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PDB: 63 results

6U5K
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BU of 6u5k by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - baseplate
Descriptor: Glue PA0627, Sheath Initiator PA0617, Sheath PA0622, ...
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5F
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BU of 6u5f by Molmil
CryoEM Structure of Pyocin R2 - precontracted - collar
Descriptor: Collar PA0615, Sheath PA0622, Tube PA0623
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5J
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BU of 6u5j by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - collar
Descriptor: Collar PA0615, Sheath PA0622
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
2FKK
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BU of 2fkk by Molmil
Crystal structure of the C-terminal domain of the bacteriophage T4 gene product 10
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BROMIDE ION, ...
Authors:Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2006-01-04
Release date:2006-04-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Evolution of bacteriophage tails: structure of t4 gene product 10
J.Mol.Biol., 358, 2006
6U5H
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BU of 6u5h by Molmil
CryoEM Structure of Pyocin R2 - precontracted - hub
Descriptor: Probable bacteriophage protein Pyocin R2
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6PYT
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BU of 6pyt by Molmil
CryoEM Structure of Pyocin R2 - precontracted - trunk
Descriptor: Pyocin sheath PA0622, Pyocin tube PA0623
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-07-30
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
5W6H
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BU of 5w6h by Molmil
Crystal structure of Bacteriophage CBA120 tailspike protein 4 enzymatically active domain (TSP4dN, orf213)
Descriptor: ACETATE ION, CHLORIDE ION, POTASSIUM ION, ...
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-16
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.289 Å)
Cite:Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120.
J.Mol.Biol., 431, 2019
5W6P
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BU of 5w6p by Molmil
Crystal structure of Bacteriophage CBA120 tailspike protein 2 enzymatically active domain (TSP2dN, orf211)
Descriptor: 1,2-ETHANEDIOL, POTASSIUM ION, ZINC ION, ...
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-16
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.335 Å)
Cite:Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120.
J.Mol.Biol., 431, 2019
5W6S
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BU of 5w6s by Molmil
Crystal structure of Bacteriophage CBA120 tailspike protein 2 enzymatically active domain (TSP2dN, orf211) complex with Escherichia Coli O157-antigen
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, POTASSIUM ION, ...
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-16
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.263 Å)
Cite:Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120.
J.Mol.Biol., 431, 2019
5W6F
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BU of 5w6f by Molmil
Crystal structure of Bacteriophage CBA120 tailspike protein 3 (TSP3, orf212)
Descriptor: CHLORIDE ION, tailspike protein 3
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-16
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120.
J.Mol.Biol., 431, 2019
5W5P
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BU of 5w5p by Molmil
Crystal structure of Acinetobacter baumannii phage AM24 tailspike protein
Descriptor: Tail fiber protein, ZINC ION
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-15
Release date:2018-12-19
Method:X-RAY DIFFRACTION (2.429 Å)
Cite:Crystal structure of Acinetobacter baumannii phage AM24 tailspike protein
To be Published
4JIW
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BU of 4jiw by Molmil
c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
Descriptor: CHLORIDE ION, MAGNESIUM ION, Putative uncharacterized protein, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2013-03-07
Release date:2013-08-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.402 Å)
Cite:PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
6RJU
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BU of 6rju by Molmil
C-terminal domain of TssA protein from T6SS of Escherichia coli.
Descriptor: Putative type VI secretion protein
Authors:Nazarov, S, Shneider, M, Basler, M, Leiman, P.
Deposit date:2019-04-29
Release date:2020-06-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of TssA protein from Type VI secretion system of E. coli.
To Be Published
6E0V
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BU of 6e0v by Molmil
Apo crystal structure of the colanidase tailspike protein gp150 of Phage Phi92
Descriptor: 1,2-ETHANEDIOL, Bacteriophage Phi92 gp150, CHLORIDE ION, ...
Authors:Leiman, P.G, Browning, C, Gerardy-Schahn, R, Shneider, M.M, Plattner, M, Schwarzer, D.
