3M7K
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![BU of 3m7k by Molmil](/molmil-images/mine/3m7k) | Crystal structure of PacI-DNA Enzyme product complex | Descriptor: | 1,2-ETHANEDIOL, DNA (5'-D(*GP*AP*GP*GP*CP*TP*TP*AP*AP*T)-3'), DNA (5'-D(P*TP*AP*AP*GP*CP*CP*TP*C)-3'), ... | Authors: | Shen, B.W, Stoddard, B.L. | Deposit date: | 2010-03-16 | Release date: | 2010-04-21 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.92 Å) | Cite: | Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI. Structure, 18, 2010
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5TGX
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![BU of 5tgx by Molmil](/molmil-images/mine/5tgx) | |
1U3E
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![BU of 1u3e by Molmil](/molmil-images/mine/1u3e) | DNA binding and cleavage by the HNH homing endonuclease I-HmuI | Descriptor: | 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 36-MER, ... | Authors: | Shen, B.W, Landthaler, M, Shub, D.A, Stoddard, B.L. | Deposit date: | 2004-07-21 | Release date: | 2004-08-31 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.92 Å) | Cite: | DNA Binding and Cleavage by the HNH Homing Endonuclease I-HmuI. J.Mol.Biol., 342, 2004
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1B0A
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![BU of 1b0a by Molmil](/molmil-images/mine/1b0a) | 5,10, METHYLENE-TETRAHYDROPHOLATE DEHYDROGENASE/CYCLOHYDROLASE FROM E COLI. | Descriptor: | PROTEIN (FOLD BIFUNCTIONAL PROTEIN) | Authors: | Shen, B.W, Dyer, D, Huang, J.-Y, D'Ari, L, Rabinowitz, J, Stoddard, B.L. | Deposit date: | 1998-11-06 | Release date: | 1999-06-29 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.56 Å) | Cite: | The crystal structure of a bacterial, bifunctional 5,10 methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. Protein Sci., 8, 1999
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3S1S
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![BU of 3s1s by Molmil](/molmil-images/mine/3s1s) | Characterization and crystal structure of the type IIG restriction endonuclease BpuSI | Descriptor: | 1,2-ETHANEDIOL, IODIDE ION, MANGANESE (II) ION, ... | Authors: | Shen, B.W, Xu, D, Chan, S.-H, Zheng, Y, Zhu, Y, Xu, S.-Y, Stoddard, B.L. | Deposit date: | 2011-05-16 | Release date: | 2011-07-13 | Last modified: | 2011-10-19 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI. Nucleic Acids Res., 39, 2011
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7LO5
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![BU of 7lo5 by Molmil](/molmil-images/mine/7lo5) | cryoEM structure DrdV-DNA complex | Descriptor: | CALCIUM ION, DNA (27-MER), DNA (28-MER), ... | Authors: | Shen, B.W, Stoddard, B.L. | Deposit date: | 2021-02-09 | Release date: | 2021-03-17 | Last modified: | 2024-03-06 | Method: | ELECTRON MICROSCOPY (2.86 Å) | Cite: | Coordination of phage genome degradation versus host genome protection by a bifunctional restriction-modification enzyme visualized by CryoEM. Structure, 29, 2021
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7LVV
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![BU of 7lvv by Molmil](/molmil-images/mine/7lvv) | cryoEM structure DrdV-DNA complex | Descriptor: | CALCIUM ION, DNA (27-MER), DNA (28-MER), ... | Authors: | Shen, B.W, Stoddard, B.L. | Deposit date: | 2021-02-26 | Release date: | 2021-03-17 | Last modified: | 2024-03-06 | Method: | ELECTRON MICROSCOPY (3.25 Å) | Cite: | Coordination of phage genome degradation versus host genome protection by a bifunctional restriction-modification enzyme visualized by CryoEM. Structure, 29, 2021
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6M9G
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![BU of 6m9g by Molmil](/molmil-images/mine/6m9g) | BbvCI B2 dimer with Ta6Br14 clusters | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, BROMIDE ION, ... | Authors: | Shen, B.W, Stoddard, B.L. | Deposit date: | 2018-08-23 | Release date: | 2018-11-14 | Last modified: | 2024-05-22 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI. Nucleic Acids Res., 47, 2019
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6MAG
