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PDB: 2565 results

6HUF
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BU of 6huf by Molmil
Coping with strong translational non-crystallographic symmetry and extreme anisotropy in molecular replacement with Phaser: human Rab27a
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Rab-27A
Authors:Jamshidiha, M, Perez-Dorado, I, Murray, J.W, Tate, E.W, Cota, E, Read, R.J.
Deposit date:2018-10-08
Release date:2019-03-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Coping with strong translational noncrystallographic symmetry and extreme anisotropy in molecular replacement with Phaser: human Rab27a.
Acta Crystallogr D Struct Biol, 75, 2019
6L4C
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BU of 6l4c by Molmil
Crystal structure of vicilin from Corylus avellana (Hazelnut)
Descriptor: 48-kDa glycoprotein, COPPER (II) ION
Authors:Shikhi, M, Salunke, D.M.
Deposit date:2019-10-16
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.191 Å)
Cite:Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function.
Biochem.Biophys.Res.Commun., 522, 2020
1DVE
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BU of 1dve by Molmil
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH HEME
Descriptor: HEME OXYGENASE-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M, Omata, Y, Kakuta, Y, Sakamoto, H, Noguchi, M, Fukuyama, K.
Deposit date:2000-01-20
Release date:2000-04-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of rat heme oxygenase-1 in complex with heme.
FEBS Lett., 471, 2000
3WTW
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BU of 3wtw by Molmil
Crystal structure of the complex comprised of ETS1(K167A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
Descriptor: Core-binding factor subunit beta, DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3'), ...
Authors:Shiina, M, Hamada, K, Ogata, K.
Deposit date:2014-04-21
Release date:2014-08-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTX
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BU of 3wtx by Molmil
Crystal structure of the complex comprised of ETS1(Y329A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
Descriptor: Core-binding factor subunit beta, DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3'), ...
Authors:Shiina, M, Hamada, K, Ogata, K.
Deposit date:2014-04-21
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTY
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BU of 3wty by Molmil
Crystal structure of the complex comprised of ETS1(G333P), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
Descriptor: Core-binding factor subunit beta, DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3'), ...
Authors:Shiina, M, Hamada, K, Ogata, K.
Deposit date:2014-04-21
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
7KSL
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BU of 7ksl by Molmil
Substrate-free human mitochondrial LONP1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
Authors:Shin, M, Watson, E.R, Song, A.S, Mindrebo, J.T, Novick, S.R, Griffin, P, Wiseman, R.L, Lander, G.C.
Deposit date:2020-11-23
Release date:2020-12-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the human LONP1 protease reveal regulatory steps involved in protease activation.
Nat Commun, 12, 2021
3WTV
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BU of 3wtv by Molmil
Crystal structure of the complex comprised of ETS1(V170G), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
Descriptor: Core-binding factor subunit beta, DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3'), ...
Authors:Shiina, M, Hamada, K, Ogata, K.
Deposit date:2014-04-21
Release date:2014-08-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTT
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BU of 3wtt by Molmil
Crystal structure of the complex comprised of phosphorylated ETS1, RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
Descriptor: 5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', Core-binding factor subunit beta, ...
Authors:Shiina, M, Hamada, K, Ogata, K.
Deposit date:2014-04-21
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTS
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BU of 3wts by Molmil
Crystal structure of the complex comprised of ETS1, RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
Descriptor: 5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', Core-binding factor subunit beta, ...
Authors:Shiina, M, Hamada, K, Ogata, K.
Deposit date:2014-04-21
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTU
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BU of 3wtu by Molmil
Crystal structure of the complex comprised of ETS1 (V170A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
Descriptor: Core-binding factor subunit beta, DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3'), ...
Authors:Shiina, M, Hamada, K, Ogata, K.
Deposit date:2014-04-21
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
2K7F
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BU of 2k7f by Molmil
HADDOCK calculated model of the complex between the BRCT region of RFC p140 and dsDNA
Descriptor: 5'-D(P*DCP*DGP*DAP*DCP*DCP*DTP*DCP*DGP*DAP*DGP*DAP*DTP*DCP*DA)-3', 5'-D(P*DCP*DTP*DCP*DGP*DAP*DGP*DGP*DTP*DCP*DG)-3', Replication factor C subunit 1
Authors:Kobayashi, M, Ab, E, Bonvin, A, Siegal, G.
Deposit date:2008-08-10
Release date:2009-09-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the DNA-bound BRCA1 C-terminal region from human replication factor C p140 and model of the protein-DNA complex.
J.Biol.Chem., 285, 2010
2K6G
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BU of 2k6g by Molmil
Solution structure of the DNA binding BRCT domain from the large subunit of human Replication Factor C
Descriptor: Replication factor C subunit 1
Authors:Kobayashi, M, Siegal, G, Ab, E, Bonvin, A.M.J.J.
Deposit date:2008-07-09
Release date:2009-09-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the DNA bound BRCT domain from human Replication Factor C p140
To be Published
4K2O
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BU of 4k2o by Molmil
The Structure of a Triple Mutant of the Tiam1 PH-CC-Ex Domain
Descriptor: T-lymphoma invasion and metastasis-inducing protein 1
Authors:Joshi, M, Gakhar, L, Fuentes, E.J.
Deposit date:2013-04-09
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:High-resolution structure of the Tiam1 PHn-CC-Ex domain.