Deposit date:2018-07-07
Release date:2019-07-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
To Be Published
6E1R
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BU of 6e1r by Molmil
Crystal structure of the Acinetobacter phage vB_ApiP_P1 tailspike protein
Descriptor: CHLORIDE ION, SODIUM ION, Tailspike protein
Authors:Plattner, M, Shneider, M.M, Oliveira, H, Azeredo, J, Leiman, P.G.
Deposit date:2018-07-10
Release date:2019-07-17
Method:X-RAY DIFFRACTION (2.693 Å)
Cite:Crystal structure of the Acinetobacter phage vB_ApiP_P1 tailspike protein
To Be Published
6E0W
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BU of 6e0w by Molmil
Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
Descriptor: 1,2-ETHANEDIOL, 1,5-anhydro-4,6-O-[(1R)-1-carboxyethylidene]-D-galactitol, Bacteriophage Phi92 gp150, ...
Authors:Plattner, M, Browning, C, Gerardy-Schahn, R, Shneider, M.M, Leiman, P.G, Schwarzer, D.
Deposit date:2018-07-07
Release date:2019-07-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
To Be Published
6ET6
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BU of 6et6 by Molmil
Crystal structure of muramidase from Acinetobacter baumannii AB 5075UW prophage
Descriptor: GLYCEROL, Lysozyme, SULFATE ION
Authors:Boyko, K.M, Nikolaeva, A.Y, Sykilinda, N.N, Shneider, M.M, Miroshnikov, K.A, Popov, V.O.
Deposit date:2017-10-25
Release date:2018-09-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of anAcinetobacterBroad-Range Prophage Endolysin Reveals a C-Terminal alpha-Helix with the Proposed Role in Activity against Live Bacterial Cells.
Viruses, 10, 2018
6EU4
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BU of 6eu4 by Molmil
Structure of Acinetobacter phage vb_AbaP_AS12 gp42 tailspike
Descriptor: Tail spike protein, ZINC ION
Authors:Taylor, N.M.I, Shneider, M.M, Leiman, P.G.
Deposit date:2017-10-27
Release date:2018-11-07
Method:X-RAY DIFFRACTION (1.794 Å)
Cite:Structure of Acinetobacter phage vb_AbaP_AS12 gp42 tailspike
To Be Published
4S37
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BU of 4s37 by Molmil
Crystal structure of R2 pyocin membrane-piercing spike
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Browning, C.B, Leiman, P.G, Shneider, M.M.
Deposit date:2015-01-26
Release date:2016-01-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of R2 pyocin membrane-piercing spike
To be Published
4MTK
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BU of 4mtk by Molmil
Crystal structure of PA0091 VgrG1, the central spike of the Type VI Secretion System
Descriptor: SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE, VgrG1
Authors:Sycheva, L.V, Shneider, M.M, Leiman, P.G.
Deposit date:2013-09-19
Release date:2014-10-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.322 Å)
Cite:The conserved architecture of the T6SS central spike complex
To be Published
6C72
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BU of 6c72 by Molmil
Crystal structure of a tailspike protein gp49 from Acinetobacter baumannii bacteriophage Fri1, a capsular polysaccharide depolymerase
Descriptor: Particle-associated glycoside hydrolase, ZINC ION
Authors:Buth, S.A, Garcon, A, Popova, A.V, Shneider, M.M, Leiman, P.G.
Deposit date:2018-01-19
Release date:2019-01-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Exopolysaccharide degrading enzymes - specificity determinants of Acinetobacter baumannii phages
To Be Published
6CL5
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BU of 6cl5 by Molmil
Structure of P. aeruginosa R1 pyocin fiber PALES_06171 comprising C-terminal residues 323-701
Descriptor: FE (III) ION, MAGNESIUM ION, SODIUM ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2018-03-01
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.324 Å)
Cite:Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers.
Viruses, 10, 2018
6CL6
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BU of 6cl6 by Molmil
Structure of P. aeruginosa R2 pyocin fiber PA0620 comprising C-terminal residues 323-691
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, FE (III) ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2018-03-01
Release date:2018-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers.
Viruses, 10, 2018
4JIV
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BU of 4jiv by Molmil
VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
Descriptor: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2013-03-07
Release date:2013-08-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
4KU0
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BU of 4ku0 by Molmil
Enterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragment
Descriptor: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, FE (III) ION, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2013-05-21
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystall structute of the business end of the T4 cell-puncturing device
To be Published

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PDB entries from 2024-05-15

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