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PDB: 2087 results

2YUW
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Solution Structure of 2nd Fibronectin Domain of Slow Type Myosin-Binding Protein C
Descriptor: Myosin binding protein C, slow type
Authors:Niraula, T.N, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of 2nd Fibronectin Domain of Slow Type Myosin-Binding Protein C
To be Published
2YRZ
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BU of 2yrz by Molmil
Solution structure of the fibronectin type III domain of human Integrin beta-4
Descriptor: Integrin beta-4
Authors:Abe, H, Sasagawa, A, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the fibronectin type III domain of human Integrin beta-4
To be Published
2YRO
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BU of 2yro by Molmil
Solution structure of the C-terminal Gal-bind lectin protein from Human Galectin-8
Descriptor: Galectin-8
Authors:Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2008-02-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C-terminal Gal-bind lectin protein from Human Galectin-8
To be Published
2YZ7
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X-ray analyses of 3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis
Descriptor: CALCIUM ION, CHLORIDE ION, D-3-hydroxybutyrate dehydrogenase
Authors:Hoque, M.M, Juan, E.C.M, Shimizu, S, Hossain, M.T, Takenaka, A.
Deposit date:2007-05-04
Release date:2008-04-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The structures of Alcaligenes faecalisD-3-hydroxybutyrate dehydrogenase before and after NAD(+) and acetate binding suggest a dynamical reaction mechanism as a member of the SDR family.
Acta Crystallogr.,Sect.D, 64, 2008
2YUV
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BU of 2yuv by Molmil
Solution Structure of 2nd Immunoglobulin Domain of Slow Type Myosin-Binding Protein C
Descriptor: Myosin-binding protein C, slow-type
Authors:Niraula, T.N, Tochio, N, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of 2nd Immunoglobulin Domain of Slow Type Myosin-Binding Protein C
To be Published
2YUL
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BU of 2yul by Molmil
Solution structure of the HMG box of human Transcription factor SOX-17
Descriptor: Transcription factor SOX-17
Authors:Abe, H, Tochio, N, Miyamoto, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the HMG box of human Transcription factor SOX-17
To be Published
2YUS
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Solution structure of the SANT domain of human SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 1
Descriptor: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 1
Authors:Tochio, N, Koshiba, S, Satio, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SANT domain of human SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 1
To be Published
1WZI
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BU of 1wzi by Molmil
Structural basis for alteration of cofactor specificity of Malate dehydrogenase from Thermus flavus
Descriptor: Malate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Tomita, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
Deposit date:2005-03-05
Release date:2006-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for alteration of cofactor specificity of malate dehydrogenase from Thermus flavus
to be published
1UF4
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BU of 1uf4 by Molmil
Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase
Descriptor: N-carbamyl-D-amino acid amidohydrolase
Authors:Hashimoto, H, Aoki, M, Shimizu, T, Nakai, T, Morikawa, H, Ikenaka, Y, Takahashi, S, Sato, M.
Deposit date:2003-05-23
Release date:2004-06-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid
To be published
1UF7
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BU of 1uf7 by Molmil
Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase complexed with N-carbamyl-D-valine
Descriptor: 3-METHYL-2-UREIDO-BUTYRIC ACID, N-carbamyl-D-amino acid amidohydrolase
Authors:Hashimoto, H, Aoki, M, Shimizu, T, Nakai, T, Morikawa, H, Ikenaka, Y, Takahashi, S, Sato, M.
Deposit date:2003-05-26
Release date:2004-06-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase
To be published
5O4N
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Apo HcgC from Methanococcus maripaludis soaked with SAH and pyridinol
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-carboxy methyl-4-hydroxy-2-pyridinol, DIMETHYL SULFOXIDE, ...
Authors:Wagner, T, Bai, L, Xu, T, Hu, X, Ermler, U, Shima, S.
Deposit date:2017-05-29
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A Water-Bridged H-Bonding Network Contributes to the Catalysis of the SAM-Dependent C-Methyltransferase HcgC.
Angew. Chem. Int. Ed. Engl., 56, 2017
5YJI
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Co-crystal structure of Mouse Nicotinamide N-methyltransferase (NNMT) with small molecule analog of Nicotinamide
Descriptor: 6-methoxy-1-methyl-2H-pyridine-3-carboxamide, Nicotinamide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Birudukota, S, Swaminathan, S, Thakur, M.K, Parveen, R, Kandan, S, Hallur, M.S, Rajagopal, S, Ruf, S, Dhakshinamoorthy, S, Kannt, A, Gosu, R.
Deposit date:2017-10-10
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:A small molecule inhibitor of Nicotinamide N-methyltransferase for the treatment of metabolic disorders.
Sci Rep, 8, 2018
5YJF
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BU of 5yjf by Molmil
Co-crystal structure of Human Nicotinamide N-methyltransferase (NNMT) with small molecule analog of Nicotinamide
Descriptor: 6-methoxy-1-methyl-2H-pyridine-3-carboxamide, Nicotinamide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Swaminathan, S, Birudukota, S, Thakur, M.K, Parveen, R, Kandan, S, Hallur, M.S, Rajagopal, S, Ruf, S, Dhakshinamoorthy, S, Kannt, A, Gosu, R.
