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PDB: 26 results

7ZU0
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HOPS tethering complex from yeast
Descriptor: E3 ubiquitin-protein ligase PEP5, Vacuolar membrane protein PEP3, Vacuolar morphogenesis protein 6, ...
Authors:Shvarev, D, Schoppe, J, Koenig, C, Perz, A, Fuellbrunn, N, Kiontke, S, Langemeyer, L, Januliene, D, Schnelle, K, Kuemmel, D, Froehlich, F, Moeller, A, Ungermann, C.
Deposit date:2022-05-11
Release date:2022-09-28
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structure of the HOPS tethering complex, a lysosomal membrane fusion machinery.
Elife, 11, 2022
8QX8
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BU of 8qx8 by Molmil
Endosomal membrane tethering complex CORVET
Descriptor: E3 ubiquitin-protein ligase PEP5, Vacuolar membrane protein PEP3, Vacuolar protein sorting-associated protein 16, ...
Authors:Shvarev, D, Ungermann, C, Moeller, A.
Deposit date:2023-10-23
Release date:2024-07-03
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structure of the endosomal CORVET tethering complex.
Nat Commun, 15, 2024
9EMN
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BU of 9emn by Molmil
Glucose-6-phosphate dehydrogenase (G6PDH) from Synechocystis sp. PCC 6803
Descriptor: Glucose-6-phosphate 1-dehydrogenase
Authors:Shvarev, D.
Deposit date:2024-03-08
Release date:2024-12-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of the allosteric regulation of cyanobacterial glucose-6-phosphate dehydrogenase by the redox sensor OpcA.
Proc.Natl.Acad.Sci.USA, 121, 2024
9EMM
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Glucose-6-phosphate dehydrogenase (G6PDH) in complex with protein OpcA from Synechocystis sp. PCC 6803
Descriptor: Glucose-6-phosphate 1-dehydrogenase, Putative OxPP cycle protein OpcA
Authors:Shvarev, D.
Deposit date:2024-03-08
Release date:2024-12-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of the allosteric regulation of cyanobacterial glucose-6-phosphate dehydrogenase by the redox sensor OpcA.
Proc.Natl.Acad.Sci.USA, 121, 2024
8OSH
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BU of 8osh by Molmil
AAA+ motor subunit ChlI of magnesium chelatase, pentamer spring-washer-like conformation
Descriptor: Magnesium-chelatase subunit ChlI
Authors:Shvarev, D, Moeller, A.
Deposit date:2023-04-18
Release date:2023-09-06
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Conformational variability of cyanobacterial ChlI, the AAA+ motor of magnesium chelatase involved in chlorophyll biosynthesis.
Mbio, 14, 2023
8OSF
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BU of 8osf by Molmil
AAA+ motor subunit ChlI of magnesium chelatase, hexamer conformation A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Shvarev, D, Moeller, A.
Deposit date:2023-04-18
Release date:2023-09-06
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Conformational variability of cyanobacterial ChlI, the AAA+ motor of magnesium chelatase involved in chlorophyll biosynthesis.
Mbio, 14, 2023
8OSG
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BU of 8osg by Molmil
AAA+ motor subunit ChlI of magnesium chelatase, hexamer conformation B
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Shvarev, D, Moeller, A.
Deposit date:2023-04-18
Release date:2023-09-06
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Conformational variability of cyanobacterial ChlI, the AAA+ motor of magnesium chelatase involved in chlorophyll biosynthesis.
Mbio, 14, 2023
9FUY
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BU of 9fuy by Molmil
MsbA in UDM inward-facing wide open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FV3
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BU of 9fv3 by Molmil
MsbA in MSP2N2 Nanodisc inward-facing narrow open
Descriptor: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FUW
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BU of 9fuw by Molmil
MsbA in Triton inward-facing wide (+) open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FV8
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BU of 9fv8 by Molmil
MsbA in Amphipol 18 inward-facing wide open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FUZ
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BU of 9fuz by Molmil
MsbA in UDM inward-facing wide (+) open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FVA
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BU of 9fva by Molmil
MsbA in MSP2N2 Nanodisc inward-facing wide open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FUU
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BU of 9fuu by Molmil
MsbA in GDN inward-facing wide open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FV7
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BU of 9fv7 by Molmil
MsbA in Amphipol A8-35 inward-facing wide (+) open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FV4
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MsbA in peptidisc inward-facing narrow (-) open
Descriptor: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FUQ
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MsbA in DDM inward-facing wide open
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FV5
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MsbA in peptidisc inward-facing narrow open
Descriptor: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FV2
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MsbA in MSP1E3D1 Nanodisc inward-facing narrow open
Descriptor: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FV1
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MsbA in MSP1D1 (EPL:PC) Nanodisc inward-facing narrow open
Descriptor: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FUS
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MsbA in LMNG inward-facing wide open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FUT
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BU of 9fut by Molmil
MsbA in GDN inward-facing narrow
Descriptor: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FV6
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MsbA in Amphipol A8-35 inward-facing wide open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FUV
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MsbA in Triton inward-facing wide open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025
9FV9
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MsbA in Amphipol 18 inward-facing wide (+) open
Descriptor: ATP-dependent lipid A-core flippase
Authors:Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
Deposit date:2024-06-26
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The ABC transporter MsbA in a dozen environments.
Structure, 2025

 

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PDB entries from 2025-04-16

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