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PDB: 598 件

3G05
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Crystal structure of N-terminal domain (2-550) of E.coli MnmG
分子名称: SULFATE ION, tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2009-01-27
公開日2009-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structure-function analysis of Escherichia coli MnmG (GidA), a highly conserved tRNA-modifying enzyme.
J.Bacteriol., 191, 2009
6U0S
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BU of 6u0s by Molmil
Crystal structure of the flavin-dependent monooxygenase PieE in complex with FAD and substrate
分子名称: 2,4-dichlorophenol 6-monooxygenase, 2-[(2E,5E,7E,9R,10R,11E)-10-hydroxy-3,7,9,11-tetramethyltrideca-2,5,7,11-tetraen-1-yl]-6-methoxy-3-methylpyridin-4-ol, CHLORIDE ION, ...
著者Shi, R, Manenda, M.
登録日2019-08-14
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structural analyses of the Group A flavin-dependent monooxygenase PieE reveal a sliding FAD cofactor conformation bridging OUT and IN conformations.
J.Biol.Chem., 295, 2020
4EEC
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BU of 4eec by Molmil
Crystal Structure of the glycopeptide antibiotic sulfotransferase StaL complexed with A3P and desulfo-A47934.
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, StaL, desulfo-A47934
著者Shi, R, Cygler, M.
登録日2012-03-28
公開日2012-07-04
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of sulfonation of the glycopeptide antibiotic scaffold by the sulfotransferase StaL
Proc.Natl.Acad.Sci.USA, 2012
3G2Q
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BU of 3g2q by Molmil
Crystal Structure of the Glycopeptide N-methyltransferase MtfA complexed with sinefungin
分子名称: PCZA361.24, SINEFUNGIN
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2009-01-31
公開日2009-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure and function of the glycopeptide N-methyltransferase MtfA, a tool for the biosynthesis of modified glycopeptide antibiotics.
Chem.Biol., 16, 2009
3G2P
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Crystal Structure of the Glycopeptide N-methyltransferase MtfA complexed with (S)-adenosyl-L-homocysteine (SAH)
分子名称: PCZA361.24, S-ADENOSYL-L-HOMOCYSTEINE
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2009-01-31
公開日2009-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structure and function of the glycopeptide N-methyltransferase MtfA, a tool for the biosynthesis of modified glycopeptide antibiotics.
Chem.Biol., 16, 2009
7C01
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BU of 7c01 by Molmil
Molecular basis for a potent human neutralizing antibody targeting SARS-CoV-2 RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CB6 heavy chain, CB6 light chain, ...
著者Shi, R, Qi, J, Wang, Q, Gao, F.G, Yan, J.
登録日2020-04-29
公開日2020-05-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献A human neutralizing antibody targets the receptor-binding site of SARS-CoV-2.
Nature, 584, 2020
6U0P
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BU of 6u0p by Molmil
Crystal structure of PieE, the flavin-dependent monooxygenase involved in the biosynthesis of piericidin A1
分子名称: 2,4-dichlorophenol 6-monooxygenase, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Shi, R, Manenda, M, Picard, M.-E.
登録日2019-08-14
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structural analyses of the Group A flavin-dependent monooxygenase PieE reveal a sliding FAD cofactor conformation bridging OUT and IN conformations.
J.Biol.Chem., 295, 2020
6UQV
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Crystal structure of ChoE, a bacterial acetylcholinesterase from Pseudomonas aeruginosa
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BUTANOIC ACID, CHLORIDE ION, ...
著者Shi, R, Pham, V.D, To, T.A.
登録日2019-10-21
公開日2020-05-13
最終更新日2020-07-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural insights into the putative bacterial acetylcholinesterase ChoE and its substrate inhibition mechanism.
J.Biol.Chem., 295, 2020
6MXR
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BU of 6mxr by Molmil
Crystal structure of the dimeric bH1-Fab variant [HC-Y33W,HC-D98M,HC-G99M]
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
著者Shi, R.
登録日2018-10-31
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Binding symmetry and surface flexibility mediate antibody self-association.
Mabs, 11, 2019
6MY4
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BU of 6my4 by Molmil
Crystal structure of the dimeric bH1-Fab variant [HC-Y33W,HC-D98M,HC-G99M,LC-S30bR]
分子名称: 1,2-ETHANEDIOL, anti-VEGF-A Fab fragment bH1 heavy chain, anti-VEGF-A Fab fragment bH1 light chain
著者Shi, R, Picard, M.-E, Manenda, M.
登録日2018-11-01
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Binding symmetry and surface flexibility mediate antibody self-association.
Mabs, 11, 2019
6MY5
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BU of 6my5 by Molmil
Crystal structure of the dimeric bH1-Fab variant [HC-Y33W,HC-D98F,HC-G99M,LC-S30bR]
分子名称: 1,2-ETHANEDIOL, anti-VEGF-A Fab fragment bH1 heavy chain, anti-VEGF-A Fab fragment bH1 light chain
著者Shi, R.
登録日2018-11-01
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Binding symmetry and surface flexibility mediate antibody self-association.
Mabs, 11, 2019
6MXS
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BU of 6mxs by Molmil
Crystal structure of the dimeric bH1-Fab variant [HC-Y33W,HC-D98F,HC-G99M]
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
著者Shi, R, Picard, M.-E, Manenda, M.S.
登録日2018-10-31
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Binding symmetry and surface flexibility mediate antibody self-association.
