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PDB: 598 件
2CXC
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BU of 2cxc by Molmil
Crystal structure of archaeal transcription termination factor NusA
分子名称: NusA
著者Shibata, R, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and RNA-binding analysis of the archaeal transcription factor NusA
Biochem.Biophys.Res.Commun., 355, 2007
5ZO6
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BU of 5zo6 by Molmil
Crystal structure of C166, a backbone circularized G-CSF
分子名称: Granulocyte colony-stimulating factor
著者Shibuya, R, Miyafusa, T, Honda, S.
登録日2018-04-12
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Stabilization of backbone-circularized protein is attained by synergistic gains in enthalpy of folded structure and entropy of unfolded structure.
Febs J., 2019
2E5B
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BU of 2e5b by Molmil
Crystal structure of Human NMPRTase as free-form
分子名称: Nicotinamide phosphoribosyltransferase
著者Takahashi, R, Nakamura, S, Kobayashi, Y, Ohkubo, T.
登録日2006-12-20
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and reaction mechanism of human nicotinamide phosphoribosyltransferase
J.Biochem., 147, 2010
1XQD
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BU of 1xqd by Molmil
Crystal structure of P450NOR complexed with 3-pyridinealdehyde adenine dinucleotide
分子名称: CYTOCHROME P450 55A1, NICOTINIC ACID ADENINE DINUCLEOTIDE, PROTOPORPHYRIN IX CONTAINING FE
著者Oshima, R, Fushinobu, S, Takaya, N, Su, F, Wakagi, T, Shoun, H.
登録日2004-10-12
公開日2004-10-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural evidence for direct hydride transfer from NADH to cytochrome P450nor
J.Mol.Biol., 342, 2004
1WW1
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BU of 1ww1 by Molmil
Crystal structure of tRNase Z from Thermotoga maritima
分子名称: ZINC ION, tRNase Z
著者Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-30
公開日2005-02-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of the tRNA 3' Processing Endoribonuclease tRNase Z from Thermotoga maritima
J.Biol.Chem., 280, 2005
2YVT
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BU of 2yvt by Molmil
Crystal structure of aq_1956
分子名称: Hypothetical protein aq_1956
著者Ishii, R, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-15
公開日2007-10-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of aq_1956
To be Published
3A56
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BU of 3a56 by Molmil
Crystal structure of pro- protein-glutaminase
分子名称: CITRIC ACID, Protein-glutaminase
著者Hashizume, R, Yamaguchi, S, Mikami, B.
登録日2009-07-31
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.728 Å)
主引用文献Crystal structures of protein glutaminase and its pro forms converted into enzyme-substrate complex
J.Biol.Chem., 286, 2011
2ZK9
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BU of 2zk9 by Molmil
Crystal Structure of Protein-glutaminase
分子名称: GLYCEROL, Protein-glutaminase, SODIUM ION
著者Hashizume, R.
登録日2008-03-13
公開日2009-03-17
最終更新日2012-08-29
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal structures of protein glutaminase and its pro forms converted into enzyme-substrate complex
J.Biol.Chem., 286, 2011
2YVU
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BU of 2yvu by Molmil
Crystal structure of APE1195
分子名称: Probable adenylyl-sulfate kinase
著者Ishii, R, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-15
公開日2007-10-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of APE1195
To be published
3AOA
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BU of 3aoa by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
分子名称: Acriflavine resistance protein B
著者Nakashima, R, Sakurai, K, Yamaguchi, A.
登録日2010-09-23
公開日2011-11-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3A55
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BU of 3a55 by Molmil
Crystal structure of the A47Q2 mutant of pro- protein-glutaminase
分子名称: Protein-glutaminase
著者Hashizume, R, Yamaguchi, S, Mikami, B.
登録日2009-07-30
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structures of protein glutaminase and its pro forms converted into enzyme-substrate complex
J.Biol.Chem., 286, 2011
3A54
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BU of 3a54 by Molmil
Crystal structure of the A47Q1 mutant of pro-protein-glutaminase
分子名称: Protein-glutaminase
著者Hashizume, R, Yamaguchi, S, Mikami, B.
