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PDB: 424 results

3L02
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Crystal structure of N-acetyl-L-ornithine transcarbamylase E92A mutant complexed with carbamyl phosphate and N-succinyl-L-norvaline
Descriptor: N-(3-CARBOXYPROPANOYL)-L-NORVALINE, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2009-12-09
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
4N5Q
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Crystal structure of the N-terminal ankyrin repeat domain of TRPV3
Descriptor: Transient receptor potential cation channel subfamily V member 3
Authors:Shi, D.J, Ye, S, Cao, X, Wang, K.W, Zhang, R.
Deposit date:2013-10-10
Release date:2014-01-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.946 Å)
Cite:Crystal structure of the N-terminal ankyrin repeat domain of TRPV3 reveals unique conformation of finger 3 loop critical for channel function
Protein Cell, 4, 2013
3J4G
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BU of 3j4g by Molmil
Structure of lysozyme solved by MicroED to 2.9 A
Descriptor: Lysozyme C
Authors:Shi, D, Nannenga, B.L, Iadanza, M.G, Gonen, T.
Deposit date:2013-08-12
Release date:2013-11-13
Last modified:2015-04-15
Method:ELECTRON CRYSTALLOGRAPHY (2.901 Å)
Cite:Three-dimensional electron crystallography of protein microcrystals.
Elife, 2, 2013
3S6K
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Crystal structure of xcNAGS
Descriptor: Acetylglutamate kinase
Authors:Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2011-05-25
Release date:2012-04-18
Method:X-RAY DIFFRACTION (2.8018 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3S7Y
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BU of 3s7y by Molmil
Crystal structure of mmNAGS in Space Group P3121 at 4.3 A resolution
Descriptor: N-acetylglutamate kinase / N-acetylglutamate synthase
Authors:Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2011-05-27
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.3077 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3S6H
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Crystal structure of native mmNAGS/k
Descriptor: COENZYME A, GLUTAMIC ACID, N-acetylglutamate kinase / N-acetylglutamate synthase
Authors:Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2011-05-25
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
4IWY
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BU of 4iwy by Molmil
SeMet-substituted RimK structure
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLUTAMIC ACID, Ribosomal protein S6 modification protein, ...
Authors:Shi, D, Zhao, G, Jin, Z, Allewell, N.M, Tuchman, M.
Deposit date:2013-01-24
Release date:2013-05-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and function of Escherichia coli RimK, an ATP-grasp fold, l-glutamyl ligase enzyme.
Proteins, 81, 2013
4IWX
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Rimk structure at 2.85A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLUTAMIC ACID, Ribosomal protein S6 modification protein, ...
Authors:Shi, D, Zhao, G, Jin, Z, Allewell, N.M, Tuchman, M.
Deposit date:2013-01-24
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.854 Å)
Cite:Structure and function of Escherichia coli RimK, an ATP-grasp fold, l-glutamyl ligase enzyme.
Proteins, 81, 2013
4K30
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Structure of the N-acetyltransferase domain of human N-acetylglutamate synthase
Descriptor: N-ACETYL-L-GLUTAMATE, N-acetylglutamate synthase, mitochondrial
Authors:Shi, D, Zhao, G, Jin, Z, Allewell, N.M, Tuchman, M.
Deposit date:2013-04-10
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Crystal structure of the N-acetyltransferase domain of human N-acetyl-L-glutamate synthase in complex with N-acetyl-L-glutamate provides insights into its catalytic and regulatory mechanisms.
Plos One, 8, 2013
3S6G
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Crystal structures of Seleno-substituted mutant mmNAGS in space group P212121
Descriptor: 1,2-ETHANEDIOL, COENZYME A, MALONATE ION, ...
Authors:Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2011-05-25
Release date:2012-04-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6681 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
4I49
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Structure of ngNAGS bound with bisubstrate analog CoA-NAG
Descriptor: (2S)-2-({(3S,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14,20-trioxo-2,4,6-trioxa-18-thia-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaicosan-20-yl}amino)pentanedioic acid (non-preferred name), Amino-acid acetyltransferase, SULFATE ION
Authors:Shi, D, Zhao, G, Allewell, N.M, Tuchman, M.
Deposit date:2012-11-27
Release date:2013-01-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of the complex of Neisseria gonorrhoeae N-acetyl-l-glutamate synthase with a bound bisubstrate analog.
Biochem.Biophys.Res.Commun., 430, 2013
3L04
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Crystal structure of N-acetyl-L-ornithine transcarbamylase E92P mutant complexed with carbamyl phosphate and N-succinyl-L-norvaline
Descriptor: N-(3-CARBOXYPROPANOYL)-L-NORVALINE, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2009-12-09
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3KZC
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BU of 3kzc by Molmil
Crystal structure of N-acetyl-L-ornithine transcarbamylase
Descriptor: N-acetylornithine carbamoyltransferase, SULFATE ION
Authors:Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of N-acetylornithine transcarbamylase from Xanthomonas campestris: a novel enzyme in a new arginine biosynthetic pathway found in several eubacteria.
