2DRS
| Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263S mutant | Descriptor: | GLYCEROL, NICKEL (II) ION, Xylanase Y | Authors: | Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M. | Deposit date: | 2006-06-12 | Release date: | 2006-06-27 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural explanation for the acquisition of glycosynthase activity J.Biochem., 2009
|
|
2DRO
| Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263C mutant | Descriptor: | GLYCEROL, NICKEL (II) ION, Xylanase Y | Authors: | Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M. | Deposit date: | 2006-06-12 | Release date: | 2006-06-27 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structural explanation for the acquisition of glycosynthase activity J.Biochem., 2009
|
|
2DRQ
| Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263G mutant | Descriptor: | GLYCEROL, NICKEL (II) ION, Xylanase Y | Authors: | Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M. | Deposit date: | 2006-06-12 | Release date: | 2006-06-27 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural explanation for the acquisition of glycosynthase activity J.Biochem., 2009
|
|
1UK6
| Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with propionate | Descriptor: | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, PROPANOIC ACID | Authors: | Fushinobu, S, Jun, S.-Y, Hidaka, M, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T. | Deposit date: | 2003-08-19 | Release date: | 2004-09-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
|
|
1UK8
| Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with n-valerate | Descriptor: | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, PENTANOIC ACID | Authors: | Fushinobu, S, Jun, S.-Y, Hidaka, M, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T. | Deposit date: | 2003-08-19 | Release date: | 2004-09-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
|
|
1UK7
| Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with n-butyrate | Descriptor: | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, butanoic acid | Authors: | Fushinobu, S, Jun, S.-Y, Hidaka, M, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T. | Deposit date: | 2003-08-19 | Release date: | 2004-09-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
|
|
1UKA
| Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with (S)-2-methylbutyrate | Descriptor: | 2-METHYLBUTANOIC ACID, 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase | Authors: | Fushinobu, S, Jun, S.-Y, Hidaka, M, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T. | Deposit date: | 2003-08-19 | Release date: | 2004-09-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
|
|
1UKB
| Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with benzoate | Descriptor: | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, BENZOIC ACID | Authors: | Fushinobu, S, Jun, S.-Y, Hidaka, M, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T. | Deposit date: | 2003-08-19 | Release date: | 2004-09-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
|
|
1UK9
| Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with isovalerate | Descriptor: | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, ISOVALERIC ACID | Authors: | Fushinobu, S, Jun, S.-Y, Hidaka, M, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T. | Deposit date: | 2003-08-19 | Release date: | 2004-09-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
|
|
1UMG
| Crystal structure of fructose-1,6-bisphosphatase | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM), 385aa long conserved hypothetical protein, ... | Authors: | Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T. | Deposit date: | 2003-09-30 | Release date: | 2004-07-13 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The first crystal structure of the novel class of fructose-1,6-bisphosphatase present in thermophilic archaea. Structure, 12, 2004
|
|
1J30
| The crystal structure of sulerythrin, a rubrerythrin-like protein from a strictly aerobic and thermoacidiphilic archaeon | Descriptor: | 144aa long hypothetical rubrerythrin, FE (III) ION, OXYGEN MOLECULE, ... | Authors: | Fushinobu, S, Shoun, H, Wakagi, T. | Deposit date: | 2003-01-16 | Release date: | 2003-10-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | The Crystal Structure of Sulerythrin, A Rubrerythrin-like Protein from A Strictly Aerobic Archaeon, Sulfolobus tokodaii strain 7, shows unexpected domain swapping Biochemistry, 42, 2003
|
|
2D44
| Crystal structure of arabinofuranosidase complexed with arabinofuranosyl-alpha-1,2-xylobiose | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-L-arabinofuranose-(1-2)-alpha-D-xylopyranose-(1-4)-alpha-D-xylopyranose, alpha-L-arabinofuranosidase B | Authors: | Miyanaga, A, Koseki, T, Miwa, Y, Matsuzawa, H, Wakagi, T, Shoun, H, Fushinobu, S. | Deposit date: | 2005-10-07 | Release date: | 2006-09-19 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | The family 42 carbohydrate-binding module of family 54 alpha-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose Biochem.J., 399, 2006
|
|
2D43
| Crystal structure of arabinofuranosidase complexed with arabinotriose | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose, alpha-L-arabinofuranosidase B | Authors: | Miyanaga, A, Koseki, T, Miwa, Y, Matsuzawa, H, Wakagi, T, Shoun, H, Fushinobu, S. | Deposit date: | 2005-10-07 | Release date: | 2006-09-19 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | The family 42 carbohydrate-binding module of family 54 alpha-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose Biochem.J., 399, 2006
|
|
2E2N