Deposit date:2017-10-10
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:A small molecule inhibitor of Nicotinamide N-methyltransferase for the treatment of metabolic disorders.
Sci Rep, 8, 2018
5ODI
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BU of 5odi by Molmil
Heterodisulfide reductase / [NiFe]-hydrogenase complex from Methanothermococcus thermolithotrophicus cocrystallized with CoM-SH
Descriptor: 1-THIOETHANESULFONIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:Wagner, T, Koch, J, Ermler, U, Shima, S.
Deposit date:2017-07-05
Release date:2017-08-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction.
Science, 357, 2017
5O4H
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HcgC from Methanococcus maripaludis cocrystallized with SAM and pyridinol
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ACETATE ION, HcgC, ...
Authors:Wagner, T, Bai, L, Xu, T, Hu, X, Ermler, U, Shima, S.
Deposit date:2017-05-29
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Water-Bridged H-Bonding Network Contributes to the Catalysis of the SAM-Dependent C-Methyltransferase HcgC.
Angew. Chem. Int. Ed. Engl., 56, 2017
5ODR
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BU of 5odr by Molmil
Heterodisulfide reductase / [NiFe]-hydrogenase complex from Methanothermococcus thermolithotrophicus soaked with heterodisulfide for 2 minutes.
Descriptor: 1-THIOETHANESULFONIC ACID, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETATE ION, ...
Authors:Wagner, T, Koch, J, Ermler, U, Shima, S.
Deposit date:2017-07-06
Release date:2017-08-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction.
Science, 357, 2017
5ODC
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BU of 5odc by Molmil
Heterodisulfide reductase / [NiFe]-hydrogenase complex from Methanothermococcus thermolithotrophicus at 2.3 A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETATE ION, ...
Authors:Wagner, T, Koch, J, Ermler, U, Shima, S.
Deposit date:2017-07-05
Release date:2017-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction.
Science, 357, 2017
5ODH
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BU of 5odh by Molmil
Heterodisulfide reductase / [NiFe]-hydrogenase complex from Methanothermococcus thermolithotrophicus soaked with heterodisulfide for 3.5 minutes
Descriptor: 1-THIOETHANESULFONIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:Wagner, T, Koch, J, Ermler, U, Shima, S.
Deposit date:2017-07-05
Release date:2017-08-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction.
Science, 357, 2017
2YRN
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BU of 2yrn by Molmil
Solution structure of the CH domain from Human Neuron navigator 2
Descriptor: Neuron navigator 2 isoform 4
Authors:Tomizawa, T, Tochio, N, Koshiba, S, Inoue, M, Nakamura, Y, Furukawa, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2008-02-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the CH domain from Human Neuron navigator 2
To be Published
2YUY
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BU of 2yuy by Molmil
Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
Descriptor: Rho GTPase activating protein 21
Authors:Niraula, T.N, Yoneyama, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
To be Published
2YS0
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BU of 2ys0 by Molmil
Solution structure of the Somatomedin B domain of human Ectonucleotide pyrophosphatase/phosphodiesterase family member
Descriptor: Ectonucleotide pyrophosphatase/phosphodiesterase family member 1
Authors:Abe, H, Sasagawa, A, Tochio, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the Somatomedin B domain of human Ectonucleotide pyrophosphatase/phosphodiesterase family member
To be Published
1UF5
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BU of 1uf5 by Molmil
Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase complexed with N-carbamyl-D-methionine
Descriptor: 1,2-ETHANEDIOL, 4-METHYLSULFANYL-2-UREIDO-BUTYRIC ACID, N-carbamyl-D-amino acid amidohydrolase
Authors:Hashimoto, H, Aoki, M, Shimizu, T, Nakai, T, Morikawa, H, Ikenaka, Y, Takahashi, S, Sato, M.
Deposit date:2003-05-23
Release date:2004-06-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of C171A/V236A mutant of N-carbamyl-D-amino acid amidohydrolase
To be published
2YRT
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BU of 2yrt by Molmil
Solution structure of the CHORD domain of human CHORD-containing protein 1
Descriptor: CHORD containing protein-1, ZINC ION
Authors:Nameki, N, Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the CHORD domain of human CHORD-containing protein 1
To be Published
2YU7
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Solution structure of the SHP-1 C-terminal SH2 domain complexed with a tyrosine-phosphorylated peptide from NKG2A
Descriptor: Tyrosine-protein phosphatase non-receptor type 6, natural killer group 2A
Authors:Kasai, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2008-04-15
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the SHP-1 C-terminal SH2 domain complexed with a tyrosine-phosphorylated peptide from NKG2A
To be Published
2YUP
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Solution structure of the second SH3 domain of human Vinexin
Descriptor: Vinexin
Authors:Abe, H, Tochio, N, Miyamoto, K, Saito, K, Sasagawa, A, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second SH3 domain of human Vinexin
To be Published

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