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PDB: 307 件
8CIK
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BU of 8cik by Molmil
Altai wapiti (Cervus elaphus sibiricus) chymosin at 2.2 A resolution
分子名称: Chymosin, GLYCEROL
著者Diusenova, S.E, Shevtsov, M.B, Borshchevskiy, V.I, Belenkaya, S.V, Kolybalov, D.S, Arkhipov, S.G, Volosnikova, E.A, Elchaninov, V.V, Shcherbakov, D.N.
登録日2023-02-09
公開日2023-03-08
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Altai wapiti (Cervus elaphus sibiricus) chymosin at 2.2 A resolution
To Be Published
6J1K
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BU of 6j1k by Molmil
Crystal structure of ribose-5-phosphate isomerase A from Ochrobactrum sp. CSL1
分子名称: DI(HYDROXYETHYL)ETHER, Ribose-5-phosphate isomerase A
著者Xu, X.Q, Mo, X.B, Ju, X, Shen, M, Li, L.Z, Yuan, A.Y.
登録日2018-12-28
公開日2019-04-17
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.824 Å)
主引用文献Crystal structure of ribose-5-phosphate isomerase A from Ochrobactrum sp. CSL1
To be published
6ODJ
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BU of 6odj by Molmil
PolyAla Model of the PRC from the Type 4 Secretion System of H. pylori
分子名称: PolyAla Model of PRC from H.pylori
著者Chung, J.M, Sheedlo, M.J, Campbell, A, Sawhney, N, Frick-Cheng, A.E, Lacy, D.B, Cover, T.L, Ohi, M.D.
登録日2019-03-26
公開日2019-07-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of the Helicobacter pylori Cag type IV secretion system.
Elife, 8, 2019
6OEG
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BU of 6oeg by Molmil
Structure of CagX from a cryo-EM reconstruction of a T4SS
分子名称: Type IV secretion system apparatus protein CagX
著者Chung, J.M, Sheedlo, M.J, Campbell, A, Sawhney, N, Frick-Cheng, A.E, Lacy, D.B, Cover, T.L, Ohi, M.D.
登録日2019-03-27
公開日2019-07-03
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the Helicobacter pylori Cag type IV secretion system.
Elife, 8, 2019
6OEH
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BU of 6oeh by Molmil
PolyAla Model of OMCC I-Layer
分子名称: PolyAla Model of OMCC I-Layer
著者Chung, J.M, Sheedlo, M.J, Campbell, A, Sawhney, N, Frick-Cheng, A.E, Lacy, D.B, Cover, T.L, Ohi, M.D.
登録日2019-03-27
公開日2019-07-03
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the Helicobacter pylori Cag type IV secretion system.
Elife, 8, 2019
6OEF
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BU of 6oef by Molmil
PolyAla Model of the O-layer from the Type 4 Secretion System of H. pylori
分子名称: PolyAla Model of OMCC O-Layer
著者Chung, J.M, Sheedlo, M.J, Campbell, A, Sawhney, N, Frick-Cheng, A.E, Lacy, D.B, Cover, T.L, Ohi, M.D.
登録日2019-03-27
公開日2019-07-03
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the Helicobacter pylori Cag type IV secretion system.
Elife, 8, 2019
6ODI
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BU of 6odi by Molmil
Structure of CagY from a cryo-EM reconstruction of a T4SS
分子名称: Type IV secretion system apparatus protein CagY
著者Chung, J.M, Sheedlo, M.J, Campbell, A, Sawhney, N, Frick-Cheng, A.E, Lacy, D.B, Cover, T.L, Ohi, M.D.
登録日2019-03-26
公開日2019-07-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the Helicobacter pylori Cag type IV secretion system.
Elife, 8, 2019
5SVM
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BU of 5svm by Molmil
Crystal structure of the ATP-gated human P2X3 ion channel bound to agonist 2-methylthio-ATP in the desensitized state
分子名称: 1,2-ETHANEDIOL, 2-(methylsulfanyl)adenosine 5'-(tetrahydrogen triphosphate), 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
登録日2016-08-06
公開日2016-09-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.093 Å)
主引用文献X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016
5U4I
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BU of 5u4i by Molmil
Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Zeng, F, Chen, Y, Remis, J, Shekhar, M, Phillips, J.C, Tajkhorshid, E, Jin, H.
登録日2016-12-04
公開日2017-01-11
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis of co-translational quality control by ArfA and RF2 bound to ribosome.
Nature, 541, 2017
5SVP
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BU of 5svp by Molmil
Anomalous sulfur signal reveals the position of agonist 2-methylthio-ATP bound to the ATP-gated human P2X3 ion channel in the desensitized state
分子名称: 1,2-ETHANEDIOL, 2-(methylsulfanyl)adenosine 5'-(tetrahydrogen triphosphate), 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
登録日2016-08-07
公開日2016-09-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.298 Å)
主引用文献X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016
5SVK
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BU of 5svk by Molmil
Crystal structure of the ATP-gated human P2X3 ion channel in the ATP-bound, open state
分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
登録日2016-08-06
公開日2016-09-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.773 Å)
主引用文献X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016
5SVL
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BU of 5svl by Molmil
Crystal structure of the ATP-gated human P2X3 ion channel in the ATP-bound, closed (desensitized) state
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
登録日2016-08-06
公開日2016-10-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016
7K9P
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BU of 7k9p by Molmil
Room temperature structure of NSP15 Endoribonuclease from SARS CoV-2 solved using SFX.