| Crystal structure of Sulfolobus tokodaii hexokinase in the apo form | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEXOKINASE, SULFATE ION | Authors: | Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T. | Deposit date: | 2006-11-15 | Release date: | 2007-01-16 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii. J.Biol.Chem., 282, 2007
|
|
2E2O
| Crystal structure of Sulfolobus tokodaii hexokinase in complex with glucose | Descriptor: | HEXOKINASE, beta-D-glucopyranose | Authors: | Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T. | Deposit date: | 2006-11-15 | Release date: | 2007-01-16 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii. J.Biol.Chem., 282, 2007
|
|
2E2P
| Crystal structure of Sulfolobus tokodaii hexokinase in complex with ADP | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, HEXOKINASE, ... | Authors: | Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T. | Deposit date: | 2006-11-15 | Release date: | 2007-01-16 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii. J.Biol.Chem., 282, 2007
|
|
2E2Q
| Crystal structure of Sulfolobus tokodaii hexokinase in complex with xylose, Mg2+, and ADP | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, HEXOKINASE, MAGNESIUM ION, ... | Authors: | Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T. | Deposit date: | 2006-11-15 | Release date: | 2007-01-16 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii. J.Biol.Chem., 282, 2007
|
|
3ABA
| Crystal structure of CYP105P1 in complex with filipin I | Descriptor: | (3R,4S,6S,8S,10R,12R,14R,16S,17E,19E,21E,23E,25E,28R)-3-hexyl-4,6,8,10,12,14,16-heptahydroxy-17,28-dimethyloxacyclooctacosa-17,19,21,23,25-pentaen-2-one, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, ... | Authors: | Xu, L.H, Fushinobu, S, Takamatsu, S, Wakagi, T, Ikeda, H, Shoun, H. | Deposit date: | 2009-12-04 | Release date: | 2010-04-07 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Regio- and stereospecificity of filipin hydroxylation sites revealed by crystal structures of cytochrome P450 105P1 and 105D6 from Streptomyces avermitilis J.Biol.Chem., 285, 2010
|
|
3AHG
| H64A mutant of Phosphoketolase from Bifidobacterium Breve complexed with a tricyclic ring form of thiamine diphosphate | Descriptor: | 1,2-ETHANEDIOL, 2-[(9aR)-2,7-dimethyl-9a,10-dihydro-5H-pyrimido[4,5-d][1,3]thiazolo[3,2-a]pyrimidin-8-yl]ethyl trihydrogen diphosphate, MAGNESIUM ION, ... | Authors: | Suzuki, R, Katayama, T, Kim, B.-J, Wakagi, T, Shoun, H, Ashida, H, Yamamoto, K, Fushinobu, S. | Deposit date: | 2010-04-22 | Release date: | 2010-08-25 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal Structures of phosphoketolase: thiamine diphosphate-dependent dehydration mechanism J.Biol.Chem., 285, 2010
|
|
3ABB
| Crystal structure of CYP105D6 | Descriptor: | Cytochrome P450 hydroxylase, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Xu, L.H, Fushinobu, S, Takamatsu, S, Wakagi, T, Ikeda, H, Shoun, H. | Deposit date: | 2009-12-04 | Release date: | 2010-04-07 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Regio- and stereospecificity of filipin hydroxylation sites revealed by crystal structures of cytochrome P450 105P1 and 105D6 from Streptomyces avermitilis J.Biol.Chem., 285, 2010
|
|
3AHI
| H320A mutant of Phosphoketolase from Bifidobacterium Breve complexed with acetyl thiamine diphosphate | Descriptor: | 1,2-ETHANEDIOL, 2-ACETYL-THIAMINE DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Suzuki, R, Katayama, T, Kim, B.-J, Wakagi, T, Shoun, H, Ashida, H, Yamamoto, K, Fushinobu, S. | Deposit date: | 2010-04-22 | Release date: | 2010-08-25 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal Structures of phosphoketolase: thiamine diphosphate-dependent dehydration mechanism J.Biol.Chem., 285, 2010
|
|
3AHD
| Phosphoketolase from Bifidobacterium Breve complexed with 2-acetyl-thiamine diphosphate | Descriptor: | 1,2-ETHANEDIOL, 2-ACETYL-THIAMINE DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Suzuki, R, Katayama, T, Kim, B.-J, Wakagi, T, Shoun, H, Ashida, H, Yamamoto, K, Fushinobu, S. | Deposit date: | 2010-04-22 | Release date: | 2010-08-25 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal Structures of phosphoketolase: thiamine diphosphate-dependent dehydration mechanism J.Biol.Chem., 285, 2010
|
|
3AHF
| Phosphoketolase from Bifidobacterium Breve complexed with inorganic phosphate | Descriptor: | GLYCEROL, MAGNESIUM ION, PHOSPHATE ION, ... | Authors: | Suzuki, R, Katayama, T, Kim, B.-J, Wakagi, T, Shoun, H, Ashida, H, Yamamoto, K, Fushinobu, S. | Deposit date: | 2010-04-22 | Release date: | 2010-08-25 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal Structures of phosphoketolase: thiamine diphosphate-dependent dehydration mechanism J.Biol.Chem., 285, 2010
|
|
3AHH
| H142A mutant of Phosphoketolase from Bifidobacterium Breve complexed with acetyl thiamine diphosphate | Descriptor: | 1,2-ETHANEDIOL, 2-ACETYL-THIAMINE DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Suzuki, R, Katayama, T, Kim, B.-J, Wakagi, T, Shoun, H, Ashida, H, Yamamoto, K, Fushinobu, S. | Deposit date: | 2010-04-22 | Release date: | 2010-08-25 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal Structures of phosphoketolase: thiamine diphosphate-dependent dehydration mechanism J.Biol.Chem., 285, 2010
|
|
3AHC
| Resting form of Phosphoketolase from Bifidobacterium Breve | Descriptor: | 1,2-ETHANEDIOL, MAGNESIUM ION, NONAETHYLENE GLYCOL, ... | Authors: | Suzuki, R, Katayama, T, Kim, B.-J, Wakagi, T, Shoun, H, Ashida, H, Yamamoto, K, Fushinobu, S. | Deposit date: | 2010-04-22 | Release date: | 2010-08-25 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal Structures of phosphoketolase: thiamine diphosphate-dependent dehydration mechanism J.Biol.Chem., 285, 2010
|
|