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PDB: 264 件

3L02
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Crystal structure of N-acetyl-L-ornithine transcarbamylase E92A mutant complexed with carbamyl phosphate and N-succinyl-L-norvaline
分子名称: N-(3-CARBOXYPROPANOYL)-L-NORVALINE, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
著者Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
登録日2009-12-09
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3L04
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Crystal structure of N-acetyl-L-ornithine transcarbamylase E92P mutant complexed with carbamyl phosphate and N-succinyl-L-norvaline
分子名称: N-(3-CARBOXYPROPANOYL)-L-NORVALINE, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
著者Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
登録日2009-12-09
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3KZC
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Crystal structure of N-acetyl-L-ornithine transcarbamylase
分子名称: N-acetylornithine carbamoyltransferase, SULFATE ION
著者Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
登録日2009-12-08
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of N-acetylornithine transcarbamylase from Xanthomonas campestris: a novel enzyme in a new arginine biosynthetic pathway found in several eubacteria.
J.Biol.Chem., 280, 2005
3KZK
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Crystal structure of acetylornithine transcarbamylase complexed with acetylcitrulline
分子名称: (S)-2-ACETAMIDO-5-UREIDOPENTANOIC ACID, N-acetylornithine carbamoyltransferase, SULFATE ION
著者Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
登録日2009-12-08
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of N-acetylornithine transcarbamylase from Xanthomonas campestris: a novel enzyme in a new arginine biosynthetic pathway found in several eubacteria.
J.Biol.Chem., 280, 2005
3L06
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Crystal structure of N-acetyl-L-ornithine transcarbamylase E92V mutant complexed with carbamyl phosphate and N-succinyl-L-norvaline
分子名称: N-(3-CARBOXYPROPANOYL)-L-NORVALINE, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
著者Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
登録日2009-12-09
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3KZN
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Crystal structure of N-acetyl-L-ornithine transcarbamylase complexed with N-acetyl-L-ornirthine
分子名称: GLYCEROL, N-acetylornithine carbamoyltransferase, N~2~-ACETYL-L-ORNITHINE, ...
著者Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
登録日2009-12-08
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of N-acetylornithine transcarbamoylase from Xanthomonas campestris complexed with substrates and substrate analogs imply mechanisms for substrate binding and catalysis.
Proteins, 64, 2006
3L05
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Crystal structure of N-acetyl-L-ornithine transcarbamylase E92S mutant complexed with carbamyl phosphate and N-succinyl-L-norvaline
分子名称: N-(3-CARBOXYPROPANOYL)-L-NORVALINE, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
著者Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
登録日2009-12-09
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3KZM
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Crystal structure of N-acetyl-L-ornithine transcarbamylase complexed with carbamyl phosphate
分子名称: GLYCEROL, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
著者Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
登録日2009-12-08
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structures of N-acetylornithine transcarbamoylase from Xanthomonas campestris complexed with substrates and substrate analogs imply mechanisms for substrate binding and catalysis.
Proteins, 64, 2006
3KZO
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Crystal structure of N-acetyl-L-ornithine transcarbamylase complexed with carbamyl phosphate and N-acetyl-L-norvaline
分子名称: GLYCEROL, N-ACETYL-L-NORVALINE, N-acetylornithine carbamoyltransferase, ...
著者Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
登録日2009-12-08
公開日2010-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of N-acetylornithine transcarbamoylase from Xanthomonas campestris complexed with substrates and substrate analogs imply mechanisms for substrate binding and catalysis.
Proteins, 64, 2006
3D2M
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Crystal structure of N-acetylglutamate synthase from Neisseria gonorrhoeae complexed with coenzyme A and L-glutamate
分子名称: COENZYME A, GLUTAMIC ACID, Putative acetylglutamate synthase
著者Shi, D, Min, L, Jin, Z, Allewell, N.M, Tuchman, M.
登録日2008-05-08
公開日2008-12-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Mechanism of Allosteric Inhibition of N-Acetyl-L-glutamate Synthase by L-Arginine.
J.Biol.Chem., 284, 2009
3D2P
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Crystal structure of N-acetylglutamate synthase from Neisseria gonorrhoeae complexed with coenzyme A and L-arginine
分子名称: ARGININE, COENZYME A, Putative acetylglutamate synthase
著者Shi, D, Min, L, Jin, Z, Allewell, N.M, Tuchman, M.
登録日2008-05-08
公開日2008-12-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Mechanism of Allosteric Inhibition of N-Acetyl-L-glutamate Synthase by L-Arginine.
J.Biol.Chem., 284, 2009
3J4G
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Structure of lysozyme solved by MicroED to 2.9 A
分子名称: Lysozyme C
著者Shi, D, Nannenga, B.L, Iadanza, M.G, Gonen, T.
登録日2013-08-12
公開日2013-11-13
最終更新日2015-04-15
実験手法ELECTRON CRYSTALLOGRAPHY (2.901 Å)
主引用文献Three-dimensional electron crystallography of protein microcrystals.
Elife, 2, 2013
3S6K
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Crystal structure of xcNAGS
分子名称: Acetylglutamate kinase
著者Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
登録日2011-05-25
公開日2012-04-18
実験手法X-RAY DIFFRACTION (2.8018 Å)
主引用文献A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3S6G
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Crystal structures of Seleno-substituted mutant mmNAGS in space group P212121
分子名称: 1,2-ETHANEDIOL, COENZYME A, MALONATE ION, ...