J.Biol.Chem., 280, 2005
3L06
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Crystal structure of N-acetyl-L-ornithine transcarbamylase E92V mutant complexed with carbamyl phosphate and N-succinyl-L-norvaline
Descriptor: N-(3-CARBOXYPROPANOYL)-L-NORVALINE, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2009-12-09
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3KZN
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BU of 3kzn by Molmil
Crystal structure of N-acetyl-L-ornithine transcarbamylase complexed with N-acetyl-L-ornirthine
Descriptor: GLYCEROL, N-acetylornithine carbamoyltransferase, N~2~-ACETYL-L-ORNITHINE, ...
Authors:Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of N-acetylornithine transcarbamoylase from Xanthomonas campestris complexed with substrates and substrate analogs imply mechanisms for substrate binding and catalysis.
Proteins, 64, 2006
3L05
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BU of 3l05 by Molmil
Crystal structure of N-acetyl-L-ornithine transcarbamylase E92S mutant complexed with carbamyl phosphate and N-succinyl-L-norvaline
Descriptor: N-(3-CARBOXYPROPANOYL)-L-NORVALINE, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2009-12-09
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3KZM
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BU of 3kzm by Molmil
Crystal structure of N-acetyl-L-ornithine transcarbamylase complexed with carbamyl phosphate
Descriptor: GLYCEROL, N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of N-acetylornithine transcarbamoylase from Xanthomonas campestris complexed with substrates and substrate analogs imply mechanisms for substrate binding and catalysis.
Proteins, 64, 2006
3KZO
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BU of 3kzo by Molmil
Crystal structure of N-acetyl-L-ornithine transcarbamylase complexed with carbamyl phosphate and N-acetyl-L-norvaline
Descriptor: GLYCEROL, N-ACETYL-L-NORVALINE, N-acetylornithine carbamoyltransferase, ...
Authors:Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of N-acetylornithine transcarbamoylase from Xanthomonas campestris complexed with substrates and substrate analogs imply mechanisms for substrate binding and catalysis.
Proteins, 64, 2006
3D2M
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BU of 3d2m by Molmil
Crystal structure of N-acetylglutamate synthase from Neisseria gonorrhoeae complexed with coenzyme A and L-glutamate
Descriptor: COENZYME A, GLUTAMIC ACID, Putative acetylglutamate synthase
Authors:Shi, D, Min, L, Jin, Z, Allewell, N.M, Tuchman, M.
Deposit date:2008-05-08
Release date:2008-12-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Mechanism of Allosteric Inhibition of N-Acetyl-L-glutamate Synthase by L-Arginine.
J.Biol.Chem., 284, 2009
3D2P
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BU of 3d2p by Molmil
Crystal structure of N-acetylglutamate synthase from Neisseria gonorrhoeae complexed with coenzyme A and L-arginine
Descriptor: ARGININE, COENZYME A, Putative acetylglutamate synthase
Authors:Shi, D, Min, L, Jin, Z, Allewell, N.M, Tuchman, M.
Deposit date:2008-05-08
Release date:2008-12-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Mechanism of Allosteric Inhibition of N-Acetyl-L-glutamate Synthase by L-Arginine.
J.Biol.Chem., 284, 2009
3KZK
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BU of 3kzk by Molmil
Crystal structure of acetylornithine transcarbamylase complexed with acetylcitrulline
Descriptor: (S)-2-ACETAMIDO-5-UREIDOPENTANOIC ACID, N-acetylornithine carbamoyltransferase, SULFATE ION
Authors:Shi, D, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of N-acetylornithine transcarbamylase from Xanthomonas campestris: a novel enzyme in a new arginine biosynthetic pathway found in several eubacteria.
J.Biol.Chem., 280, 2005
1EP9
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BU of 1ep9 by Molmil
HUMAN ORNITHINE TRANSCARBAMYLASE: CRYSTALLOGRAPHIC INSIGHTS INTO SUBSTRATE RECOGNITION AND CONFORMATIONAL CHANGE
Descriptor: ORNITHINE TRANSCARBAMYLASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
Authors:Shi, D, Morizono, H, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2000-03-28
Release date:2001-04-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.
Biochem.J., 354, 2001
2R8V
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BU of 2r8v by Molmil
Native structure of N-acetylglutamate synthase from Neisseria gonorrhoeae
Descriptor: ACETYL COENZYME *A, Putative acetylglutamate synthase
Authors:Shi, D, Sagar, V, Jin, Z, Yu, X, Caldovic, L, Morizono, H, Allewell, N.M, Tuchman, M.
Deposit date:2007-09-11
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
2R98
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Crystal Structure of N-acetylglutamate synthase (selenoMet substituted) from Neisseria gonorrhoeae
Descriptor: ACETYL COENZYME *A, Putative acetylglutamate synthase
Authors:Shi, D, Sagar, V, Jin, Z, Yu, X, Caldovic, L, Morizono, H, Allewell, N.M, Tuchman, M.
Deposit date:2007-09-12
Release date:2008-01-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
1FVO
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BU of 1fvo by Molmil
CRYSTAL STRUCTURE OF HUMAN ORNITHINE TRANSCARBAMYLASE COMPLEXED WITH CARBAMOYL PHOSPHATE
Descriptor: ORNITHINE TRANSCARBAMYLASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
Authors:Shi, D, Morizono, H, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2000-09-20
Release date:2001-04-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.
Biochem.J., 354, 2001

226707

數據於2024-10-30公開中

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