登録日2009-07-30
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献Crystal structures of protein glutaminase and its pro forms converted into enzyme-substrate complex
J.Biol.Chem., 286, 2011
3AOB
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BU of 3aob by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
分子名称: Acriflavine resistance protein B, RIFAMPICIN
著者Nakashima, R, Sakurai, K, Yamaguchi, A.
登録日2010-09-23
公開日2011-11-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3AOC
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BU of 3aoc by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
分子名称: Acriflavine resistance protein B, ERYTHROMYCIN A
著者Nakashima, R, Sakurai, K, Yamaguchi, A.
登録日2010-09-23
公開日2011-11-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3AOD
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BU of 3aod by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
分子名称: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, Acriflavine resistance protein B, RIFAMPICIN
著者Nakashima, R, Sakurai, K, Yamaguchi, A.
登録日2010-09-23
公開日2011-11-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3TTF
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BU of 3ttf by Molmil
Crystal structure of E. coli HypF with AMP and carbamoyl phosphate
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Transcriptional regulatory protein, ...
著者Petkun, S, Shi, R, Li, Y, Cygler, M.
登録日2011-09-14
公開日2011-12-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites.
Structure, 19, 2011
8D91
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BU of 8d91 by Molmil
Crystal structure of ChoE in complex with acetate and tetraethylammonium (TEA)
分子名称: ACETATE ION, ChoE, TETRAETHYLAMMONIUM ION
著者Pham, V.D, Shi, R.
登録日2022-06-09
公開日2023-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D8Z
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BU of 8d8z by Molmil
Crystal structure of ChoE N147A mutant in complex with thiocholine and chloride
分子名称: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, CHLORIDE ION, ChoE, ...
著者Pham, V.D, Shi, R.
登録日2022-06-09
公開日2023-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D8W
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BU of 8d8w by Molmil
Crystal structure of ChoE with Ser38 adopting alternative conformations
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ChoE, IODIDE ION
著者Pham, V.D, Shi, R.
登録日2022-06-09
公開日2023-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D8Y
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BU of 8d8y by Molmil
Crystal structure of ChoE N147A mutant in complex with acetylthiocholine
分子名称: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, ACETYLTHIOCHOLINE, CHLORIDE ION, ...
著者Pham, V.D, Shi, R.
登録日2022-06-09
公開日2023-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D90
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BU of 8d90 by Molmil
Crystal structure of ChoE N147A mutant in complex with bromide ions
分子名称: BROMIDE ION, ChoE, GLYCEROL
著者Pham, V.D, Shi, R.
登録日2022-06-09
公開日2023-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D8X
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BU of 8d8x by Molmil
Crystal structure of ChoE in complex with acetate and thiocholine (crystal form 2)
分子名称: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, ACETATE ION, CHLORIDE ION, ...
著者Pham, V.D, Shi, R.
登録日2022-06-09
公開日2023-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8TW1
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BU of 8tw1 by Molmil
Crystal structure of Lys2972, a phage endolysin targeting Streptococcus thermophilus
分子名称: Endolysin Lys2972, GLYCEROL, SODIUM ION
著者Zhu, X, Moineau, S, Shi, R.
登録日2023-08-18
公開日2024-03-27
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Fermentation Practices Select for Thermostable Endolysins in Phages.
Mol.Biol.Evol., 41, 2024
4X8Q
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BU of 4x8q by Molmil
X-ray crystal structure of AlkD2 from Streptococcus mutans
分子名称: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
著者Mullins, E.A, Shi, R, Eichman, B.F.
登録日2014-12-10
公開日2015-05-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.729 Å)
主引用文献A New Family of HEAT-Like Repeat Proteins Lacking a Critical Substrate Recognition Motif Present in Related DNA Glycosylases.
Plos One, 10, 2015
6UQX
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BU of 6uqx by Molmil
Crystal structure of ChoE in complex with propionylthiocholine
分子名称: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, ChoE, IODIDE ION, ...
著者Pham, V.D, Shi, R.
登録日2019-10-21
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural insights into the putative bacterial acetylcholinesterase ChoE and its substrate inhibition mechanism.
J.Biol.Chem., 295, 2020

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