分子名称: CITRIC ACID, Uridylate-specific endoribonuclease
著者Botha, S, Jernigan, R, Chen, J, Coleman, M.A, Frank, M, Grant, T.D, Hansen, D.T, Ketawala, G, Logeswaran, D, Martin-Garcia, J, Nagaratnam, N, Raj, A.L.L.X, Shelby, M, Yang, J.-H, Yung, M.C, Fromme, P.
登録日2020-09-29
公開日2020-10-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Room-temperature structural studies of SARS-CoV-2 protein NendoU with an X-ray free-electron laser.
Structure, 2022
6O2N
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BU of 6o2n by Molmil
CDTb Double Heptamer Short Form Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
分子名称: ADP-ribosyltransferase binding component
著者Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
登録日2019-02-24
公開日2019-10-30
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6O2M
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BU of 6o2m by Molmil
CDTb Double Heptamer Long Form Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
分子名称: ADP-ribosyltransferase binding component
著者Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
登録日2019-02-24
公開日2019-10-30
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (6.3 Å)
主引用文献Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6OKS
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BU of 6oks by Molmil
CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
分子名称: ADP-ribosyltransferase binding component
著者Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
登録日2019-04-15
公開日2019-10-30
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6O2O
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BU of 6o2o by Molmil
CDTb Double Heptamer Short Form Modeled from Cryo-EM Map Reconstructed using C1 Symmetry
分子名称: ADP-ribosyltransferase binding component
著者Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
登録日2019-02-24
公開日2019-10-30
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.53 Å)
主引用文献Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6OKT
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BU of 6okt by Molmil
CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
分子名称: ADP-ribosyltransferase binding component
著者Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
登録日2019-04-15
公開日2019-10-30
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
7VW7
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BU of 7vw7 by Molmil
Crystal structure of the 2 ADP-AlF4-bound V1 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Suzuki, K, Shekhar, M, Gupta, C, Singharoy, A, Murata, T.
登録日2021-11-09
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.818 Å)
主引用文献Revealing a Hidden Intermediate of Rotatory Catalysis with X-ray Crystallography and Molecular Simulations.
Acs Cent.Sci., 8, 2022
6OKU
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BU of 6oku by Molmil
CDTb Double Heptamer Long Form Mask 3 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
分子名称: ADP-ribosyltransferase binding component
著者Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
登録日2019-04-15
公開日2019-10-30
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
5FDL
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BU of 5fdl by Molmil
Crystal Structure of K103N/Y181C Mutant HIV-1 Reverse Transcriptase (RT) in Complex with IDX899
分子名称: P51 Reverse transcriptase, P66 Reverse transcriptase, methyl (R)-(2-carbamoyl-5-chloro-1H-indol-3-yl)[3-(2-cyanoethyl)-5-methylphenyl]phosphinate
著者Dousson, C.B, Alexandre, F.-R, Convard, T, Fisher, M, Lamers, M.B.A.C, Leonard, P.M.
登録日2015-12-16
公開日2016-02-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Discovery of the Aryl-phospho-indole IDX899, a Highly Potent Anti-HIV Non-nucleoside Reverse Transcriptase Inhibitor.
J.Med.Chem., 59, 2016
5SVJ
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BU of 5svj by Molmil
Crystal structure of the ATP-gated human P2X3 ion channel in the closed, apo state
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, ...
著者Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
登録日2016-08-06
公開日2016-09-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.984 Å)
主引用文献X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016
6CXB
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BU of 6cxb by Molmil
Structure of N-truncated R1-type pyocin tail fiber at 1.7 angstrom resolution
分子名称: GLYCEROL, MAGNESIUM ION, R1-type pyocin tail fiber protein
著者Salazar, A.J, Sherekar, M, Saccettini, J.C.
登録日2018-04-02
公開日2019-02-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献R pyocin tail fiber structure reveals a receptor-binding domain with a lectin fold.
PLoS ONE, 14, 2019
6CU2
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Structure of N-truncated R2-type pyocin tail fiber at 2.6 angstrom resolution
分子名称: MAGNESIUM ION, NICKEL (II) ION, R2-type pyocin
著者Salazar, A.J, Sherekar, M, Saccettini, J.C.
登録日2018-03-23
公開日2019-02-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献R pyocin tail fiber structure reveals a receptor-binding domain with a lectin fold.
PLoS ONE, 14, 2019
5SVQ
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Crystal structure of the ATP-gated human P2X3 ion channel bound to competitive antagonist TNP-ATP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, P2X purinoceptor 3, ...
著者Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
登録日2016-08-07
公開日2016-10-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016

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