Mabs, 11, 2019
3CES
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BU of 3ces by Molmil
Crystal Structure of E.coli MnmG (GidA), a Highly-Conserved tRNA Modifying Enzyme
分子名称: tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-02-29
公開日2009-03-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.412 Å)
主引用文献Structure-function analysis of Escherichia coli MnmG (GidA), a highly conserved tRNA-modifying enzyme.
J.Bacteriol., 191, 2009
5CPC
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BU of 5cpc by Molmil
Crystal structure of SopD, a type III secreted virulence effector from Salmonella enterica
分子名称: Secreted effector protein SopD
著者Shi, R, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2015-07-21
公開日2015-09-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Salmonella Disrupts Host Endocytic Trafficking by SopD2-Mediated Inhibition of Rab7.
Cell Rep, 12, 2015
5CQ9
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BU of 5cq9 by Molmil
Crystal structure of SopD2, a type III secreted virulence effector from Salmonella enterica
分子名称: 11-mer peptide, Secreted effector protein sopD2
著者Shi, R, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2015-07-21
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Salmonella Disrupts Host Endocytic Trafficking by SopD2-Mediated Inhibition of Rab7.
Cell Rep, 12, 2015
1JTV
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BU of 1jtv by Molmil
Crystal structure of 17beta-Hydroxysteroid Dehydrogenase Type 1 complexed with Testosterone
分子名称: 17 beta-hydroxysteroid dehydrogenase type 1, GLYCEROL, TESTOSTERONE
著者Shi, R, Nahoum, V, Lin, S.X.
登録日2001-08-22
公開日2003-06-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Pseudo-symmetry of C19 steroids, alternative binding orientations, and multispecificity in human estrogenic 17beta-hydroxysteroid dehydrogenase.
FASEB J., 17, 2003
5VI0
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BU of 5vi0 by Molmil
Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an abasic site analog
分子名称: DNA (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*T)-3'), SODIUM ION, ...
著者Shi, R, Eichman, B.F.
登録日2017-04-13
公開日2017-10-25
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献Selective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC.
EMBO J., 37, 2018
5VHV
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BU of 5vhv by Molmil
Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an oxocarbenium-intermediate analog
分子名称: (2R,5R,13R,16R)-9-(hydroxymethyl)-9-{[(2R)-2-hydroxypropoxy]methyl}-5,13-dimethyl-4,7,11,14-tetraoxaheptadecane-2,16-diol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3'), ...
著者Shi, R, Eichman, B.F.
登録日2017-04-13
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Selective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC.
EMBO J., 37, 2018
3CQH
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BU of 3cqh by Molmil
Crystal Structure of L-xylulose-5-phosphate 3-epimerase UlaE from the Anaerobic L-ascorbate Utilization Pathway of Escherichia coli
分子名称: L-ribulose-5-phosphate 3-epimerase ulaE, SULFATE ION
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-04-03
公開日2008-11-25
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structure of L-xylulose-5-Phosphate 3-epimerase (UlaE) from the anaerobic L-ascorbate utilization pathway of Escherichia coli: identification of a novel phosphate binding motif within a TIM barrel fold.
J.Bacteriol., 190, 2008
3BE5
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Crystal structure of FitE (crystal form 1), a group III periplasmic siderophore binding protein
分子名称: CHLORIDE ION, Putative iron compound-binding protein of ABC transporter family
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2007-11-16
公開日2008-10-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Trapping open and closed forms of FitE-A group III periplasmic binding protein.
Proteins, 75, 2008
3BE6
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Crystal structure of FitE (crystal form 2), a group III periplasmic siderophore binding protein
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2007-11-16
公開日2008-10-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Trapping open and closed forms of FitE-A group III periplasmic binding protein.
Proteins, 75, 2008
3CQK
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BU of 3cqk by Molmil
Crystal Structure of L-xylulose-5-phosphate 3-epimerase UlaE (form B) complex with Zn2+ and sulfate
分子名称: L-ribulose-5-phosphate 3-epimerase ulaE, SULFATE ION, ZINC ION
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-04-03
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Structure of L-xylulose-5-Phosphate 3-epimerase (UlaE) from the anaerobic L-ascorbate utilization pathway of Escherichia coli: identification of a novel phosphate binding motif within a TIM barrel fold.
J.Bacteriol., 190, 2008
3CQJ
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Crystal Structure of L-xylulose-5-phosphate 3-epimerase UlaE (form B) complex with Zn2+
分子名称: L-ribulose-5-phosphate 3-epimerase ulaE, ZINC ION
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-04-03
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure of L-xylulose-5-Phosphate 3-epimerase (UlaE) from the anaerobic L-ascorbate utilization pathway of Escherichia coli: identification of a novel phosphate binding motif within a TIM barrel fold.
J.Bacteriol., 190, 2008
3CQI
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BU of 3cqi by Molmil
Crystal Structure of L-xylulose-5-phosphate 3-epimerase UlaE (form B) complex with sulfate
分子名称: L-ribulose-5-phosphate 3-epimerase ulaE, SULFATE ION
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-04-03
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of L-xylulose-5-Phosphate 3-epimerase (UlaE) from the anaerobic L-ascorbate utilization pathway of Escherichia coli: identification of a novel phosphate binding motif within a TIM barrel fold.
J.Bacteriol., 190, 2008
3G2O
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Crystal Structure of the Glycopeptide N-methyltransferase MtfA complexed with (S)-adenosyl-L-methionine (SAM)
分子名称: PCZA361.24, S-ADENOSYLMETHIONINE
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2009-01-31
公開日2009-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and function of the glycopeptide N-methyltransferase MtfA, a tool for the biosynthesis of modified glycopeptide antibiotics.
Chem.Biol., 16, 2009

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