日2022-12-05
公開日2023-10-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Discovery and Synthesis of a Naturally Derived Protein Kinase Inhibitor that Selectively Inhibits Distinct Classes of Serine/Threonine Kinases.
J.Nat.Prod., 86, 2023
8FEC
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Structure of J-PKAc chimera complexed with Aplithianine derivative
分子名称: 6-[(6P)-6-(4-bromo-1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-7H-purine, DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
著者Du, L, Wilson, B.A.P, Li, N, Martinez Fiesco, J.A, Dalilian, M, Wang, D, Smith, E.A, Wamiru, A, Goncharova, E.I, Zhang, P, O'Keefe, B.R.
登録日2022-12-06
公開日2023-10-18
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery and Synthesis of a Naturally Derived Protein Kinase Inhibitor that Selectively Inhibits Distinct Classes of Serine/Threonine Kinases.
J.Nat.Prod., 86, 2023
8FE2
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Structure of J-PKAc chimera complexed with Aplithianine A
分子名称: 6-[(6M)-6-(1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-9H-purine, DnaJ homolog subfamily B member 1, cAMP-dependent protein kinase catalytic subunit alpha, ...
著者Du, L, Wilson, B.A.P, Li, N, Dalilian, M, Wang, D, Martinez Fiesco, J.A, Smith, E.A, Wamiru, A, Goncharova, E.I, Zhang, P, O'Keefe, B.R.
登録日2022-12-05
公開日2023-10-18
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Discovery and Synthesis of a Naturally Derived Protein Kinase Inhibitor that Selectively Inhibits Distinct Classes of Serine/Threonine Kinases.
J.Nat.Prod., 86, 2023
5I2X
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Crystal Structure of TPP1 K170del
分子名称: Adrenocortical dysplasia protein homolog
著者Nandakumar, J, Smith, E.
登録日2016-02-09
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and functional consequences of a disease mutation in the telomere protein TPP1.
Proc.Natl.Acad.Sci.USA, 113, 2016
5WIR
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Structure of the TRF1-TERB1 interface
分子名称: TERB1-TBM, Telomeric repeat-binding factor 1
著者Nandakumar, J, Pendlebury, D.F, Smith, E.M, Tesmer, V.M.
登録日2017-07-20
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Dissecting the telomere-inner nuclear membrane interface formed in meiosis.
Nat. Struct. Mol. Biol., 24, 2017
5I2Y
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Crystal Structure of TPP1 K170A
分子名称: Adrenocortical dysplasia protein homolog
著者Nandakumar, J, Smith, E.M.
登録日2016-02-09
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and functional consequences of a disease mutation in the telomere protein TPP1.
Proc.Natl.Acad.Sci.USA, 113, 2016
7UUW
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Cryogenic electron microscopy 3D map of F-actin bound by the Actin Binding Domain of alpha-catenin ortholog, HMP1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Rangarajan, E.S, Smith, E.W, Izard, T.
登録日2022-04-29
公開日2023-01-18
最終更新日2023-01-25
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献The nematode alpha-catenin ortholog, HMP1, has an extended alpha-helix when bound to actin filaments.
J.Biol.Chem., 299, 2022
7UXF
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Cryogenic electron microscopy 3D map of F-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Rangarajan, E.S, Smith, E.W, Izard, T.
登録日2022-05-05
公開日2023-03-08
最終更新日2023-03-29
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Distinct inter-domain interactions of dimeric versus monomeric alpha-catenin link cell junctions to filaments.
Commun Biol, 6, 2023
7UTJ
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Cryogenic electron microscopy 3D map of F-actin bound by human dimeric alpha-catenin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Rangarajan, E.S, Smith, E.W, Izard, T.
登録日2022-04-27
公開日2023-03-08
最終更新日2023-03-29
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Distinct inter-domain interactions of dimeric versus monomeric alpha-catenin link cell junctions to filaments.
Commun Biol, 6, 2023
1T9P
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Crystal Structure of V44A, G45P Cp Rubredoxin
分子名称: FE (III) ION, Rubredoxin
著者Park, I.Y, Eidsness, M.K, Lin, I.J, Gebel, E.B, Youn, B, Harley, J.L, Machonkin, T.E, Frederick, R.O, Markley, J.L, Smith, E.T, Ichiye, T, Kang, C.
登録日2004-05-18
公開日2004-10-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential.
Proteins, 57, 2004
1T9O
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Crystal Structure of V44G Cp Rubredoxin
分子名称: FE (III) ION, Rubredoxin
著者Park, I.Y, Eidsness, M.K, Lin, I.J, Gebel, E.B, Youn, B, Harley, J.L, Machonkin, T.E, Frederick, R.O, Markley, J.L, Smith, E.T, Ichiye, T, Kang, C.
登録日2004-05-18
公開日2004-10-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential.
Proteins, 57, 2004

 

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