Acta Crystallogr.,Sect.F, 69, 2013
2LMU
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BU of 2lmu by Molmil
Androcam at high calcium
Descriptor: CALCIUM ION, Calmodulin-related protein 97A
Authors:Joshi, M.K, Moran, S.T, Beckingham, K.M, Mackenzie, K.R.
Deposit date:2011-12-12
Release date:2012-08-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of androcam supports specialized interactions with myosin VI.
Proc.Natl.Acad.Sci.USA, 109, 2012
2LMV
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BU of 2lmv by Molmil
Androcam at high calcium with three explicit Ca2+
Descriptor: CALCIUM ION, Calmodulin-related protein 97A
Authors:Joshi, M.K, Moran, S.T, Beckingham, K.M, Mackenzie, K.R.
Deposit date:2011-12-12
Release date:2012-08-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of androcam supports specialized interactions with myosin VI.
Proc.Natl.Acad.Sci.USA, 109, 2012
1DVG
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BU of 1dvg by Molmil
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH HEME; SELELENO-METHIONINE DERIVATIVE, MUTATED AT M51T,M93L,M155L,M191L.
Descriptor: HEME OXYGENASE-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M, Omata, Y, Kakuta, Y, Sakamoto, H, Noguchi, M, Fukuyama, K.
Deposit date:2000-01-20
Release date:2000-04-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of rat heme oxygenase-1 in complex with heme.
FEBS Lett., 471, 2000
2LMT
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BU of 2lmt by Molmil
NMR structure of Androcam
Descriptor: CALCIUM ION, Calmodulin-related protein 97A
Authors:Joshi, M.K, Moran, S.T, Beckingham, K.M, Mackenzie, K.R.
Deposit date:2011-12-12
Release date:2012-08-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of androcam supports specialized interactions with myosin VI.
Proc.Natl.Acad.Sci.USA, 109, 2012
4MEC
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BU of 4mec by Molmil
Crystal structure of RAT Heme oxygenase-1 in complex with ZN(II)-Protoporphyrin IX
Descriptor: Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING ZN
Authors:Sugishima, M.
Deposit date:2013-08-26
Release date:2014-08-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Distal regulation of heme binding of heme oxygenase-1 mediated by conformational fluctuations
Biochemistry, 54, 2015
3VSW
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BU of 3vsw by Molmil
Human renin in complex with compound 8
Descriptor: (2S,4S,5S)-5-amino-N-(3-amino-2,2-dimethyl-3-oxopropyl)-4-hydroxy-6-{4-[2-(3-methoxypropoxy)phenyl]-3-oxopiperazin-1-yl}-2-(propan-2-yl)hexanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Renin
Authors:Takahashi, M, Hanzawa, H.
Deposit date:2012-05-11
Release date:2012-07-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Design and optimization of novel (2S,4S,5S)-5-amino-6-(2,2-dimethyl-5-oxo-4-phenylpiperazin-1-yl)-4-hydroxy-2-isopropylhexanamides as renin inhibitors
Bioorg.Med.Chem.Lett., 22, 2012
3WTZ
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BU of 3wtz by Molmil
Crystal structure of ETS-1 DNA binding and autoinhibitory domains (276-441)
Descriptor: Protein C-ets-1
Authors:Shiina, M, Hamada, K, Ogata, K.
Deposit date:2014-04-21
Release date:2014-08-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WU0
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BU of 3wu0 by Molmil
Crystal structure of phosphorylated ETS-1 DNA binding and autoinhibitory domains (276-441)
Descriptor: Protein C-ets-1
Authors:Shiina, M, Hamada, K, Ogata, K.
Deposit date:2014-04-21
Release date:2014-08-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
1LMT
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BU of 1lmt by Molmil
STRUCTURE OF A CONFORMATIONALLY CONSTRAINED ARG-GLY-ASP SEQUENCE INSERTED INTO HUMAN LYSOZYME
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, HUMAN LYSOZYME
Authors:Matsushima, M, Song, H.
Deposit date:1995-01-13
Release date:1995-03-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of a conformationally constrained Arg-Gly-Asp sequence inserted into human lysozyme.
J.Biol.Chem., 270, 1995
1LZ5
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BU of 1lz5 by Molmil
STRUCTURAL AND FUNCTIONAL ANALYSES OF THE ARG-GLY-ASP SEQUENCE INTRODUCED INTO HUMAN LYSOZYME
Descriptor: CHLORIDE ION, HUMAN LYSOZYME
Authors:Matsushima, M, Inaka, K, Yamada, T, Sekiguchi, K, Kikuchi, M.
Deposit date:1993-02-03
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional analyses of the Arg-Gly-Asp sequence introduced into human lysozyme.
J.Biol.Chem., 268, 1993
1IWP
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BU of 1iwp by Molmil
Glycerol Dehydratase-cyanocobalamin Complex of Klebsiella pneumoniae
Descriptor: COBALAMIN, Glycerol Dehydratase Alpha subunit, Glycerol Dehydratase Beta subunit, ...
Authors:Yamanishi, M, Yunoki, M, Tobimatsu, T, Toraya, T.
Deposit date:2002-05-28
Release date:2002-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of coenzyme B12-dependent glycerol dehydratase in complex with cobalamin and propane-1,2-diol.
Eur.J.Biochem., 269, 2002

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