著者Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
登録日2011-05-25
公開日2012-04-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6681 Å)
主引用文献A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3S6H
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Crystal structure of native mmNAGS/k
分子名称: COENZYME A, GLUTAMIC ACID, N-acetylglutamate kinase / N-acetylglutamate synthase
著者Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
登録日2011-05-25
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3S7Y
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Crystal structure of mmNAGS in Space Group P3121 at 4.3 A resolution
分子名称: N-acetylglutamate kinase / N-acetylglutamate synthase
著者Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
登録日2011-05-27
公開日2012-04-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (4.3077 Å)
主引用文献A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
4I49
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Structure of ngNAGS bound with bisubstrate analog CoA-NAG
分子名称: (2S)-2-({(3S,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14,20-trioxo-2,4,6-trioxa-18-thia-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaicosan-20-yl}amino)pentanedioic acid (non-preferred name), Amino-acid acetyltransferase, SULFATE ION
著者Shi, D, Zhao, G, Allewell, N.M, Tuchman, M.
登録日2012-11-27
公開日2013-01-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure of the complex of Neisseria gonorrhoeae N-acetyl-l-glutamate synthase with a bound bisubstrate analog.
Biochem.Biophys.Res.Commun., 430, 2013
4IWY
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SeMet-substituted RimK structure
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLUTAMIC ACID, Ribosomal protein S6 modification protein, ...
著者Shi, D, Zhao, G, Jin, Z, Allewell, N.M, Tuchman, M.
登録日2013-01-24
公開日2013-05-08
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure and function of Escherichia coli RimK, an ATP-grasp fold, l-glutamyl ligase enzyme.
Proteins, 81, 2013
4IWX
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Rimk structure at 2.85A
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLUTAMIC ACID, Ribosomal protein S6 modification protein, ...
著者Shi, D, Zhao, G, Jin, Z, Allewell, N.M, Tuchman, M.
登録日2013-01-24
公開日2013-05-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.854 Å)
主引用文献Structure and function of Escherichia coli RimK, an ATP-grasp fold, l-glutamyl ligase enzyme.
Proteins, 81, 2013
4K30
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Structure of the N-acetyltransferase domain of human N-acetylglutamate synthase
分子名称: N-ACETYL-L-GLUTAMATE, N-acetylglutamate synthase, mitochondrial
著者Shi, D, Zhao, G, Jin, Z, Allewell, N.M, Tuchman, M.
登録日2013-04-10
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.103 Å)
主引用文献Crystal structure of the N-acetyltransferase domain of human N-acetyl-L-glutamate synthase in complex with N-acetyl-L-glutamate provides insights into its catalytic and regulatory mechanisms.
Plos One, 8, 2013
5KKY
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Structure of Streptococcus pneumonia NanA bound with inhibitor 9N3Neu5Ac2en
分子名称: 5-acetamido-2,6-anhydro-3,5,9-trideoxy-9-triazan-1-yl-D-glycero-D-galacto-non-2-enonic acid, CHLORIDE ION, Sialidase A
著者Shi, D, Zhao, G.
登録日2016-06-23
公開日2017-06-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.393 Å)
主引用文献Synthesis of selective inhibitors against S. pneumoniae and V. cholerae sialidases
To Be Published
1C9Y
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HUMAN ORNITHINE TRANSCARBAMYLASE: CRYSTALLOGRAPHIC INSIGHTS INTO SUBSTRATE RECOGNITION AND CATALYTIC MECHANISM
分子名称: NORVALINE, ORNITHINE CARBAMOYLTRANSFERASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
著者Shi, D, Yu, X, Morizono, H, Tuchman, M, Allewell, N.M.
登録日1999-08-03
公開日2000-06-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human ornithine transcarbamylase complexed with carbamoyl phosphate and L-norvaline at 1.9 A resolution.
Proteins, 39, 2000
1EP9
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HUMAN ORNITHINE TRANSCARBAMYLASE: CRYSTALLOGRAPHIC INSIGHTS INTO SUBSTRATE RECOGNITION AND CONFORMATIONAL CHANGE
分子名称: ORNITHINE TRANSCARBAMYLASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
著者Shi, D, Morizono, H, Yu, X, Allewell, N.M, Tuchman, M.
登録日2000-03-28
公開日2001-04-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.
Biochem.J., 354, 2001
1FVO
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CRYSTAL STRUCTURE OF HUMAN ORNITHINE TRANSCARBAMYLASE COMPLEXED WITH CARBAMOYL PHOSPHATE
分子名称: ORNITHINE TRANSCARBAMYLASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
著者Shi, D, Morizono, H, Yu, X, Allewell, N.M, Tuchman, M.
登録日2000-09-20
公開日2001-04-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.
Biochem.J., 354, 2001
2R8V
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Native structure of N-acetylglutamate synthase from Neisseria gonorrhoeae
分子名称: ACETYL COENZYME *A, Putative acetylglutamate synthase
著者Shi, D, Sagar, V, Jin, Z, Yu, X, Caldovic, L, Morizono, H, Allewell, N.M, Tuchman, M.
登録日2007-09-11
公開日2008-01-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008

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