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![BU of 6mag by Molmil](/molmil-images/mine/6mag) | native BbvCI B2 dimer in space group C222 | Descriptor: | ACETATE ION, BbvCI endonuclease subunit 2, GLYCEROL, ... | Authors: | Shen, B.W, Stoddard, B.L. | Deposit date: | 2018-08-27 | Release date: | 2018-11-14 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.07 Å) | Cite: | Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI. Nucleic Acids Res., 47, 2019
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1GBN
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![BU of 1gbn by Molmil](/molmil-images/mine/1gbn) | HUMAN ORNITHINE AMINOTRANSFERASE COMPLEXED WITH THE NEUROTOXIN GABACULINE | Descriptor: | 3-AMINOBENZOIC ACID, GABACULINE, ORNITHINE AMINOTRANSFERASE, ... | Authors: | Shah, S.A, Shen, B.W, Brunger, A.T. | Deposit date: | 1997-05-29 | Release date: | 1998-06-03 | Last modified: | 2024-05-22 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Human ornithine aminotransferase complexed with L-canaline and gabaculine: structural basis for substrate recognition. Structure, 5, 1997
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3HYI
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![BU of 3hyi by Molmil](/molmil-images/mine/3hyi) | Crystal structure of full-length DUF199/WhiA from Thermatoga maritima | Descriptor: | GLYCEROL, Protein DUF199/WhiA, SODIUM ION | Authors: | Kaiser, B.K, Clifton, M.C, Shen, B.W, Stoddard, B.L. | Deposit date: | 2009-06-22 | Release date: | 2009-09-01 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.34 Å) | Cite: | The structure of a bacterial DUF199/WhiA protein: domestication of an invasive endonuclease Structure, 17, 2009
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3HYJ
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![BU of 3hyj by Molmil](/molmil-images/mine/3hyj) | Crystal structure of the N-terminal LAGLIDADG domain of DUF199/WhiA | Descriptor: | CHLORIDE ION, GLYCEROL, Protein DUF199/WhiA, ... | Authors: | Kaiser, B.K, Clifton, M.C, Shen, B.W, Stoddard, B.L. | Deposit date: | 2009-06-22 | Release date: | 2009-09-01 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | The structure of a bacterial DUF199/WhiA protein: domestication of an invasive endonuclease. Structure, 17, 2009
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2CAN
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![BU of 2can by Molmil](/molmil-images/mine/2can) | |
1D7P
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![BU of 1d7p by Molmil](/molmil-images/mine/1d7p) | Crystal structure of the c2 domain of human factor viii at 1.5 a resolution at 1.5 A | Descriptor: | COAGULATION FACTOR VIII PRECURSOR, CYSTEINE, GLYCEROL, ... | Authors: | Pratt, K.P, Shen, B.W, Stoddard, B.L. | Deposit date: | 1999-10-19 | Release date: | 1999-12-01 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structure of the C2 domain of human factor VIII at 1.5 A resolution. Nature, 402, 1999
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3U0S
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![BU of 3u0s by Molmil](/molmil-images/mine/3u0s) | Crystal Structure of an Enzyme Redesigned Through Multiplayer Online Gaming: CE6 | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Diisopropyl-fluorophosphatase, GLYCEROL, ... | Authors: | Bale, J.B, Shen, B.W, Stoddard, B.L. | Deposit date: | 2011-09-29 | Release date: | 2012-02-01 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Increased Diels-Alderase activity through backbone remodeling guided by Foldit players. Nat.Biotechnol., 30, 2012
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2R7E
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![BU of 2r7e by Molmil](/molmil-images/mine/2r7e) | Crystal Structure Analysis of Coagulation Factor VIII | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COPPER (II) ION, ... | Authors: | Stoddard, B.L, Shen, B.W. | Deposit date: | 2007-09-07 | Release date: | 2008-04-15 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (3.7 Å) | Cite: | The tertiary structure and domain organization of coagulation factor VIII. Blood, 111, 2008
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